메뉴 건너뛰기




Volumn 133, Issue 1, 1996, Pages 183-195

The choice of molecular marker methods for population genetic studies of plant pathogens

Author keywords

Clones; Erysiphe graminis f. sp. hordei (barley powdery mildew); Genetic fingerprinting; Molecular markers; Population structure

Indexed keywords


EID: 0003373385     PISSN: 0028646X     EISSN: None     Source Type: Journal    
DOI: 10.1111/j.1469-8137.1996.tb04353.x     Document Type: Article
Times cited : (89)

References (75)
  • 1
    • 0028209453 scopus 로고
    • The use of RAPD markers in the genetic analysis of the plant pathogenic fungus Cladosporium fulvum
    • Arnau J, Housego AP, Oliver RP. 1994. The use of RAPD markers in the genetic analysis of the plant pathogenic fungus Cladosporium fulvum. Current Genetics 25: 438-444.
    • (1994) Current Genetics , vol.25 , pp. 438-444
    • Arnau, J.1    Housego, A.P.2    Oliver, R.P.3
  • 2
    • 0027141845 scopus 로고
    • Gene flow between geographic populations of Mycosphaerella graminocola (anamorph Septoria tritici) detected with restriction fragment length polymorphism markers
    • Boeger JM, Chen RS, McDonald BA. 1993. Gene flow between geographic populations of Mycosphaerella graminocola (anamorph Septoria tritici) detected with restriction fragment length polymorphism markers. Phytopathology 83: 1148-1154.
    • (1993) Phytopathology , vol.83 , pp. 1148-1154
    • Boeger, J.M.1    Chen, R.S.2    McDonald, B.A.3
  • 4
    • 0001833171 scopus 로고
    • DNA fingerprinting in clonal organisms
    • Brookfield JFY. 1992. DNA fingerprinting in clonal organisms. Molecular Ecology 1: 21-26.
    • (1992) Molecular Ecology , vol.1 , pp. 21-26
    • Brookfield, J.F.Y.1
  • 5
    • 0027967336 scopus 로고
    • Chance and selection in the evolution of barley mildew
    • Brown JKM. 1994, Chance and selection in the evolution of barley mildew. Trends in Microbiology 2: 470-475.
    • (1994) Trends in Microbiology , vol.2 , pp. 470-475
    • Brown, J.K.M.1
  • 6
    • 0001774558 scopus 로고
    • Pathogens' responses to the management of disease resistance genes
    • Brown JKM. 1995a. Pathogens' responses to the management of disease resistance genes. Advances in Plant Pathology 11: 75-102.
    • (1995) Advances in Plant Pathology , vol.11 , pp. 75-102
    • Brown, J.K.M.1
  • 7
    • 0028981957 scopus 로고
    • Recombination and selection in populations of plant pathogens
    • Brown JKM. 1995b. Recombination and selection in populations of plant pathogens. Plant Pathology 44: 279-293.
    • (1995) Plant Pathology , vol.44 , pp. 279-293
    • Brown, J.K.M.1
  • 9
    • 84986992479 scopus 로고
    • The use of DNA polymorphisms to test hypotheses about a population of Erysiphe graminis f. sp. hordei
    • Brown JKM, O'Dell M, Simpson CG, Wolfe MS. 1990. The use of DNA polymorphisms to test hypotheses about a population of Erysiphe graminis f. sp. hordei. Plant Pathology 39: 391-401.
    • (1990) Plant Pathology , vol.39 , pp. 391-401
    • Brown, J.K.M.1    O'Dell, M.2    Simpson, C.G.3    Wolfe, M.S.4
  • 10
    • 0028234690 scopus 로고
    • Genetic analysis of DNA fingerprints and virulences in Erysiphe graminis f. sp. hordei
    • Brown JKM, Simpson CG. 1994. Genetic analysis of DNA fingerprints and virulences in Erysiphe graminis f. sp. hordei. Current Genetics 26: 172-178.
    • (1994) Current Genetics , vol.26 , pp. 172-178
    • Brown, J.K.M.1    Simpson, C.G.2
  • 11
    • 84987013904 scopus 로고
    • Adaptation of barley powdery mildew populations in England to varieties with two resistance genes
    • Brown JKM, Simpson CG, Wolfe MS. 1993. Adaptation of barley powdery mildew populations in England to varieties with two resistance genes. Plant Pathology 42: 108-115.
    • (1993) Plant Pathology , vol.42 , pp. 108-115
    • Brown, J.K.M.1    Simpson, C.G.2    Wolfe, M.S.3
  • 12
    • 84986958392 scopus 로고
    • Structure and evolution of a population of Erysiphe graminis f. sp. hordei
    • Brown JKM, Wolfe MS. 1990. Structure and evolution of a population of Erysiphe graminis f. sp. hordei. Plant Pathology 39: 376-390.
    • (1990) Plant Pathology , vol.39 , pp. 376-390
    • Brown, J.K.M.1    Wolfe, M.S.2
  • 13
    • 0027975332 scopus 로고
    • Genetic stability in a population of a plant pathogenic fungus over time
    • Chen RS, Boeger JM, McDonald BA. 1994. Genetic stability in a population of a plant pathogenic fungus over time. Molecular Ecology 3: 209-218.
    • (1994) Molecular Ecology , vol.3 , pp. 209-218
    • Chen, R.S.1    Boeger, J.M.2    McDonald, B.A.3
  • 15
    • 0030512418 scopus 로고    scopus 로고
    • Genetic variation in Danish populations of Erysiphe graminis f. sp. hordei: Estimation of genetic diversity and effective population size using RFLP data
    • in press
    • Damgaard C, Giese H. 1996. Genetic variation in Danish populations of Erysiphe graminis f. sp. hordei: estimation of genetic diversity and effective population size using RFLP data. Plant Pathology, in press.
    • (1996) Plant Pathology
    • Damgaard, C.1    Giese, H.2
  • 16
    • 0000485878 scopus 로고
    • Template mixing - A method of enhancing detection and interpretation of codominant RAPD markers
    • Davis TM, Yu H, Haigis KM, McGowan PJ. 1995. Template mixing - a method of enhancing detection and interpretation of codominant RAPD markers. Theoretical and Applied Genetics 91: 582-588.
    • (1995) Theoretical and Applied Genetics , vol.91 , pp. 582-588
    • Davis, T.M.1    Yu, H.2    Haigis, K.M.3    McGowan, P.J.4
  • 17
    • 19744377909 scopus 로고
    • The use of random amplified polymorphic DNA markers in wheat
    • Devos KM, Gale MD. 1992. The use of random amplified polymorphic DNA markers in wheat. Theoretical and Applied Genetics 84: 567-572.
    • (1992) Theoretical and Applied Genetics , vol.84 , pp. 567-572
    • Devos, K.M.1    Gale, M.D.2
  • 19
    • 0027145298 scopus 로고
    • Genotypic diversity of Phytophthora infestons in the Netherlands, revealed by DNA polymorphisms
    • Drenth A, Goodwin SB, Fry WE, Davidse LC. 1993. Genotypic diversity of Phytophthora infestons in the Netherlands, revealed by DNA polymorphisms. Phytopathology 83: 1087-1092.
    • (1993) Phytopathology , vol.83 , pp. 1087-1092
    • Drenth, A.1    Goodwin, S.B.2    Fry, W.E.3    Davidse, L.C.4
  • 20
    • 0028121612 scopus 로고
    • DNA fingerprinting uncovers a new sexually reproducing population of Phytophthora infestons in the Netherlands
    • Drenth A, Tas ICQ, Covers F. 1994. DNA fingerprinting uncovers a new sexually reproducing population of Phytophthora infestons in the Netherlands. European Journal of Plant Pathology 100: 97-107.
    • (1994) European Journal of Plant Pathology , vol.100 , pp. 97-107
    • Drenth, A.1    Tas, I.C.Q.2    Covers, F.3
  • 24
    • 0028054475 scopus 로고
    • Migration from northern Mexico as the probable cause of recent genetic changes in populations of Phytophthora infestans in the United States and Canada
    • Goodwin SB, Cohen BA, Deahl KL, Fry WE. 1994a. Migration from northern Mexico as the probable cause of recent genetic changes in populations of Phytophthora infestans in the United States and Canada. Phytopathology 84: 553-558.
    • (1994) Phytopathology , vol.84 , pp. 553-558
    • Goodwin, S.B.1    Cohen, B.A.2    Deahl, K.L.3    Fry, W.E.4
  • 26
    • 0026770294 scopus 로고
    • Cloning and genetic analyses of two highly polymorphic, moderately repetitive nuclear DNAs from Phytophthora infestans
    • Goodwin SB, Drenth A, Fry WE. 1992a. Cloning and genetic analyses of two highly polymorphic, moderately repetitive nuclear DNAs from Phytophthora infestans. Current Genetics 22: 107-115.
    • (1992) Current Genetics , vol.22 , pp. 107-115
    • Goodwin, S.B.1    Drenth, A.2    Fry, W.E.3
  • 27
    • 0000905239 scopus 로고
    • Clonal diversity and genetic differentiation of Phytophthora infestons populations in northern and central Mexico
    • Goodwin SB, Spielman LJ, Matuszak JM, Bergeron SN, Fry WE. 1992b. Clonal diversity and genetic differentiation of Phytophthora infestons populations in northern and central Mexico. Phytopathology 82: 955-961.
    • (1992) Phytopathology , vol.82 , pp. 955-961
    • Goodwin, S.B.1    Spielman, L.J.2    Matuszak, J.M.3    Bergeron, S.N.4    Fry, W.E.5
  • 28
    • 0029110799 scopus 로고
    • Direct detection of gene flow and probable sexual reproduction of Phytophthora infestans in northern North America
    • Goodwin SB, Sujkowski LS, Dyer AT, Fry BA, Fry WE. 1995a. Direct detection of gene flow and probable sexual reproduction of Phytophthora infestans in northern North America. Phytopathology 85: 473-479.
    • (1995) Phytopathology , vol.85 , pp. 473-479
    • Goodwin, S.B.1    Sujkowski, L.S.2    Dyer, A.T.3    Fry, B.A.4    Fry, W.E.5
  • 29
    • 0028895930 scopus 로고
    • Rapid evolution of pathogenicity within clonal lineages of the potato late blight disease fungus
    • Goodwin SB, Sujkowski LS, Fry WE. 1995b. Rapid evolution of pathogenicity within clonal lineages of the potato late blight disease fungus. Phytopathology 85: 669-676.
    • (1995) Phytopathology , vol.85 , pp. 669-676
    • Goodwin, S.B.1    Sujkowski, L.S.2    Fry, W.E.3
  • 30
    • 85007320774 scopus 로고
    • Fstat v-1.2 : A computer program to calculate F-statistics
    • Goudet J. 1995. Fstat v-1.2 : a computer program to calculate F-statistics. Journal of Heredity 86: 485-486.
    • (1995) Journal of Heredity , vol.86 , pp. 485-486
    • Goudet, J.1
  • 31
    • 0027981093 scopus 로고
    • Genetic diversity in Cronartium quercuum f. sp. fusiforme on loblolly pines in southern US
    • Hamelin RC, Doudrick RL, Nance WL. 1994. Genetic diversity in Cronartium quercuum f. sp. fusiforme on loblolly pines in southern US. Current Genetics 26: 359-363.
    • (1994) Current Genetics , vol.26 , pp. 359-363
    • Hamelin, R.C.1    Doudrick, R.L.2    Nance, W.L.3
  • 34
    • 0027236593 scopus 로고
    • A genetic survey of the pathogenic fungus Ophiostoma ulmi across a Dutch elm disease front in western Canada
    • Hintz WE, Jeng RS, Yang DQ, Hubbes MM, Horgen PA. 1993. A genetic survey of the pathogenic fungus Ophiostoma ulmi across a Dutch elm disease front in western Canada. Genome 36: 418-426.
    • (1993) Genome , vol.36 , pp. 418-426
    • Hintz, W.E.1    Jeng, R.S.2    Yang, D.Q.3    Hubbes, M.M.4    Horgen, P.A.5
  • 35
    • 0029187616 scopus 로고
    • Comparison of mobile and stationary spore-sampling techniques for estimating virulence frequencies in aerial barley powdery mildew populations
    • Hovmøller M, Munk L, Østergård H. 1995. Comparison of mobile and stationary spore-sampling techniques for estimating virulence frequencies in aerial barley powdery mildew populations. Plant Pathology 44: 829-837.
    • (1995) Plant Pathology , vol.44 , pp. 829-837
    • Hovmøller, M.1    Munk, L.2    Østergård, H.3
  • 39
    • 0000734847 scopus 로고
    • Local and trans-Canadian clonal distribution of Sclerotinia sclerotiorum on canola
    • Kohli Y, Morrall RAA, Anderson JB, Kohn LM. 1992. Local and trans-Canadian clonal distribution of Sclerotinia sclerotiorum on canola. Phytopathology 82: 875-880.
    • (1992) Phytopathology , vol.82 , pp. 875-880
    • Kohli, Y.1    Morrall, R.A.A.2    Anderson, J.B.3    Kohn, L.M.4
  • 40
    • 0001205243 scopus 로고
    • Enzyme polymorphism and genetic drift among geographic isolates of the rice blast fungus
    • Leung H, Williams PH. 1986. Enzyme polymorphism and genetic drift among geographic isolates of the rice blast fungus. Phytopathology 76: 778-783.
    • (1986) Phytopathology , vol.76 , pp. 778-783
    • Leung, H.1    Williams, P.H.2
  • 42
    • 0002124081 scopus 로고
    • DNA fingerprinting with a dispersed repeated sequence resolves pathotype diversity in the rice blast fungus
    • Levy M, Romao J, Marchetti MA, Hamer JE. 1991. DNA fingerprinting with a dispersed repeated sequence resolves pathotype diversity in the rice blast fungus. Plant Cell 3: 95-102.
    • (1991) Plant Cell , vol.3 , pp. 95-102
    • Levy, M.1    Romao, J.2    Marchetti, M.A.3    Hamer, J.E.4
  • 43
    • 0028406882 scopus 로고
    • Analysis of population genetic structure with RAPD markers
    • Lynch M, Milligan BG. 1994. Analysis of population genetic structure with RAPD markers. Molecular Ecology 3: 91-99.
    • (1994) Molecular Ecology , vol.3 , pp. 91-99
    • Lynch, M.1    Milligan, B.G.2
  • 45
    • 0000853792 scopus 로고
    • DNA restriction fragment length polymorphisms among Mycosphaerella graminicola (anamorph Septoria tritici) isolates collected from a single wheat field
    • McDonald BA, Martinez JP. 1990. DNA restriction fragment length polymorphisms among Mycosphaerella graminicola (anamorph Septoria tritici) isolates collected from a single wheat field. Phytopathology 80: 1368-1373.
    • (1990) Phytopathology , vol.80 , pp. 1368-1373
    • McDonald, B.A.1    Martinez, J.P.2
  • 46
    • 0000315903 scopus 로고
    • DNA fingerprinting of the plant pathogenic fungus Mycosphaerellà graminicola (anamorph Septoria tritici)
    • McDonald BA, Martinez JP. 1991. DNA fingerprinting of the plant pathogenic fungus Mycosphaerellà graminicola (anamorph Septoria tritici). Experimental Mycology 15: 146-158.
    • (1991) Experimental Mycology , vol.15 , pp. 146-158
    • McDonald, B.A.1    Martinez, J.P.2
  • 47
    • 0029140709 scopus 로고
    • Population differentiation in the chestnut blight fungus, Cryphonectria parasitica, in eastern North America
    • Milgroom MG, Lipari SE. 1995. Population differentiation in the chestnut blight fungus, Cryphonectria parasitica, in eastern North America. Phytopathology 85: 155-160.
    • (1995) Phytopathology , vol.85 , pp. 155-160
    • Milgroom, M.G.1    Lipari, S.E.2
  • 48
    • 84966166205 scopus 로고
    • Estimation of the outcrossing rate in the chestnut blight fungus, Cryphonectria parasitica
    • Milgroom MG, Lipari SE, Ennos RA, Liu YC. 1993. Estimation of the outcrossing rate in the chestnut blight fungus, Cryphonectria parasitica. Heredity 70: 385-392.
    • (1993) Heredity , vol.70 , pp. 385-392
    • Milgroom, M.G.1    Lipari, S.E.2    Ennos, R.A.3    Liu, Y.C.4
  • 49
    • 0026747091 scopus 로고
    • DNA fingerprinting and analysis of population structure in the chestnut blight fungus, Cryphonectria parasitica
    • Milgroom MG, Lipari SE, Powell WA. 1992. DNA fingerprinting and analysis of population structure in the chestnut blight fungus, Cryphonectria parasitica. Genetics 131: 297-306.
    • (1992) Genetics , vol.131 , pp. 297-306
    • Milgroom, M.G.1    Lipari, S.E.2    Powell, W.A.3
  • 51
    • 0018147653 scopus 로고
    • Estimation of average heterozygosity and genetic distance from a small number of individuals
    • Nei M. 1978. Estimation of average heterozygosity and genetic distance from a small number of individuals. Genetics 89: 583-590.
    • (1978) Genetics , vol.89 , pp. 583-590
    • Nei, M.1
  • 53
    • 0020954623 scopus 로고
    • Estimation of fixation indices and gene diversities
    • Nei M, Chesser RK. 1983. Estimation of fixation indices and gene diversities. Annals of Human Genetics 47: 253-259.
    • (1983) Annals of Human Genetics , vol.47 , pp. 253-259
    • Nei, M.1    Chesser, R.K.2
  • 54
    • 84985469787 scopus 로고
    • Variation for isozymes and double-stranded RNA among isolates of Puccinia striiformis and two other cereal rusts
    • Newton AC, Caten CE, Johnson R. 1985. Variation for isozymes and double-stranded RNA among isolates of Puccinia striiformis and two other cereal rusts. Plant Pathology 34: 235-247.
    • (1985) Plant Pathology , vol.34 , pp. 235-247
    • Newton, A.C.1    Caten, C.E.2    Johnson, R.3
  • 55
    • 84987013581 scopus 로고
    • Comparison of cultural, morphological and DNA markers for the classification of Pseudocercosporella herpotrichoides
    • Nicholson P, Hollins TW, Rezanoor HN, Anamthawat-Jónsson KA. 1991. Comparison of cultural, morphological and DNA markers for the classification of Pseudocercosporella herpotrichoides. Plant Pathology 40: 584-594.
    • (1991) Plant Pathology , vol.40 , pp. 584-594
    • Nicholson, P.1    Hollins, T.W.2    Rezanoor, H.N.3    Anamthawat-Jónsson, K.A.4
  • 56
    • 0028119371 scopus 로고
    • The use of random amplified polymorphic DNA to identify pathotype and detect variation in Pseudocercosporella herpotrichoides
    • Nicholson P, Rezanoor HN. 1994. The use of random amplified polymorphic DNA to identify pathotype and detect variation in Pseudocercosporella herpotrichoides. Mycological Research 98: 13-21.
    • (1994) Mycological Research , vol.98 , pp. 13-21
    • Nicholson, P.1    Rezanoor, H.N.2
  • 57
    • 0024756969 scopus 로고
    • Rapid and sensitive detection of point mutations and DNA polymorphisms using the polymerase chain reaction
    • Orita M, Suzuki Y, Sekiya T, Hayashi K. 1989. Rapid and sensitive detection of point mutations and DNA polymorphisms using the polymerase chain reaction. Genomics 5: 874-879.
    • (1989) Genomics , vol.5 , pp. 874-879
    • Orita, M.1    Suzuki, Y.2    Sekiya, T.3    Hayashi, K.4
  • 58
    • 0026278232 scopus 로고
    • Gametic disequilibria between virulence genes in barley powdery mildew populations in relation to selection and recombination
    • Østergård H, Hovmøller M. 1991. Gametic disequilibria between virulence genes in barley powdery mildew populations in relation to selection and recombination. Plant Pathology 40: 166-177.
    • (1991) Plant Pathology , vol.40 , pp. 166-177
    • Østergård, H.1    Hovmøller, M.2
  • 60
    • 0028816747 scopus 로고
    • A measure of population subdivision based on microsatellite allele frequencies
    • Slatkin, M. 1995. A measure of population subdivision based on microsatellite allele frequencies. Genetics 139: 457-462.
    • (1995) Genetics , vol.139 , pp. 457-462
    • Slatkin, M.1
  • 62
    • 0027975878 scopus 로고
    • Increased genotypic diversity via migration and possible occurrence of sexual reproduction of Phytophthora infestans in Poland
    • Sujkowski LS, Goodwin SB, Dyer AT, Fry WE. 1994. Increased genotypic diversity via migration and possible occurrence of sexual reproduction of Phytophthora infestans in Poland. Phytopathology 84: 201-207.
    • (1994) Phytopathology , vol.84 , pp. 201-207
    • Sujkowski, L.S.1    Goodwin, S.B.2    Dyer, A.T.3    Fry, W.E.4
  • 63
    • 0024387394 scopus 로고
    • Hypervariability of simple sequences as a general source for polymorphic DNA markers
    • Tautz D. 1989. Hypervariability of simple sequences as a general source for polymorphic DNA markers. Nucleic Acids Research 17: 6463-6471.
    • (1989) Nucleic Acids Research , vol.17 , pp. 6463-6471
    • Tautz, D.1
  • 64
    • 0029110671 scopus 로고
    • Reproducibility of RAPD fingerprinting of 3 basidiomycete fungi, Laccaria, Hydnangium and Rhizoctonia
    • Tommerup IC, Barton JE, O'Brien PA. 1995. Reproducibility of RAPD fingerprinting of 3 basidiomycete fungi, Laccaria, Hydnangium and Rhizoctonia. Mycological Research 99: 179-186.
    • (1995) Mycological Research , vol.99 , pp. 179-186
    • Tommerup, I.C.1    Barton, J.E.2    O'Brien, P.A.3
  • 67
    • 0001943988 scopus 로고
    • The failure of Pearson's goodness of fit statistic
    • Williams K. 1976. The failure of Pearson's goodness of fit statistic. The Statistician 25: 49.
    • (1976) The Statistician , vol.25 , pp. 49
    • Williams, K.1
  • 70
    • 85032069976 scopus 로고
    • Populations of plant pathogens: Some constraints on analysis of variation in pathogenicity
    • Wolfe MS, Knott DR. 1982. Populations of plant pathogens: some constraints on analysis of variation in pathogenicity. Plant Pathology 31: 79-90.
    • (1982) Plant Pathology , vol.31 , pp. 79-90
    • Wolfe, M.S.1    Knott, D.R.2
  • 71
    • 0028003097 scopus 로고
    • Population genetics of plant pathogen interactions: The example of the Erysiphe graminis-Hordeum vulgare pathosystem
    • Wolfe MS, McDermott JM. 1994. Population genetics of plant pathogen interactions: the example of the Erysiphe graminis-Hordeum vulgare pathosystem. Annual Review of Phytopathology 32: 89-113.
    • (1994) Annual Review of Phytopathology , vol.32 , pp. 89-113
    • Wolfe, M.S.1    McDermott, J.M.2
  • 72
    • 0014712045 scopus 로고
    • Population studies on southwestern Indian tribes. II. Local genetic differentiation in the Papago
    • Workman PL, Niswander JD. 1970. Population studies on southwestern Indian tribes. II. Local genetic differentiation in the Papago. American Journal of Human Genetics 22: 24-49.
    • (1970) American Journal of Human Genetics , vol.22 , pp. 24-49
    • Workman, P.L.1    Niswander, J.D.2
  • 73
    • 0001024012 scopus 로고
    • Isolation by distance
    • Wright S. 1943. Isolation by distance. Genetics 28: 114-138.
    • (1943) Genetics , vol.28 , pp. 114-138
    • Wright, S.1
  • 74
    • 0027130328 scopus 로고
    • DNA fingerprinting to examine microgeographic variation in the Magnaporthe grisea (Pyricularia grisea) population in two rice fields in Arkansas
    • Xia JQ, Correll JC, Lee FN, Marchetti MA, Rhoads DD. 1993. DNA fingerprinting to examine microgeographic variation in the Magnaporthe grisea (Pyricularia grisea) population in two rice fields in Arkansas. Phytopathology 83: 1029-1035.
    • (1993) Phytopathology , vol.83 , pp. 1029-1035
    • Xia, J.Q.1    Correll, J.C.2    Lee, F.N.3    Marchetti, M.A.4    Rhoads, D.D.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.