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Volumn 30, Issue 21, 2002, Pages 4740-4750

1H NMR determination of base-pair lifetimes in oligonucleotides containing single base mismatches

Author keywords

[No Author keywords available]

Indexed keywords

ADENINE; CYTOSINE; GUANINE; OLIGONUCLEOTIDE; PROTON; THYMINE; OLIGODEOXYRIBONUCLEOTIDE;

EID: 0036827022     PISSN: 03051048     EISSN: None     Source Type: Journal    
DOI: 10.1093/nar/gkf601     Document Type: Article
Times cited : (69)

References (61)
  • 2
    • 0024330686 scopus 로고
    • Single base mismatches in DNA. Long- and short-range structure probed by analysis of axis trajectory and local chemical reactivity
    • Bhattacharyya, A. and Lilley, D.M. (1989) Single base mismatches in DNA. Long- and short-range structure probed by analysis of axis trajectory and local chemical reactivity. J. Mol. Biol., 209, 583-597.
    • (1989) J. Mol. Biol , vol.209 , pp. 583-597
    • Bhattacharyya, A.1    Lilley, D.M.2
  • 3
    • 0025018374 scopus 로고
    • Structural and thermodynamic studies on the adenine guanine mismatch in B-DNA
    • Leonard, G.A., Booth, E.D. and Brown, T. (1990) Structural and thermodynamic studies on the adenine guanine mismatch in B-DNA. Nucleic Acids Res., 18, 5617-5623.
    • (1990) Nucleic Acids Res , vol.18 , pp. 5617-5623
    • Leonard, G.A.1    Booth, E.D.2    Brown, T.3
  • 4
    • 0028783875 scopus 로고
    • Influence of the oxidatively damaged adduct 8-oxodeoxyguanosine on the conformation, energetics, and thermodynamic stability of a DNA duplex
    • Plum, G.E., Grollman, A.P., Johnson, F. and Breslauer, K.J. (1995) Influence of the oxidatively damaged adduct 8-oxodeoxyguanosine on the conformation, energetics, and thermodynamic stability of a DNA duplex. Biochemistry, 34, 16148-16160.
    • (1995) Biochemistry , vol.34 , pp. 16148-16160
    • Plum, G.E.1    Grollman, A.P.2    Johnson, F.3    Breslauer, K.J.4
  • 5
    • 0002689224 scopus 로고
    • Mismatches and mutagenic lesions in nucleic acids
    • Brown, T. (1995) Mismatches and mutagenic lesions in nucleic acids. Aldrichimica Acta, 28, 15-20.
    • (1995) Aldrichimica Acta , vol.28 , pp. 15-20
    • Brown, T.1
  • 6
    • 0027278557 scopus 로고
    • Instability and decay of the primary structure of DNA
    • Lindahl, T. (1993) Instability and decay of the primary structure of DNA. Nature, 362, 709-715.
    • (1993) Nature , vol.362 , pp. 709-715
    • Lindahl, T.1
  • 7
    • 0033953141 scopus 로고    scopus 로고
    • DNA repair: Models for damage and mismatch recognition
    • Rajski, S.R., Jackson, B.A. and Barton, J.K. (2000) DNA repair: models for damage and mismatch recognition. Mutat. Res., 447, 49-72.
    • (2000) Mutat. Res , vol.447 , pp. 49-72
    • Rajski, S.R.1    Jackson, B.A.2    Barton, J.K.3
  • 8
    • 0029784320 scopus 로고    scopus 로고
    • Biochemistry and genetics of eukaryotic mismatch repair
    • Kolodner, R. (1996) Biochemistry and genetics of eukaryotic mismatch repair. Genes Dev., 10, 1433-1442.
    • (1996) Genes Dev , vol.10 , pp. 1433-1442
    • Kolodner, R.1
  • 9
    • 0026355962 scopus 로고
    • Mechanisms and biological effects of mismatch repair
    • Modrich, P. (1991) Mechanisms and biological effects of mismatch repair. Annu. Rev. Genet., 25, 229-253.
    • (1991) Annu. Rev. Genet , vol.25 , pp. 229-253
    • Modrich, P.1
  • 10
    • 0022263018 scopus 로고
    • High-resolution structure of a DNA helix containing mismatched base pairs
    • Brown, T., Kennard, O., Kneale, G. and Rabinovich, D. (1985) High-resolution structure of a DNA helix containing mismatched base pairs. Nature, 315, 604-606.
    • (1985) Nature , vol.315 , pp. 604-606
    • Brown, T.1    Kennard, O.2    Kneale, G.3    Rabinovich, D.4
  • 11
    • 0023664744 scopus 로고
    • The structure of guanosine-thymidine mismatches in B-DNA at 2.5 Å resolution
    • Hunter, W.N., Brown, T., Kneale, G., Anand, N.N., Rabinovich, D. and Kennard, O. (1987) The structure of guanosine-thymidine mismatches in B-DNA at 2.5 Å resolution. J. Biol. Chem., 262, 9962-9970.
    • (1987) J. Biol. Chem , vol.262 , pp. 9962-9970
    • Hunter, W.N.1    Brown, T.2    Kneale, G.3    Anand, N.N.4    Rabinovich, D.5    Kennard, O.6
  • 12
    • 0023664782 scopus 로고
    • Structural features and hydration of a dodecamer duplex containing two CA mispairs
    • Hunter, W.N., Brown, T. and Kennard, O. (1987) Structural features and hydration of a dodecamer duplex containing two CA mispairs. Nucleic Acids Res., 15, 6589-6606.
    • (1987) Nucleic Acids Res , vol.15 , pp. 6589-6606
    • Hunter, W.N.1    Brown, T.2    Kennard, O.3
  • 13
    • 0000812659 scopus 로고
    • Base pairing and mutagenesis: Observation of a protonated base pair between 2-aminopurine and cytosine in an oligonucleotide by proton NMR
    • Sowers, L.C., Fazakerley, G.V., Eritja, R., Kaplan, B.E. and Goodman, M.F. (1986) Base pairing and mutagenesis: observation of a protonated base pair between 2-aminopurine and cytosine in an oligonucleotide by proton NMR. Proc. Natl Acad. Sci. USA, 83, 5434-5438.
    • (1986) Proc. Natl. Acad. Sci. USA , vol.83 , pp. 5434-5438
    • Sowers, L.C.1    Fazakerley, G.V.2    Eritja, R.3    Kaplan, B.E.4    Goodman, M.F.5
  • 15
    • 0023648333 scopus 로고
    • NMR studies on an oligodeoxynucleotide containing 2-aminopurine opposite adenine
    • Fazakerley, G.V., Sowers, L.C., Eritja, R., Kaplan, B.E. and Goodman, M.F. (1987) NMR studies on an oligodeoxynucleotide containing 2-aminopurine opposite adenine. Biochemistry, 26, 5641-5646.
    • (1987) Biochemistry , vol.26 , pp. 5641-5646
    • Fazakerley, G.V.1    Sowers, L.C.2    Eritja, R.3    Kaplan, B.E.4    Goodman, M.F.5
  • 16
    • 0021754242 scopus 로고
    • Deoxyadenosine pairing in the d(CGAGAATTCGCG) duplex-conformation and dynamics at and adjacent to the dG.dA mismatch site
    • Patel, D.J., Kozlowski, S.A., Ikuta, S. and Itakura, K. (1984) Deoxyadenosine pairing in the d(CGAGAATTCGCG) duplex-conformation and dynamics at and adjacent to the dG.dA mismatch site. Biochemistry, 23, 3207-3217.
    • (1984) Biochemistry , vol.23 , pp. 3207-3217
    • Patel, D.J.1    Kozlowski, S.A.2    Ikuta, S.3    Itakura, K.4
  • 17
    • 0030448134 scopus 로고    scopus 로고
    • Solution structure of two mismatches Gand Iin the K-ras gene context by nuclear magnetic resonance and molecular dynamics
    • Faibis, V., Cognet, J.A.H., Boulard, Y., Sowers, L.C. and Fazakerley, G.V. (1996) Solution structure of two mismatches Gand Iin the K-ras gene context by nuclear magnetic resonance and molecular dynamics. Biochemistry, 35, 14452-14464.
    • (1996) Biochemistry , vol.35 , pp. 14452-14464
    • Faibis, V.1    Cognet, J.A.H.2    Boulard, Y.3    Sowers, L.C.4    Fazakerley, G.V.5
  • 19
    • 0026338118 scopus 로고
    • Solution conformation of an oligonucleotide containing a G.G mismatch determined by nuclear magnetic resonance and molecular mechanics
    • Cognet, J.A.H., Gabarro-Arpa, J., LeBret, M., Van der Marel, G.A., Boom, J.H. and Fazakerley, G.V. (1991) Solution conformation of an oligonucleotide containing a G.G mismatch determined by nuclear magnetic resonance and molecular mechanics. Nucleic Acids Res., 19, 6771-6779.
    • (1991) Nucleic Acids Res , vol.19 , pp. 6771-6779
    • Cognet, J.A.H.1    Gabarro-Arpa, J.2    LeBret, M.3    Van der Marel, G.A.4    Boom, J.H.5    Fazakerley, G.V.6
  • 20
    • 0028933904 scopus 로고
    • Solution structure of two mismatches Aand Tin the K-ras gene context by nuclear magnetic resonance and molecular dynamics
    • Gervais, V., Cognet, J.A.H., LeBret, M., Sowers, L.C. and Fazakerley, G.V. (1995) Solution structure of two mismatches Aand Tin the K-ras gene context by nuclear magnetic resonance and molecular dynamics. Eur. J. Biochem., 228, 279-290.
    • (1995) Eur. J. Biochem , vol.228 , pp. 279-290
    • Gervais, V.1    Cognet, J.A.H.2    LeBret, M.3    Sowers, L.C.4    Fazakerley, G.V.5
  • 23
    • 0031547972 scopus 로고    scopus 로고
    • Solution structure as a function of pH of two central mismatches, C.T and C.C, in the 29 to 39 K-ras gene sequence, by nuclear magnetic resonance and molecular dynamics
    • Boulard, Y., Cognet, J.A.H. and Fazakerley, G.V. (1997) Solution structure as a function of pH of two central mismatches, C.T and C.C, in the 29 to 39 K-ras gene sequence, by nuclear magnetic resonance and molecular dynamics. J. Mol. Biol., 268, 331-347.
    • (1997) J. Mol. Biol , vol.268 , pp. 331-347
    • Boulard, Y.1    Cognet, J.A.H.2    Fazakerley, G.V.3
  • 24
    • 0033596964 scopus 로고    scopus 로고
    • Nearest-neighbor thermodynamics and NMR of DNA sequences with internal A.A, C.C, G.G, and T.T mismatches
    • Peyret, P., Seneviratne, A., Allawi, H.T. and SantaLucia, J.,Jr (1999) Nearest-neighbor thermodynamics and NMR of DNA sequences with internal A.A, C.C, G.G, and T.T mismatches. Biochemistry, 38, 3468-3477.
    • (1999) Biochemistry , vol.38 , pp. 3468-3477
    • Peyret, P.1    Seneviratne, A.2    Allawi, H.T.3    SantaLucia J., Jr.4
  • 26
    • 0001344298 scopus 로고
    • G(syn).A(anti) mismatch formation in DNA dodecamers at acidic pH; pH-dependent conformational transition of G.A mispairs detected by proton NMR
    • Gao, X. and Patel, D.J. (1988) G(syn).A(anti) mismatch formation in DNA dodecamers at acidic pH; pH-dependent conformational transition of G.A mispairs detected by proton NMR. J. Am. Chem. Soc., 110, 5178-5182.
    • (1988) J. Am. Chem. Soc , vol.110 , pp. 5178-5182
    • Gao, X.1    Patel, D.J.2
  • 27
    • 0026498013 scopus 로고
    • Solution structure of d(ATGAGCGAATA)2 - Adjacent G.A mismatches stabilized by crossstrand base-stacking and B(II) phosphate groups
    • Cheng, J.W., Chou, S.H. and Reid, B.R. (1992) Solution structure of d(ATGAGCGAATA)2 - adjacent G.A mismatches stabilized by crossstrand base-stacking and B(II) phosphate groups. J. Mol. Biol., 228, 138-155.
    • (1992) J. Mol. Biol , vol.228 , pp. 138-155
    • Cheng, J.W.1    Chou, S.H.2    Reid, B.R.3
  • 28
    • 0025786033 scopus 로고
    • Thermodynamics of DNA duplexes with adjacent G.A mismatches
    • Li, Y., Gerald, W. and David, W. (1991) Thermodynamics of DNA duplexes with adjacent G.A mismatches. Biochemistry, 30, 7566-7572.
    • (1991) Biochemistry , vol.30 , pp. 7566-7572
    • Li, Y.1    Gerald, W.2    David, W.3
  • 29
    • 0032212134 scopus 로고    scopus 로고
    • NMR solution structure of a DNA dodecamer containing single G.T mismatches
    • Allawi, H.T. and SantaLucia, J.,Jr (1998) NMR solution structure of a DNA dodecamer containing single G.T mismatches. Nucleic Acids Res., 26, 4925-4934.
    • (1998) Nucleic Acids Res , vol.26 , pp. 4925-4934
    • Allawi, H.T.1    SantaLucia J., Jr.2
  • 30
    • 0033772184 scopus 로고    scopus 로고
    • Mutation detection by electrocatalysis at DNA-modified electrodes
    • Boon, E.M., Ceres, D.M., Drummond, T.G., Hill, M.G. and Barton, J.K. (2000) Mutation detection by electrocatalysis at DNA-modified electrodes. Nat. Biotechnol., 18, 1096-1100.
    • (2000) Nat. Biotechnol , vol.18 , pp. 1096-1100
    • Boon, E.M.1    Ceres, D.M.2    Drummond, T.G.3    Hill, M.G.4    Barton, J.K.5
  • 31
    • 0034692364 scopus 로고    scopus 로고
    • Variations in DNA charge transport with nucleotide composition and sequence
    • Williams, T.T., Odom, D.T. and Barton, J.K. (2000) Variations in DNA charge transport with nucleotide composition and sequence. J. Am. Chem. Soc., 122, 9048-9049.
    • (2000) J. Am. Chem. Soc , vol.122 , pp. 9048-9049
    • Williams, T.T.1    Odom, D.T.2    Barton, J.K.3
  • 32
    • 0033572711 scopus 로고    scopus 로고
    • Single-base mismatch detection based on charge transduction through DNA
    • Kelley, S.O., Boon, E.M., Barton, J.K., Jackson, N.M. and Hill, M.G. (1999) Single-base mismatch detection based on charge transduction through DNA. Nucleic Acids Res., 27, 4830-4837.
    • (1999) Nucleic Acids Res , vol.27 , pp. 4830-4837
    • Kelley, S.O.1    Boon, E.M.2    Barton, J.K.3    Jackson, N.M.4    Hill, M.G.5
  • 33
    • 0035110550 scopus 로고    scopus 로고
    • Dynamics of photoinduced charge transfer and hole transport in synthetic DNA hairpins
    • Lewis, F.D., Letsinger R.L. and Wasielewski, M.R. (2001) Dynamics of photoinduced charge transfer and hole transport in synthetic DNA hairpins. Acc. Chem. Res., 34, 159-170.
    • (2001) Acc. Chem. Res , vol.34 , pp. 159-170
    • Lewis, F.D.1    Letsinger, R.L.2    Wasielewski, M.R.3
  • 36
    • 0033797431 scopus 로고    scopus 로고
    • Long distance charge transport in DNA: The hopping mechanism
    • Giese, B. (2000) Long distance charge transport in DNA: The hopping mechanism. Acc. Chem. Res., 33, 631-636.
    • (2000) Acc. Chem. Res , vol.33 , pp. 631-636
    • Giese, B.1
  • 37
    • 0034058321 scopus 로고    scopus 로고
    • Long-range charge transfer in DNA: Transient structural distortions control the distance dependence
    • Schuster, G.B. (2000) Long-range charge transfer in DNA: Transient structural distortions control the distance dependence. Acc. Chem. Res., 33, 253-260.
    • (2000) Acc. Chem. Res , vol.33 , pp. 253-260
    • Schuster, G.B.1
  • 38
    • 0035850541 scopus 로고    scopus 로고
    • The influence of intervening mismatches on long-range guanine oxidation in DNA duplexes
    • Bhattacharya, P.K. and Barton, J.K. (2001) The influence of intervening mismatches on long-range guanine oxidation in DNA duplexes. J. Am. Chem. Soc., 123, 8649-8656.
    • (2001) J. Am. Chem. Soc , vol.123 , pp. 8649-8656
    • Bhattacharya, P.K.1    Barton, J.K.2
  • 40
    • 0020855355 scopus 로고
    • Hydrogen exchange and structural dynamics of proteins and nucleic acids
    • Englander, S.W. and Kallenbach, N.R. (1983) Hydrogen exchange and structural dynamics of proteins and nucleic acids. Q. Rev. Biophys., 16, 521-655.
    • (1983) Q. Rev. Biophys , vol.16 , pp. 521-655
    • Englander, S.W.1    Kallenbach, N.R.2
  • 41
    • 0029120978 scopus 로고
    • Terminal base pairs of oligodeoxynucleotides: Imino proton exchange and fraying
    • Nonin, S., Leroy, J.L. and Gueron, M. (1995) Terminal base pairs of oligodeoxynucleotides: imino proton exchange and fraying. Biochemistry, 34, 10652-10659.
    • (1995) Biochemistry , vol.34 , pp. 10652-10659
    • Nonin, S.1    Leroy, J.L.2    Gueron, M.3
  • 42
    • 0001883517 scopus 로고
    • Base-pair opening in double-stranded nucleic acids
    • Eckstein, F. and Lilley, D.M.J. (eds), Springer-Verlag, Berlin, Heidelberg, Germany
    • Gueron, M. and Leroy, J.L. (1992) Base-pair opening in double-stranded nucleic acids. In Eckstein, F. and Lilley, D.M.J. (eds), Nucleic Acids and Molecular Biology. Springer-Verlag, Berlin, Heidelberg, Germany, Vol. 6, pp. 1-22.
    • (1992) Nucleic Acids and Molecular Biology , vol.6 , pp. 1-22
    • Gueron, M.1    Leroy, J.L.2
  • 43
    • 0024285807 scopus 로고
    • Evidence from base-pair kinetics for two types of adenine tract structures in solution-their relation to DNA curvature
    • Leroy, J.L., Charretier, E., Kochoyan, M. and Guéron, M. (1988) Evidence from base-pair kinetics for two types of adenine tract structures in solution-their relation to DNA curvature. Biochemistry, 27, 8894-8898.
    • (1988) Biochemistry , vol.27 , pp. 8894-8898
    • Leroy, J.L.1    Charretier, E.2    Kochoyan, M.3    Guéron, M.4
  • 44
    • 0033548682 scopus 로고    scopus 로고
    • High base pair opening rates in tracts of GC base pairs
    • Dornberger, U., Leijon, M. and Fritzsche, H. (1999) High base pair opening rates in tracts of GC base pairs. J. Biol. Chem., 274, 6957-6962.
    • (1999) J. Biol. Chem , vol.274 , pp. 6957-6962
    • Dornberger, U.1    Leijon, M.2    Fritzsche, H.3
  • 45
    • 0031583481 scopus 로고    scopus 로고
    • Unique base-pair breathing dynamics in PNA-DNA hybrids
    • Leijon, M., Sehlstedt, U., Nielsen, P.E. and Gräslund, A. (1997) Unique base-pair breathing dynamics in PNA-DNA hybrids. J. Mol. Biol. 271, 438-455.
    • (1997) J. Mol. Biol , vol.271 , pp. 438-455
    • Leijon, M.1    Sehlstedt, U.2    Nielsen, P.E.3    Gräslund, A.4
  • 46
    • 0025743423 scopus 로고
    • Proton-exchange and internal motions in two chromomycin dimer DNA oligomer complexes
    • Leroy, J.L., Gao, X.L., Guéron, M. and Patel, D.J. (1991) Proton-exchange and internal motions in two chromomycin dimer DNA oligomer complexes. Biochemistry, 30, 5653-5661.
    • (1991) Biochemistry , vol.30 , pp. 5653-5661
    • Leroy, J.L.1    Gao, X.L.2    Guéron, M.3    Patel, D.J.4
  • 48
    • 0026951903 scopus 로고
    • Gradient-tailored excitation for single-quantum NMR spectroscopy of aqueous solutions
    • Piotto, M., Saudek, V. and Sklenar, V.J. (1992) Gradient-tailored excitation for single-quantum NMR spectroscopy of aqueous solutions. J. Biomol. NMR, 2, 661-665.
    • (1992) J. Biomol. NMR , vol.2 , pp. 661-665
    • Piotto, M.1    Saudek, V.2    Sklenar, V.J.3
  • 49
    • 0027323634 scopus 로고
    • Direct estimation of base-pair exchange kinetics in oligo-DNA by a combination of NOESY and ROESY experiments
    • Maltseva, T.V., Yamakage, S.I. and Chattopadhyaya, J. (1993) Direct estimation of base-pair exchange kinetics in oligo-DNA by a combination of NOESY and ROESY experiments. Nucleic Acids Res., 18, 4288-4295.
    • (1993) Nucleic Acids Res , vol.18 , pp. 4288-4295
    • Maltseva, T.V.1    Yamakage, S.I.2    Chattopadhyaya, J.3
  • 50
    • 0001263889 scopus 로고
    • Cross relaxation without TOCSY-transverse rotating frame overhauser effect spectroscopy
    • Hwang, T.L. and Shaka, A.J. (1992) Cross relaxation without TOCSY-transverse rotating frame overhauser effect spectroscopy. J. Am. Chem. Soc., 114, 3157-3159.
    • (1992) J. Am. Chem. Soc , vol.114 , pp. 3157-3159
    • Hwang, T.L.1    Shaka, A.J.2
  • 51
    • 0013994339 scopus 로고
    • Hydrogen exchange in proteins
    • Hvidt, A. and Nielsen, S.O. (1966) Hydrogen exchange in proteins. Adv. Protein Chem., 21, 287-386.
    • (1966) Adv. Protein Chem , vol.21 , pp. 287-386
    • Hvidt, A.1    Nielsen, S.O.2
  • 52
    • 0026737976 scopus 로고
    • Kinetics and energetics of base-pair opening in 5′-d(CGCGAATTCGCG)-3′ and a substituted dodecamer containing G.T mismatches
    • Moe, J.G. and Russu, I.M. (1992) Kinetics and energetics of base-pair opening in 5′-d(CGCGAATTCGCG)-3′ and a substituted dodecamer containing G.T mismatches. Biochemistry, 31, 8421-8428.
    • (1992) Biochemistry , vol.31 , pp. 8421-8428
    • Moe, J.G.1    Russu, I.M.2
  • 53
    • 0020477029 scopus 로고
    • Kinetics for exchange of imino protons in the d(CGCGAATTCGCG) double helix and in two similar helices that contain a G-T base pair, d(CGTGAATTCGCG), and an extra adenine, d(CGCAGAATTCGCG)
    • Pardi, A., Morden, K.M. and Patel, D.J. (1982) Kinetics for exchange of imino protons in the d(CGCGAATTCGCG) double helix and in two similar helices that contain a G-T base pair, d(CGTGAATTCGCG), and an extra adenine, d(CGCAGAATTCGCG). Biochemistry, 21, 6567-6574.
    • (1982) Biochemistry , vol.21 , pp. 6567-6574
    • Pardi, A.1    Morden, K.M.2    Patel, D.J.3
  • 54
    • 0001824401 scopus 로고    scopus 로고
    • Structure, motion, interaction and expression of biological macromolecules
    • Sarma, R.H. and Sarma, M.H. (eds), Adenine Press, Schenectady, NY
    • Dickerson, R.E. (1998) Structure, motion, interaction and expression of biological macromolecules. In Sarma, R.H. and Sarma, M.H. (eds), Proceedings of Tenth Conversations in Biomolecular Stereodynamics. Adenine Press, Schenectady, NY, pp. 17-36.
    • (1998) Proceedings of Tenth Conversations in Biomolecular Stereodynamics , pp. 17-36
    • Dickerson, R.E.1
  • 55
    • 0028864424 scopus 로고
    • Studies of base pair kinetics by NMR measurement of proton exchange
    • Gueron, M. and Leroy, J.L. (1995) Studies of base pair kinetics by NMR measurement of proton exchange. Methods Enzymol., 261, 383-413.
    • (1995) Methods Enzymol , vol.261 , pp. 383-413
    • Gueron, M.1    Leroy, J.L.2
  • 56
    • 0031149127 scopus 로고    scopus 로고
    • Long-range oxidation of guanine by Ru(III) in duplex DNA
    • Arkin, M.R., Stemp, E.D., Pulver, S.C. and Barton, J.K. (1997) Long-range oxidation of guanine by Ru(III) in duplex DNA. Chem. Biol., 4, 389-400.
    • (1997) Chem. Biol , vol.4 , pp. 389-400
    • Arkin, M.R.1    Stemp, E.D.2    Pulver, S.C.3    Barton, J.K.4
  • 57
    • 0013411169 scopus 로고
    • Molecular mechanical studies of DNA flexibility coupled backbone torsion angles and base-pair openings
    • Keepers, J., Kollman, P.A., Weiner, P.K. and James, T.L. (1982) Molecular mechanical studies of DNA flexibility coupled backbone torsion angles and base-pair openings. Proc. Natl Acad. Sci. USA, 79, 5537-5541.
    • (1982) Proc. Natl. Acad. Sci. USA , vol.79 , pp. 5537-5541
    • Keepers, J.1    Kollman, P.A.2    Weiner, P.K.3    James, T.L.4
  • 58
    • 0021530010 scopus 로고
    • Molecular mechanical studies of base-pair opening in d(CGCGC)-d(GCGCG), dG5.dC5, d(TATAT)-d(ATATA), and dA5.dT5 in the B-form and Z-form of DNA
    • Keepers, J., Kollman, P.A. and James, T.L. (1984) Molecular mechanical studies of base-pair opening in d(CGCGC)-d(GCGCG), dG5.dC5, d(TATAT)-d(ATATA), and dA5.dT5 in the B-form and Z-form of DNA. Biopolymers, 23, 2499-2511.
    • (1984) Biopolymers , vol.23 , pp. 2499-2511
    • Keepers, J.1    Kollman, P.A.2    James, T.L.3
  • 59
    • 0000777707 scopus 로고
    • Energetic coupling between DNA bending and base pair opening
    • Ramstein, J. and Lavery, R. (1988) Energetic coupling between DNA bending and base pair opening. Proc. Natl Acad. Sci. USA, 85, 7231-7235.
    • (1988) Proc. Natl. Acad. Sci. USA , vol.85 , pp. 7231-7235
    • Ramstein, J.1    Lavery, R.2
  • 60
    • 0025250179 scopus 로고
    • Base pair opening pathways in B-DNA
    • Ramstein, J. and Lavery, R. (1990) Base pair opening pathways in B-DNA. J. Biomol. Struct. Dyn., 7, 915-933.
    • (1990) J. Biomol. Struct. Dyn , vol.7 , pp. 915-933
    • Ramstein, J.1    Lavery, R.2
  • 61
    • 0028928438 scopus 로고
    • Helical parameters, fluctuations, alternative hydrogen-bonding, and bending in oligonucleotides containing a mismatched base pair by NOESY distance restrained and distance free molecular dynamics
    • Cognet, J.A., Boulard, Y. and Fazakerley, G.V. (1995) Helical parameters, fluctuations, alternative hydrogen-bonding, and bending in oligonucleotides containing a mismatched base pair by NOESY distance restrained and distance free molecular dynamics. J. Mol. Biol., 246, 209-226.
    • (1995) J. Mol. Biol , vol.246 , pp. 209-226
    • Cognet, J.A.1    Boulard, Y.2    Fazakerley, G.V.3


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