-
1
-
-
0029791943
-
Distinct activated and non-activated RNA polymerase II complexes in yeast
-
Akhtar A., Faye G., Bentley D.L. Distinct activated and non-activated RNA polymerase II complexes in yeast. EMBO J. 15:1996;4654-4664.
-
(1996)
EMBO J.
, vol.15
, pp. 4654-4664
-
-
Akhtar, A.1
Faye, G.2
Bentley, D.L.3
-
2
-
-
0038832859
-
Conserved structures of mediator and RNA polymerase II holoenzyme
-
Asturias F.J., Jiang Y.W., Myers L.C., Gustafsson C.M., Kornberg R.D. Conserved structures of mediator and RNA polymerase II holoenzyme. Science. 283:1999;985-987.
-
(1999)
Science
, vol.283
, pp. 985-987
-
-
Asturias, F.J.1
Jiang, Y.W.2
Myers, L.C.3
Gustafsson, C.M.4
Kornberg, R.D.5
-
3
-
-
0035907366
-
Structure-function analysis of the active site tunnel of yeast RNA triphosphatase
-
Bisaillon M., Shuman S. Structure-function analysis of the active site tunnel of yeast RNA triphosphatase. J. Biol. Chem. 276:2001;17261-17266.
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 17261-17266
-
-
Bisaillon, M.1
Shuman, S.2
-
4
-
-
0031453408
-
MRNA capping enzyme is recruited to the transcription complex by phosphorylation of the RNA polymerase II carboxy-terminal domain
-
Cho E.J., Takagi T., Moore C.R., Buratowski S. mRNA capping enzyme is recruited to the transcription complex by phosphorylation of the RNA polymerase II carboxy-terminal domain. Genes Dev. 11:1997;3319-3326.
-
(1997)
Genes Dev.
, vol.11
, pp. 3319-3326
-
-
Cho, E.J.1
Takagi, T.2
Moore, C.R.3
Buratowski, S.4
-
5
-
-
0032533898
-
Allosteric interactions between capping enzyme subunits and the RNA polymerase II carboxy-terminal domain
-
Cho E.-J., Rodriguez C.R., Takagi T., Buratowski S. Allosteric interactions between capping enzyme subunits and the RNA polymerase II carboxy-terminal domain. Genes Dev. 12:1998;3482-3487.
-
(1998)
Genes Dev.
, vol.12
, pp. 3482-3487
-
-
Cho, E.-J.1
Rodriguez, C.R.2
Takagi, T.3
Buratowski, S.4
-
6
-
-
0029990537
-
Distinct effects of ATP on transcription complex formation and initiation in a yeast in vitro transcription system
-
Coda-Zabetta F., Boam D.S.W. Distinct effects of ATP on transcription complex formation and initiation in a yeast in vitro transcription system. Biochim. Biophys. Acta. 1306:1996;194-202.
-
(1996)
Biochim. Biophys. Acta
, vol.1306
, pp. 194-202
-
-
Coda-Zabetta, F.1
Boam, D.S.W.2
-
7
-
-
0031784433
-
Micro-tip reversed-phase liquid chromatographic extraction of peptide pools for mass spectrometric analysis
-
Erdjument-Bromage H., Lui M., Lacomis L., Grewal A., Annan R.S., MacNulty D.E., Carr S.A., Tempst P. Micro-tip reversed-phase liquid chromatographic extraction of peptide pools for mass spectrometric analysis. J. Chromatogr. 826:1998;167-181.
-
(1998)
J. Chromatogr.
, vol.826
, pp. 167-181
-
-
Erdjument-Bromage, H.1
Lui, M.2
Lacomis, L.3
Grewal, A.4
Annan, R.S.5
MacNulty, D.E.6
Carr, S.A.7
Tempst, P.8
-
8
-
-
0025316464
-
Resolution of factors required for the initiation of transcription by yeast RNA polymerase II
-
Flanagan P.M., Kelleher R.J. III, Feaver W.J., Lue N.F., LaPointe J.W., Kornberg R.D. Resolution of factors required for the initiation of transcription by yeast RNA polymerase II. J. Biol. Chem. 265:1990;11105-11107.
-
(1990)
J. Biol. Chem.
, vol.265
, pp. 11105-11107
-
-
Flanagan, P.M.1
Kelleher R.J. III2
Feaver, W.J.3
Lue, N.F.4
LaPointe, J.W.5
Kornberg, R.D.6
-
9
-
-
0035924345
-
Stimulatory effect of splicing factors on transcriptional elongation
-
Fong Y.W., Zhou Q. Stimulatory effect of splicing factors on transcriptional elongation. Nature. 414:2001;929-933.
-
(2001)
Nature
, vol.414
, pp. 929-933
-
-
Fong, Y.W.1
Zhou, Q.2
-
10
-
-
0028214041
-
Active site of the mRNA-capping enzyme guanylyltransferase from Saccharomyces cerevisiae: Similarity to the nucleotidyl attachment motif of DNA and RNA ligases
-
Fresco L.D., Buratowski S. Active site of the mRNA-capping enzyme guanylyltransferase from Saccharomyces cerevisiae. similarity to the nucleotidyl attachment motif of DNA and RNA ligases Proc. Natl. Acad. Sci. USA. 91:1994;6624-6628.
-
(1994)
Proc. Natl. Acad. Sci. USA
, vol.91
, pp. 6624-6628
-
-
Fresco, L.D.1
Buratowski, S.2
-
11
-
-
0034652201
-
Tuning of an electrospray ionization source for maximum peptide-ion transmission into a mass spectrometer
-
Geromanos S., Freckleton G., Tempst P. Tuning of an electrospray ionization source for maximum peptide-ion transmission into a mass spectrometer. Anal. Chem. 72:2000;777-790.
-
(2000)
Anal. Chem.
, vol.72
, pp. 777-790
-
-
Geromanos, S.1
Freckleton, G.2
Tempst, P.3
-
12
-
-
0031840672
-
Molecular genetics of the RNA polymerase II general transcriptional machinery
-
Hampsey M. Molecular genetics of the RNA polymerase II general transcriptional machinery. Microbiol. Mol. Biol. Rev. 62:1998;465-503.
-
(1998)
Microbiol. Mol. Biol. Rev.
, vol.62
, pp. 465-503
-
-
Hampsey, M.1
-
13
-
-
0023262505
-
Functional steps in transcription initiation and reinitiation from the major late promoter in a HeLa nuclear extract
-
Hawley D.K., Roeder R.G. Functional steps in transcription initiation and reinitiation from the major late promoter in a HeLa nuclear extract. J. Biol. Chem. 262:1987;3452-3461.
-
(1987)
J. Biol. Chem.
, vol.262
, pp. 3452-3461
-
-
Hawley, D.K.1
Roeder, R.G.2
-
14
-
-
0033067906
-
Nuclear run-on assays: Assessing transcription by measuring density of engaged RNA polymerases
-
Hirayoshi K., Lis J.T. Nuclear run-on assays. assessing transcription by measuring density of engaged RNA polymerases Methods Enzymol. 304:1999;351-362.
-
(1999)
Methods Enzymol.
, vol.304
, pp. 351-362
-
-
Hirayoshi, K.1
Lis, J.T.2
-
15
-
-
0034659241
-
RNA polymerase II and the integration of nuclear events
-
Hirose Y., Manley J.L. RNA polymerase II and the integration of nuclear events. Genes Dev. 14:2000;1415-1429.
-
(2000)
Genes Dev.
, vol.14
, pp. 1415-1429
-
-
Hirose, Y.1
Manley, J.L.2
-
16
-
-
0033105827
-
Distinct roles for CTD Ser-2 and Ser-5 phosphorylation in the recruitment and allosteric activation of mammalian mRNA capping enzyme
-
Ho C.K., Shuman S. Distinct roles for CTD Ser-2 and Ser-5 phosphorylation in the recruitment and allosteric activation of mammalian mRNA capping enzyme. Mol. Cell. 3:1999;405-411.
-
(1999)
Mol. Cell
, vol.3
, pp. 405-411
-
-
Ho, C.K.1
Shuman, S.2
-
17
-
-
3543026832
-
Genetic, physical, and functional interactions between the triphosphatase and guanylyltransferase components of the yeast mRNA capping apparatus
-
Ho C.K., Schwer B., Shuman S. Genetic, physical, and functional interactions between the triphosphatase and guanylyltransferase components of the yeast mRNA capping apparatus. Mol. Cell. Biol. 18:1998;5189-5198. a.
-
(1998)
Mol. Cell. Biol.
, vol.18
, pp. 5189-5198
-
-
Ho, C.K.1
Schwer, B.2
Shuman, S.3
-
18
-
-
0032545284
-
Yeast and Viral RNA 5′ triphosphatases comprise a new nucleoside triphosphatase family
-
Ho C.K., Pei Y., Shuman S. Yeast and Viral RNA 5′ triphosphatases comprise a new nucleoside triphosphatase family. J. Biol. Chem. 273:1998;34151-34156. b.
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 34151-34156
-
-
Ho, C.K.1
Pei, Y.2
Shuman, S.3
-
19
-
-
0023654017
-
Messenger RNA guanylyltransferase from Saccharomyces cerevisiae
-
Itoh N., Yamada H., Kaziro Y., Mizumoto K. Messenger RNA guanylyltransferase from Saccharomyces cerevisiae. J. Biol. Chem. 262:1987;1989-1995.
-
(1987)
J. Biol. Chem.
, vol.262
, pp. 1989-1995
-
-
Itoh, N.1
Yamada, H.2
Kaziro, Y.3
Mizumoto, K.4
-
20
-
-
0036645687
-
The yeast THO complex and mRNA export factors link RNA metabolism with transcription and genome instability
-
Jimeno S., Rondón A.G., Luna R., Aguilera A. The yeast THO complex and mRNA export factors link RNA metabolism with transcription and genome instability. EMBO J. 21:2002;3526-3535.
-
(2002)
EMBO J.
, vol.21
, pp. 3526-3535
-
-
Jimeno, S.1
Rondón, A.G.2
Luna, R.3
Aguilera, A.4
-
21
-
-
0005138411
-
Transcription initiation by RNA polymerase II is inhibited by S-adenosylhomocysteine
-
Jove R., Manley J. Transcription initiation by RNA polymerase II is inhibited by S-adenosylhomocysteine. Proc. Natl. Acad. Sci. USA. 79:1982;5842-5846.
-
(1982)
Proc. Natl. Acad. Sci. USA
, vol.79
, pp. 5842-5846
-
-
Jove, R.1
Manley, J.2
-
22
-
-
0034307008
-
Different phosphorylated forms of RNA polymerase II and associated mRNA processing factors during transcription
-
Komarnitsky P., Cho E.-J., Buratowski S. Different phosphorylated forms of RNA polymerase II and associated mRNA processing factors during transcription. Genes Dev. 14:2000;2452-2460.
-
(2000)
Genes Dev.
, vol.14
, pp. 2452-2460
-
-
Komarnitsky, P.1
Cho, E.-J.2
Buratowski, S.3
-
23
-
-
0032451112
-
Mechanism and regulation of yeast RNA polymerase II transcription
-
Kornberg R.D. Mechanism and regulation of yeast RNA polymerase II transcription. Cold Spring Harb. Symp. Quant. Biol. 63:1998;229-232.
-
(1998)
Cold Spring Harb. Symp. Quant. Biol.
, vol.63
, pp. 229-232
-
-
Kornberg, R.D.1
-
24
-
-
0032523882
-
Regulation of gene expression by TBP-associated proteins
-
Lee T.I., Young R.A. Regulation of gene expression by TBP-associated proteins. Genes Dev. 12:1998;1398-1408.
-
(1998)
Genes Dev.
, vol.12
, pp. 1398-1408
-
-
Lee, T.I.1
Young, R.A.2
-
25
-
-
0034507632
-
Transcription of eukaryotic protein-coding genes
-
Lee T.I., Young R.A. Transcription of eukaryotic protein-coding genes. Annu. Rev. Genet. 34:2000;77-137.
-
(2000)
Annu. Rev. Genet.
, vol.34
, pp. 77-137
-
-
Lee, T.I.1
Young, R.A.2
-
26
-
-
0032727344
-
Different upstream transcriptional activators have distinct coactivator requirements
-
Lee D., Kim S., Lis J.T. Different upstream transcriptional activators have distinct coactivator requirements. Genes Dev. 13:1999;2934-2939.
-
(1999)
Genes Dev.
, vol.13
, pp. 2934-2939
-
-
Lee, D.1
Kim, S.2
Lis, J.T.3
-
27
-
-
0033529501
-
A conserved domain of yeast RNA triphosphatase flanking the catalytic core regulates self-association and interaction with the guanylyltransferase component of the mRNA capping apparatus
-
Lehman K., Schwer B., Ho C.K., Rouzankina I., Shuman S. A conserved domain of yeast RNA triphosphatase flanking the catalytic core regulates self-association and interaction with the guanylyltransferase component of the mRNA capping apparatus. J. Biol. Chem. 274:1999;22668-22678.
-
(1999)
J. Biol. Chem.
, vol.274
, pp. 22668-22678
-
-
Lehman, K.1
Schwer, B.2
Ho, C.K.3
Rouzankina, I.4
Shuman, S.5
-
28
-
-
0037041395
-
An extensive network of coupling among gene expression machines
-
Maniatis T., Reed R. An extensive network of coupling among gene expression machines. Nature. 416:2002;499-506.
-
(2002)
Nature
, vol.416
, pp. 499-506
-
-
Maniatis, T.1
Reed, R.2
-
29
-
-
0027608882
-
Use of mass spectrometric molecular weight information to identify proteins in databases
-
Mann M., Højrup P., Roepstorff P. Use of mass spectrometric molecular weight information to identify proteins in databases. Biol. Mass Spectrom. 22:1993;338-345.
-
(1993)
Biol. Mass Spectrom.
, vol.22
, pp. 338-345
-
-
Mann, M.1
Højrup, P.2
Roepstorff, P.3
-
30
-
-
15644372864
-
5′-capping enzymes are targeted to pre-mRNA by binding to the phosphorylated carboxy-terminal domain of RNA polymerase II
-
McCracken S., Fong N., Rosonina E., Yankulov K., Brothers G., Siderovski D., Hessel A., Foster S., Shuman S., Bentley D.L. 5′-capping enzymes are targeted to pre-mRNA by binding to the phosphorylated carboxy-terminal domain of RNA polymerase II. Genes Dev. 11:1997;3306-3318.
-
(1997)
Genes Dev.
, vol.11
, pp. 3306-3318
-
-
McCracken, S.1
Fong, N.2
Rosonina, E.3
Yankulov, K.4
Brothers, G.5
Siderovski, D.6
Hessel, A.7
Foster, S.8
Shuman, S.9
Bentley, D.L.10
-
31
-
-
0033786937
-
Mediator of transcriptional regulation
-
Myers L.C., Kornberg R.D. Mediator of transcriptional regulation. Annu. Rev. Biochem. 69:2000;729-749.
-
(2000)
Annu. Rev. Biochem.
, vol.69
, pp. 729-749
-
-
Myers, L.C.1
Kornberg, R.D.2
-
32
-
-
0031194868
-
Yeast RNA polymerase II transcription with purified proteins
-
Myers L.C., Leuther K., Bushnell D.A., Gustafsson C.M., Kornberg R.D. Yeast RNA polymerase II transcription with purified proteins. Methods. 12:1997;212-216.
-
(1997)
Methods
, vol.12
, pp. 212-216
-
-
Myers, L.C.1
Leuther, K.2
Bushnell, D.A.3
Gustafsson, C.M.4
Kornberg, R.D.5
-
33
-
-
0031881688
-
The Med proteins of yeast and their function through the RNA polymerase II C-terminal domain
-
Myers L.C., Gustafsson C.M., Bushnell D.A., Lui M., Erdjument-Bromage H., Tempst P., Kornberg R.D. The Med proteins of yeast and their function through the RNA polymerase II C-terminal domain. Genes Dev. 12:1998;45-54.
-
(1998)
Genes Dev.
, vol.12
, pp. 45-54
-
-
Myers, L.C.1
Gustafsson, C.M.2
Bushnell, D.A.3
Lui, M.4
Erdjument-Bromage, H.5
Tempst, P.6
Kornberg, R.D.7
-
34
-
-
0029846871
-
The general transcription factors of RNA polymerase II
-
Orphanides G., Lagrange T., Reinberg D. The general transcription factors of RNA polymerase II. Genes Dev. 10:1996;2657-2683.
-
(1996)
Genes Dev.
, vol.10
, pp. 2657-2683
-
-
Orphanides, G.1
Lagrange, T.2
Reinberg, D.3
-
35
-
-
0036241663
-
Exchange of RNA polymerase II initiation and elongation factors during gene expression in vivo
-
Pokholok D.K., Hannett N.M., Young R.A. Exchange of RNA polymerase II initiation and elongation factors during gene expression in vivo. Mol. Cell. 4:2002;799-809.
-
(2002)
Mol. Cell
, vol.4
, pp. 799-809
-
-
Pokholok, D.K.1
Hannett, N.M.2
Young, R.A.3
-
36
-
-
0026002408
-
The yeast general transcription factor TFIIA is composed of two polypeptide subunits
-
Ranish J.A., Hahn S. The yeast general transcription factor TFIIA is composed of two polypeptide subunits. J. Biol. Chem. 266:1991;19320-19327.
-
(1991)
J. Biol. Chem.
, vol.266
, pp. 19320-19327
-
-
Ranish, J.A.1
Hahn, S.2
-
37
-
-
0034307172
-
Dynamic association of capping enzymes with transcribing RNA polymerase II
-
Schroeder S.C., Schwer B., Shuman S., Bentley D. Dynamic association of capping enzymes with transcribing RNA polymerase II. Genes Dev. 14:2000;2435-2440.
-
(2000)
Genes Dev.
, vol.14
, pp. 2435-2440
-
-
Schroeder, S.C.1
Schwer, B.2
Shuman, S.3
Bentley, D.4
-
38
-
-
0032077454
-
Accelerated mRNA decay in conditional mutants of yeast mRNA capping enzyme
-
Schwer B., Mao X., Shuman S. Accelerated mRNA decay in conditional mutants of yeast mRNA capping enzyme. Nucleic Acids Res. 26:1998;2050-2057.
-
(1998)
Nucleic Acids Res.
, vol.26
, pp. 2050-2057
-
-
Schwer, B.1
Mao, X.2
Shuman, S.3
-
39
-
-
0035201941
-
Structure, mechanism, and evolution of the mRNA capping apparatus
-
Shuman S. Structure, mechanism, and evolution of the mRNA capping apparatus. Prog. Nucleic Acids Res. Mol. Biol. 66:2001;1-40.
-
(2001)
Prog. Nucleic Acids Res. Mol. Biol.
, vol.66
, pp. 1-40
-
-
Shuman, S.1
-
40
-
-
0036363646
-
Mechanisms of transcription-coupled DNA repair
-
Svejstrup J.Q. Mechanisms of transcription-coupled DNA repair. Nat. Rev. Mol. Cell Biol. 3:2002;21-29.
-
(2002)
Nat. Rev. Mol. Cell Biol.
, vol.3
, pp. 21-29
-
-
Svejstrup, J.Q.1
-
41
-
-
0034458956
-
The essential interaction between yeast mRNA capping enzyme subunits is not required for triphosphatase function in vivo
-
Takase Y., Takagi T., Komarnitsky P.B., Buratowski S. The essential interaction between yeast mRNA capping enzyme subunits is not required for triphosphatase function in vivo. Mol. Cell. Biol. 20:2000;9307-9316.
-
(2000)
Mol. Cell. Biol.
, vol.20
, pp. 9307-9316
-
-
Takase, Y.1
Takagi, T.2
Komarnitsky, P.B.3
Buratowski, S.4
-
42
-
-
0027645094
-
Resolution of transcription factors from a transcriptionally active whole-cell extract from yeast: Purification of TFIIB, TBP, and RNA polymerase IIa
-
Wade P.A., Shaffer S.D., Jaehning J.A. Resolution of transcription factors from a transcriptionally active whole-cell extract from yeast. purification of TFIIB, TBP, and RNA polymerase IIa Protein Expr. Purif. 4:1993;290-297.
-
(1993)
Protein Expr. Purif.
, vol.4
, pp. 290-297
-
-
Wade, P.A.1
Shaffer, S.D.2
Jaehning, J.A.3
-
43
-
-
0033566042
-
Transcription elongation factor hSPT5 stimulates mRNA capping
-
Wen Y., Shatkin A.J. Transcription elongation factor hSPT5 stimulates mRNA capping. Genes Dev. 13:1999;1774-1779.
-
(1999)
Genes Dev.
, vol.13
, pp. 1774-1779
-
-
Wen, Y.1
Shatkin, A.J.2
-
44
-
-
0030917142
-
Transcription reinitiation rate: A special role for the TATA box
-
Yean D., Gralla J. Transcription reinitiation rate. a special role for the TATA box Mol. Cell. Biol. 17:1997;3809-3816.
-
(1997)
Mol. Cell. Biol.
, vol.17
, pp. 3809-3816
-
-
Yean, D.1
Gralla, J.2
-
45
-
-
0034626731
-
A transcription reinitiation intermediate that is stabilized by activator
-
Yudkovsky N., Ranish J.A., Hahn S. A transcription reinitiation intermediate that is stabilized by activator. Nature. 408:2000;225-229.
-
(2000)
Nature
, vol.408
, pp. 225-229
-
-
Yudkovsky, N.1
Ranish, J.A.2
Hahn, S.3
|