메뉴 건너뛰기




Volumn 76, Issue 4, 2002, Pages 417-422

1H-NMR studies of duplex DNA decamer containing a uracil cyclobutane dimer: Implications regarding the high UV mutagenecity of CC photolesions

Author keywords

[No Author keywords available]

Indexed keywords

CYCLOBUTANE DERIVATIVE; CYTOSINE DERIVATIVE; DIMER; DOUBLE STRANDED DNA; PROTON; THYMINE; URACIL; DNA; PYRIMIDINE DIMER;

EID: 0036781775     PISSN: 00318655     EISSN: None     Source Type: Journal    
DOI: 10.1562/0031-8655(2002)076<0417:HNSODD>2.0.CO;2     Document Type: Article
Times cited : (1)

References (31)
  • 1
    • 0035957120 scopus 로고    scopus 로고
    • Individual determination of the yield of the main UV-induced dimeric pyrimidine photoproducts in DNA suggests a high mutagenicity of CC photolesions
    • Douki, T. and J. Cadet (2001) Individual determination of the yield of the main UV-induced dimeric pyrimidine photoproducts in DNA suggests a high mutagenicity of CC photolesions. Biochemistry 40, 2495-2501.
    • (2001) Biochemistry , vol.40 , pp. 2495-2501
    • Douki, T.1    Cadet, J.2
  • 2
    • 0027519326 scopus 로고
    • UV-induced G:C→A:T transitions at the APRT locus of Chinese hamster ovary cells cluster at frequently damaged 5′-TCC-3′ sequence
    • Drobetsky, E. A. and E. Sage (1993) UV-induced G:C→A:T transitions at the APRT locus of Chinese hamster ovary cells cluster at frequently damaged 5′-TCC-3′ sequence. Mutat. Res. 289, 131-138.
    • (1993) Mutat. Res. , vol.289 , pp. 131-138
    • Drobetsky, E.A.1    Sage, E.2
  • 3
    • 0022337378 scopus 로고
    • Mutagenic specificity of ultraviolet light
    • Miller, J. H. (1985) Mutagenic specificity of ultraviolet light. J. Mol. Biol. 182, 45-65.
    • (1985) J. Mol. Biol. , vol.182 , pp. 45-65
    • Miller, J.H.1
  • 4
    • 0035866762 scopus 로고    scopus 로고
    • Tandem and C to T transitions located at the bipyrimidine sites known to be hotspots of UV-induced DNA lesions
    • Spatz, A., G. Giglia-Mari, S. Benhamou and A. Sarasin (2001) Tandem and C to T transitions located at the bipyrimidine sites known to be hotspots of UV-induced DNA lesions. Cancer Res. 61, 2480-2486.
    • (2001) Cancer Res. , vol.61 , pp. 2480-2486
    • Spatz, A.1    Giglia-Mari, G.2    Benhamou, S.3    Sarasin, A.4
  • 5
    • 0034747804 scopus 로고    scopus 로고
    • Requirement of DNA polymerase eta for error-free bypass of UV-induced CC and TC photoproducts
    • Yu, S. L., R. E. Johnson, S. Prakash and L. Prakash (2001) Requirement of DNA polymerase eta for error-free bypass of UV-induced CC and TC photoproducts. Mol. Cell. Biol. 21, 185-188.
    • (2001) Mol. Cell. Biol. , vol.21 , pp. 185-188
    • Yu, S.L.1    Johnson, R.E.2    Prakash, S.3    Prakash, L.4
  • 6
    • 0027212216 scopus 로고
    • Kinetics of bisulfite-induced cytosine deamination in single-stranded DNA
    • Chen, H. and B. R. Shaw (1993) Kinetics of bisulfite-induced cytosine deamination in single-stranded DNA. Biochemistry 32, 3535-3539.
    • (1993) Biochemistry , vol.32 , pp. 3535-3539
    • Chen, H.1    Shaw, B.R.2
  • 7
    • 0027469125 scopus 로고
    • In vivo evidence that UV-induced C→T mutations at dipyrimidine sites could result from the replicative bypass of cis-syn cyctobutane dimers or their deamination products
    • Jiang, N. and J.-S. Taylor (1993) In vivo evidence that UV-induced C→T mutations at dipyrimidine sites could result from the replicative bypass of cis-syn cyctobutane dimers or their deamination products. Biochemistry 32, 472-481.
    • (1993) Biochemistry , vol.32 , pp. 472-481
    • Jiang, N.1    Taylor, J.-S.2
  • 8
    • 0028097633 scopus 로고
    • Accuracy of replication past the T-C (6-4) adduct
    • Horsfall, M. J. and C. W. Lawrence (1994) Accuracy of replication past the T-C (6-4) adduct. J. Mol. Biol. 235, 465-471.
    • (1994) J. Mol. Biol. , vol.235 , pp. 465-471
    • Horsfall, M.J.1    Lawrence, C.W.2
  • 9
    • 0027281808 scopus 로고
    • U-U and T-T cyclobutane dimers have different mutational properties
    • Gibbs, P. E. and C. W. Lawrence (1993) U-U and T-T cyclobutane dimers have different mutational properties. Nucleic Acids Res. 21, 4059-4065.
    • (1993) Nucleic Acids Res. , vol.21 , pp. 4059-4065
    • Gibbs, P.E.1    Lawrence, C.W.2
  • 10
    • 0031267083 scopus 로고    scopus 로고
    • UVB-induced cyclobutane pyrimidine dimer frequency correlates with skin cancer mutational hotspots in p53
    • Drouin, R. and J. P. Therrien (1997) UVB-induced cyclobutane pyrimidine dimer frequency correlates with skin cancer mutational hotspots in p53. Photchem. Photobiol. 66, 719-726.
    • (1997) Photchem. Photobiol. , vol.66 , pp. 719-726
    • Drouin, R.1    Therrien, J.P.2
  • 11
    • 0027379357 scopus 로고
    • Specific UV-induced mutation spectrum in the p53 gene of skin tumors from DNA-repair deficient xeroderma pigmentosum patients
    • Dumaz, N., C. Drougard, A. Sarasin and A. L. Daya-Grosjean (1993) Specific UV-induced mutation spectrum in the p53 gene of skin tumors from DNA-repair deficient xeroderma pigmentosum patients. Proc. Natl. Acad. Sci. USA 90, 10529-10533.
    • (1993) Proc. Natl. Acad. Sci. USA , vol.90 , pp. 10529-10533
    • Dumaz, N.1    Drougard, C.2    Sarasin, A.3    Daya-Grosjean, A.L.4
  • 13
    • 0016818590 scopus 로고
    • Inducible error-prone repair in Echerichia coli
    • Sedgwick, S. G. (1975) Inducible error-prone repair in Echerichia coli. Proc. Natl. Acad. Sci. USA 72, 2753-2757.
    • (1975) Proc. Natl. Acad. Sci. USA , vol.72 , pp. 2753-2757
    • Sedgwick, S.G.1
  • 14
    • 0030111234 scopus 로고    scopus 로고
    • UV damage and repair mechanisms in mammalian cells
    • Tornaletti, S. and G. P. Pfeifer (1996) UV damage and repair mechanisms in mammalian cells. Bioassays 18, 221-228.
    • (1996) Bioassays , vol.18 , pp. 221-228
    • Tornaletti, S.1    Pfeifer, G.P.2
  • 15
    • 0030700737 scopus 로고    scopus 로고
    • The consequence of translesional replication of unique UV-induced photoproducts
    • Gentil, A., F. Le Page and A. Sarasin (1997) The consequence of translesional replication of unique UV-induced photoproducts. Biol. Chem. 378, 1287-1292.
    • (1997) Biol. Chem. , vol.378 , pp. 1287-1292
    • Gentil, A.1    Le Page, F.2    Sarasin, A.3
  • 16
    • 0024541253 scopus 로고
    • Template length, sequence context, and 3′→5′ exonuclease activity modulate replicative bypass of thymine glycol lesions in vitro
    • Clark, J. M. and G. P. Beardsley (1989) Template length, sequence context, and 3′→5′ exonuclease activity modulate replicative bypass of thymine glycol lesions in vitro. Biochemistry 28, 775-779.
    • (1989) Biochemistry , vol.28 , pp. 775-779
    • Clark, J.M.1    Beardsley, G.P.2
  • 17
    • 0024458717 scopus 로고
    • Sequence-specific pausing during in vitro DNA replication on double-stranded DNA templates
    • Bedinger, P., M. Munn and B. M. Alberts (1989) Sequence-specific pausing during in vitro DNA replication on double-stranded DNA templates. J. Biol. Chem. 264, 16880-16888.
    • (1989) J. Biol. Chem. , vol.264 , pp. 16880-16888
    • Bedinger, P.1    Munn, M.2    Alberts, B.M.3
  • 18
    • 0021921731 scopus 로고
    • Influence of template primary and secondary structure on the rate and fidelity of DNA synthesis
    • Hillebrand, G. G. and K. L. Beattie (1985) Influence of template primary and secondary structure on the rate and fidelity of DNA synthesis. J. Biol. Chem. 260, 3116-3125.
    • (1985) J. Biol. Chem. , vol.260 , pp. 3116-3125
    • Hillebrand, G.G.1    Beattie, K.L.2
  • 19
    • 0021112633 scopus 로고
    • Site-specific pausing of deoxyribonucleic acid synthesis catalyzed by four forms of Escherichia coli
    • LaDuca, R. J., P. J. Fay, C. Chuang, C. S. McHenry and R. A. Bambara (1983) Site-specific pausing of deoxyribonucleic acid synthesis catalyzed by four forms of Escherichia coli. Biochemistry 22, 5177-5188.
    • (1983) Biochemistry , vol.22 , pp. 5177-5188
    • LaDuca, R.J.1    Fay, P.J.2    Chuang, C.3    McHenry, C.S.4    Bambara, R.A.5
  • 20
    • 0023641840 scopus 로고
    • Conformational changes in the oligonucletide duplex d(GCGTTGCG)·d(CGCAACGC) induced by formation of cis-syn thymine dimer: Two dimensional NMR study
    • Kemmink, J., R. Boelens, T. Koning, G. A. Van der Marel, J. H. Van Boom and R. Kaptein (1987) Conformational changes in the oligonucletide duplex d(GCGTTGCG)·d(CGCAACGC) induced by formation of cis-syn thymine dimer: two dimensional NMR study. Eur. J. Biochem. 162, 37-43.
    • (1987) Eur. J. Biochem. , vol.162 , pp. 37-43
    • Kemmink, J.1    Boelens, R.2    Koning, T.3    Van der Marel, G.A.4    Van Boom, J.H.5    Kaptein, R.6
  • 21
    • 0025196845 scopus 로고
    • 1H assignment and melting temperature study of cis-syn and trans-syn thymine dimer containing duplexes of d(CGTATTATGC)·d(GCATAATACG)
    • 1H assignment and melting temperature study of cis-syn and trans-syn thymine dimer containing duplexes of d(CGTATTATGC)·d(GCATAATACG). Biochemistry 29, 8858-8866.
    • (1990) Biochemistry , vol.29 , pp. 8858-8866
    • Taylor, J.S.1    Garrett, D.S.2    Brockie, I.R.3    Svoboda, D.L.4    Telser, J.5
  • 24
    • 0028927254 scopus 로고
    • The solution structure of DNA duplex-decamer containing the (6-4) photoproduct of thymidylyl(3′→5′)thymidine by NMR and relaxation matrix refinement
    • Kim, J.-K. and B.-S. Choi (1995) The solution structure of DNA duplex-decamer containing the (6-4) photoproduct of thymidylyl(3′→5′)thymidine by NMR and relaxation matrix refinement. Eur. J. Biochem. 228, 849-854.
    • (1995) Eur. J. Biochem. , vol.228 , pp. 849-854
    • Kim, J.-K.1    Choi, B.-S.2
  • 25
    • 0029338999 scopus 로고
    • Contrasting structural impacts induced by cis-syn cyclobutane dimer and (6-4) adduct in DNA duplex decamers: Implication in mutagenesis and repair activity
    • Kim, J.-K., D. J. Patel and B.-S. Choi (1995) Contrasting structural impacts induced by cis-syn cyclobutane dimer and (6-4) adduct in DNA duplex decamers: implication in mutagenesis and repair activity. Photochem. Photobiol. 62, 44-50.
    • (1995) Photochem. Photobiol. , vol.62 , pp. 44-50
    • Kim, J.-K.1    Patel, D.J.2    Choi, B.-S.3
  • 26
    • 0030050520 scopus 로고    scopus 로고
    • NMR structural studies of DNA decamer duplex containing the Dewar product of thymidylyl(3′→5′) thymidine: Conformational changes of the oligonucleotide duplex by photoconversion of a (6-4) adduct to its Dewar valence isomer
    • Hwang, G.-S., J.-K. Kim and B.-S. Choi (1996) NMR structural studies of DNA decamer duplex containing the Dewar product of thymidylyl(3′→5′) thymidine: conformational changes of the oligonucleotide duplex by photoconversion of a (6-4) adduct to its Dewar valence isomer. Eur. J. Biochem. 235, 359-365.
    • (1996) Eur. J. Biochem. , vol.235 , pp. 359-365
    • Hwang, G.-S.1    Kim, J.-K.2    Choi, B.-S.3
  • 27
    • 0032500623 scopus 로고    scopus 로고
    • Solution-state structure of a DNA dodecamer duplex containing a cis-syn thymine cyclobutane dimmer, the major UV photoproduct of DNA
    • McAteer, K., Y. Jing, J. Kao, J.-S. Taylor and M. A. Kennedy (1998) Solution-state structure of a DNA dodecamer duplex containing a cis-syn thymine cyclobutane dimmer, the major UV photoproduct of DNA. J. Mol. Biol. 282, 1013-1032.
    • (1998) J. Mol. Biol. , vol.282 , pp. 1013-1032
    • McAteer, K.1    Jing, Y.2    Kao, J.3    Taylor, J.-S.4    Kennedy, M.A.5
  • 28
    • 0033535936 scopus 로고    scopus 로고
    • Solution structure of a DNA decamer duplex containing the stable 3′T·G base pair of the pyrimidine(6-4)pyrimidone photoproduct[(6-4)]adduct: Implications for the highly specific 3′T→C transition of the (6-4)adduct
    • Lee, J.-H., G.-S. Hwang and B.-S. Choi (1999) Solution structure of a DNA decamer duplex containing the stable 3′T·G base pair of the pyrimidine(6-4)pyrimidone photoproduct[(6-4)]adduct: implications for the highly specific 3′T→C transition of the (6-4)adduct. Proc. Natl. Acad. Sci. USA 96, 6632-6636.
    • (1999) Proc. Natl. Acad. Sci. USA , vol.96 , pp. 6632-6636
    • Lee, J.-H.1    Hwang, G.-S.2    Choi, B.-S.3
  • 29
    • 0034655575 scopus 로고    scopus 로고
    • Solution structure of the DNA decamer duplex containing a 3′-T·T base pair of the cis-syn cyclobutane pyrimidine dimmer: Implication for the mutagenic property of the cis-syn dimer
    • Lee, J.-H., Y.-J. Choi and B.-S. Choi (2000) Solution structure of the DNA decamer duplex containing a 3′-T·T base pair of the cis-syn cyclobutane pyrimidine dimmer: implication for the mutagenic property of the cis-syn dimer. Nucleic Acids Res. 28, 1794-1801.
    • (2000) Nucleic Acids Res. , vol.28 , pp. 1794-1801
    • Lee, J.-H.1    Choi, Y.-J.2    Choi, B.-S.3
  • 30
    • 0026329858 scopus 로고
    • Conformational variations of the cis-syn cyclobutane-type photodimer in DNA and RNA
    • Kim, J.-K. and J. L. Alderfer (1992) Conformational variations of the cis-syn cyclobutane-type photodimer in DNA and RNA. J. Biomol. Struct. Dyn. 9, 706-718.
    • (1992) J. Biomol. Struct. Dyn. , vol.9 , pp. 706-718
    • Kim, J.-K.1    Alderfer, J.L.2
  • 31
    • 0027578705 scopus 로고
    • Substituent effects of puckering mode of the cyclobutane ring and glycosidic bond of cis-syn photodimer
    • Kim, J.-K., J. C. Wallace and J. L. Alderfer (1993) Substituent effects of puckering mode of the cyclobutane ring and glycosidic bond of cis-syn photodimer. Biopolymers 33, 713-721.
    • (1993) Biopolymers , vol.33 , pp. 713-721
    • Kim, J.-K.1    Wallace, J.C.2    Alderfer, J.L.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.