메뉴 건너뛰기




Volumn 66, Issue 4, 2002, Pages 897-901

Organization and transcriptional characterization of catechol degradation genes involved in carbazole degradation by pseudomonas resinovorans strain CA10

Author keywords

Carbazole; Cat operon; Catechol; Pseudomonas resinovorans strain CA10

Indexed keywords

FELIS CATUS; INSERTION SEQUENCES; PROKARYOTA; PSEUDOMONAS; PSEUDOMONAS PUTIDA; PSEUDOMONAS RESINOVORANS; TRANSPOSONS;

EID: 0036545396     PISSN: 09168451     EISSN: 13476947     Source Type: Journal    
DOI: 10.1271/bbb.66.897     Document Type: Article
Times cited : (32)

References (21)
  • 2
    • 0029671089 scopus 로고    scopus 로고
    • Isolation and characterization of Tn5-induced mutants deficient in carbazole catabolism
    • Kimura, T., Zhang, Y., Kodama, T., and Omori, T., Isolation and characterization of Tn5-induced mutants deficient in carbazole catabolism. FEMS Microbiol. Lett., 135, 65-70 (1996).
    • (1996) FEMS Microbiol. Lett. , vol.135 , pp. 65-70
    • Kimura, T.1    Zhang, Y.2    Kodama, T.3    Omori, T.4
  • 3
    • 0030744612 scopus 로고    scopus 로고
    • Identification and characterization of genes encoding carbazole 1,9a-dioxygenase in Pseudomonas sp. Strain CA10
    • Sato, S., Nam, J.-W., Kasuga, K., Nojiri, H., Yamane, H., and Omori, T., Identification and characterization of genes encoding carbazole 1,9a-dioxygenase in Pseudomonas sp. strain CA10. J. Bacteriol., 179, 4850-4858 (1997).
    • (1997) J. Bacteriol. , vol.179 , pp. 4850-4858
    • Sato, S.1    Nam, J.-W.2    Kasuga, K.3    Nojiri, H.4    Yamane, H.5    Omori, T.6
  • 4
    • 0030855128 scopus 로고    scopus 로고
    • Cloning of genes involved in carbazole degradation of Pseudomonas sp. Strain CA10: Nucleotide sequences of genes and characterization of meta-cleavage enzymes and hydrolase
    • Sato, S., Ouchiyama, N., Kimura, T., Nojiri, H., Yamane, H., and Omori, T., Cloning of genes involved in carbazole degradation of Pseudomonas sp. strain CA10: Nucleotide sequences of genes and characterization of meta-cleavage enzymes and hydrolase. J. Bacteriol., 179, 4841-4849 (1997).
    • (1997) J. Bacteriol. , vol.179 , pp. 4841-4849
    • Sato, S.1    Ouchiyama, N.2    Kimura, T.3    Nojiri, H.4    Yamane, H.5    Omori, T.6
  • 5
    • 0034981075 scopus 로고    scopus 로고
    • Genetic characterization and evolutionary implications of car gene cluster in the carbazole-degrader, Pseudomonas sp. Strain CA10
    • Nojiri, H., Sekiguchi, H., Maeda, K., Urata, M., Nakai, S., Yoshida, T., Habe, H., and Omori, T., Genetic characterization and evolutionary implications of car gene cluster in the carbazole-degrader, Pseudomonas sp. strain CA10. J. Bacteriol., 183, 3663-3679 (2001).
    • (2001) J. Bacteriol. , vol.183 , pp. 3663-3679
    • Nojiri, H.1    Sekiguchi, H.2    Maeda, K.3    Urata, M.4    Nakai, S.5    Yoshida, T.6    Habe, H.7    Omori, T.8
  • 6
    • 0021943518 scopus 로고
    • Improved M13 phage cloning vectors and host strains: Nucleotide sequences of the M13mp18 and pUC19 vectors
    • Yanisch-perron, C., Vieira, J., and Messing, J., Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors. Gene, 33, 103-119 (1985).
    • (1985) Gene , vol.33 , pp. 103-119
    • Yanisch-Perron, C.1    Vieira, J.2    Messing, J.3
  • 7
    • 0024284551 scopus 로고
    • 1ZAP: A bacteriophage l expression vector with in vivo excision properties
    • Short, J. M., Fernandez, J. M., Sorge, J. A., and Huse, W. D., 1ZAP: a bacteriophage l expression vector with in vivo excision properties. Nucl. Acids Res., 16, 7583-7600 (1988).
    • (1988) Nucl. Acids Res. , vol.16 , pp. 7583-7600
    • Short, J.M.1    Fernandez, J.M.2    Sorge, J.A.3    Huse, W.D.4
  • 9
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrix choice
    • Thompson, J. D., Higgins, D. G., and Gibson, T. J., CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrix choice. Nucl. Acids Res., 22, 4673-4680 (1994).
    • (1994) Nucl. Acids Res. , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 11
    • 0033590643 scopus 로고    scopus 로고
    • Cloning and sequence analysis of two catechol-degrading gene clusters from the aniline-assimilating bacterium Frateuria species ANA-18
    • Murakami, S., Takashima, A., Takemoto, J., Takenaka, S., Shinke, R., and Aoki, K., Cloning and sequence analysis of two catechol-degrading gene clusters from the aniline-assimilating bacterium Frateuria species ANA-18. Gene, 226, 189-198 (1999).
    • (1999) Gene , vol.226 , pp. 189-198
    • Murakami, S.1    Takashima, A.2    Takemoto, J.3    Takenaka, S.4    Shinke, R.5    Aoki, K.6
  • 14
    • 0031969092 scopus 로고    scopus 로고
    • Transcriptional repression mediated by LysR-type regulator CatR bound at multiple binding sites
    • Chugani, S. A., Parsek, M. R., and Chakrabarty, A. M., Transcriptional repression mediated by LysR-type regulator CatR bound at multiple binding sites. J. Bacteriol., 180, 2367-2372 (1998).
    • (1998) J. Bacteriol. , vol.180 , pp. 2367-2372
    • Chugani, S.A.1    Parsek, M.R.2    Chakrabarty, A.M.3
  • 15
    • 0026544125 scopus 로고
    • Conserved motifs in a divergent nod box of Azorhizobium caulinodans PRS571 reveal a common structure in promoters regulated by LysR-type proteins
    • 1992
    • Goethals, K., Van Montagu, M., and Holsters, M., 1992. Conserved motifs in a divergent nod box of Azorhizobium caulinodans PRS571 reveal a common structure in promoters regulated by LysR-type proteins. Proc. Natl. Acad. Sci. USA, 89, 1646-1650 (1992).
    • (1992) Proc. Natl. Acad. Sci. USA , vol.89 , pp. 1646-1650
    • Goethals, K.1    Van Montagu, M.2    Holsters, M.3
  • 16
    • 0032570025 scopus 로고    scopus 로고
    • Transcriptional activation of the catechol and chlorocatechol operons: Variations on a theme
    • McFall, S. M., Chugani, A. A., and Chakrabarty, A. M., Transcriptional activation of the catechol and chlorocatechol operons: variations on a theme. Gene, 223, 257-267 (1998).
    • (1998) Gene , vol.223 , pp. 257-267
    • McFall, S.M.1    Chugani, A.A.2    Chakrabarty, A.M.3
  • 17
    • 0000117110 scopus 로고    scopus 로고
    • Repeated sequence
    • Neidhardt, F. C., Curtis III, R., Ingraham, J. L., Lin, E. C. C., Low, K. B., Magasanik, B., Reznikoff, W. S., Riley, M., Shaechter, M., and Umbarger, H. E., American Society for Microbiology, Washington, D.C
    • Bachellier, S., Gilson, E., Hofnung, M., and Hill, C. W., Repeated sequence. In “Escherichia coli and Salmonella: cellular and molecular biology, 2nd ed.”, eds. Neidhardt, F. C., Curtis III, R., Ingraham, J. L., Lin, E. C. C., Low, K. B., Magasanik, B., Reznikoff, W. S., Riley, M., Shaechter, M., and Umbarger, H. E., American Society for Microbiology, Washington, D.C., pp. 2012-2040 (1996).
    • (1996) Escherichia Coli and Salmonella: Cellular and Molecular Biology, 2Nd Ed. , pp. 2012-2040
    • Bachellier, S.1    Gilson, E.2    Hofnung, M.3    Hill, C.W.4
  • 18
    • 0025815884 scopus 로고
    • Isolation and characterization of catabolic repression control mutants of Pseudomonas aeruginosa PAO
    • Wolff, J. A., MacGregor, C. H., Eisenberg, R. C., and Phibbs, P. V. Jr., Isolation and characterization of catabolic repression control mutants of Pseudomonas aeruginosa PAO. J. Bacteriol., 173, 4700-4706 (1991).
    • (1991) J. Bacteriol. , vol.173 , pp. 4700-4706
    • Wolff, J.A.1    Macgregor, C.H.2    Eisenberg, R.C.3    Phibbs, P.V.4
  • 19
    • 0030700662 scopus 로고    scopus 로고
    • A tricarboxylic acid cycle intermediate regulating transcription of a chloroaromatic biodegradative pathway: Fumarate-mediated repression of the clcABD operon
    • McFall, S. M., Abraham, B., Narsolis, C. G., and Chakrabarty, A. M., A tricarboxylic acid cycle intermediate regulating transcription of a chloroaromatic biodegradative pathway: fumarate-mediated repression of the clcABD operon. J. Bacteriol., 179, 6729-6735 (1997).
    • (1997) J. Bacteriol. , vol.179 , pp. 6729-6735
    • McFall, S.M.1    Abraham, B.2    Narsolis, C.G.3    Chakrabarty, A.M.4
  • 20
    • 0025139202 scopus 로고
    • Nucleotide sequencing and characterization of Pseudomonasputida catR: A positive regulator of the catBC operon is a member of the LysR family
    • Rothmel, R. K., Aldrich, T. L., Houghton, J. E., Coco, W. M., Ornston, L. N., and Chakrabarty, A. M., Nucleotide sequencing and characterization of Pseudomonasputida catR: a positive regulator of the catBC operon is a member of the LysR family. J. Bacteriol., 172, 922-931 (1990).
    • (1990) J. Bacteriol. , vol.172 , pp. 922-931
    • Rothmel, R.K.1    Aldrich, T.L.2    Houghton, J.E.3    Coco, W.M.4    Ornston, L.N.5    Chakrabarty, A.M.6
  • 21
    • 0027389217 scopus 로고
    • Nucleotide sequence and initial functional characterization of the clcR gene encoding a LysR family activator of the clcABD operon in Pseudomonas putida
    • Coco, W. M., Rothmel, R. K., Henikoff, S., and Chakrabarty, A. M., Nucleotide sequence and initial functional characterization of the clcR gene encoding a LysR family activator of the clcABD operon in Pseudomonas putida. J. Bacteriol., 175, 417-427 (1993).
    • (1993) J. Bacteriol. , vol.175 , pp. 417-427
    • Coco, W.M.1    Rothmel, R.K.2    Henikoff, S.3    Chakrabarty, A.M.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.