-
1
-
-
0032127258
-
Reductive evolution of resident genomes
-
Anderson & Kurland, C. G. (1998). Reductive evolution of resident genomes. Trends Microbiol. 6, 263-268.
-
(1998)
Trends Microbiol.
, vol.6
, pp. 263-268
-
-
Anderson1
Kurland, C.G.2
-
2
-
-
0031906148
-
Increased immune response elicited by DNA vaccination with a synthetic gp120 sequence with optimized codon usage
-
Andre, S., Seed, B., Eberle, J., Schraut, W., Bultmann, A. & Haas, J. (1998). Increased immune response elicited by DNA vaccination with a synthetic gp120 sequence with optimized codon usage. J. Virol. 72, 1497-1503.
-
(1998)
J. Virol.
, vol.72
, pp. 1497-1503
-
-
Andre, S.1
Seed, B.2
Eberle, J.3
Schraut, W.4
Bultmann, A.5
Haas, J.6
-
3
-
-
0020024572
-
Codon selection in yeast
-
Bennetzen, J. L. & Hall, B. D. (1982). Codon selection in yeast. J. Biol. Chem. 257, 3026-3031.
-
(1982)
J. Biol. Chem.
, vol.257
, pp. 3026-3031
-
-
Bennetzen, J.L.1
Hall, B.D.2
-
4
-
-
0034093106
-
Cervical lesions are associated with human papillomavirus type 16 intratypic variants that have high transcriptional activity and increased usage of common mammalian codons
-
Bible, J. M., Mant, C., Best, J. M., Kell, B., Starkey, W. G., Shanti Raju, K., Seed, P., Biswas, C., Muir, P., Banatvala, J. E. & Cason, J. (2000). Cervical lesions are associated with human papillomavirus type 16 intratypic variants that have high transcriptional activity and increased usage of common mammalian codons. J. Gen. Virol. 81(6), 1517-1527.
-
(2000)
J. Gen. Virol.
, vol.81
, Issue.6
, pp. 1517-1527
-
-
Bible, J.M.1
Mant, C.2
Best, J.M.3
Kell, B.4
Starkey, W.G.5
Shanti Raju, K.6
Seed, P.7
Biswas, C.8
Muir, P.9
Banatvala, J.E.10
Cason, J.11
-
5
-
-
0025941139
-
The selection-mutation-drift theory of synonymous codon usage
-
Bulmer, M. (1991). The selection-mutation-drift theory of synonymous codon usage. Genetics 129, 897-907.
-
(1991)
Genetics
, vol.129
, pp. 897-907
-
-
Bulmer, M.1
-
6
-
-
0345624489
-
Transfer RNA modification status influences retroviral ribosomal frameshifting
-
Carlson, B. A., Kwon, S. Y., Chamorro, M., Oroszlan, S., Hatfield, D. L. & Lee, B. J. (1999). Transfer RNA modification status influences retroviral ribosomal frameshifting. Virology 255, 2-8.
-
(1999)
Virology
, vol.255
, pp. 2-8
-
-
Carlson, B.A.1
Kwon, S.Y.2
Chamorro, M.3
Oroszlan, S.4
Hatfield, D.L.5
Lee, B.J.6
-
7
-
-
0029693807
-
The dynamical theory of coevolution: A derivation from stochastic ecological processes
-
Dieckmann, U. & Law, R. (1996). The dynamical theory of coevolution: a derivation from stochastic ecological processes. J. Math. Biol. 34, 579-612.
-
(1996)
J. Math. Biol.
, vol.34
, pp. 579-612
-
-
Dieckmann, U.1
Law, R.2
-
8
-
-
0028907619
-
Gratuitous overexpression of genes in Escherichia coli leads to growth inhibition and ribosome destruction
-
Dong, H., Nilsson, L. & Kurland, C. G. (1995). Gratuitous overexpression of genes in Escherichia coli leads to growth inhibition and ribosome destruction. J. Bacteriol. 177, 1497-1504.
-
(1995)
J. Bacteriol.
, vol.177
, pp. 1497-1504
-
-
Dong, H.1
Nilsson, L.2
Kurland, C.G.3
-
9
-
-
0030750055
-
Long term trends in the evolution of H(3) HA1 human influenza type A
-
Fitch, W. M., Bush, R. M., Bender, C. A. & Cox, N. J.(1997). Long term trends in the evolution of H(3) HA1 human influenza type A. Proc. Natl Acad. Sci. U.S.A. 94, 7712-7718.
-
(1997)
Proc. Natl. Acad. Sci. U.S.A.
, vol.94
, pp. 7712-7718
-
-
Fitch, W.M.1
Bush, R.M.2
Bender, C.A.3
Cox, N.J.4
-
10
-
-
0028578582
-
Recognition and polymorphism in host-parasite genetics
-
Frank, S. A. (1994). Recognition and polymorphism in host-parasite genetics. Philos. Trans. R. Soc. Lond. B Biol. Sci. 346, 283-293.
-
(1994)
Philos. Trans. R. Soc. Lond. B Biol. Sci.
, vol.346
, pp. 283-293
-
-
Frank, S.A.1
-
11
-
-
0031662136
-
The genetic code is one in a million
-
Freeland, S. J., Hurst, L. D. (1998). The genetic code is one in a million. J. Mol. Evol. 47, 238-248.
-
(1998)
J. Mol. Evol.
, vol.47
, pp. 238-248
-
-
Freeland, S.J.1
Hurst, L.D.2
-
12
-
-
0027218791
-
Folding of the MS2 coat protein in Escherichia coli is modulated by translational pauses resulting from mRNA secondary structure and codon usage: A hypothesis
-
Guisez, Y., Robbens, J., Remaut, E. & Fiers, W. (1993). Folding of the MS2 coat protein in Escherichia coli is modulated by translational pauses resulting from mRNA secondary structure and codon usage: a hypothesis. J. theor. Biol. 162, 243-252.
-
(1993)
J. Theor. Biol.
, vol.162
, pp. 243-252
-
-
Guisez, Y.1
Robbens, J.2
Remaut, E.3
Fiers, W.4
-
13
-
-
0030111265
-
Codon usage limitation in the expression of HIV-1 envelope glyco-protein
-
Haas, J., Park, E. C. & Seed, B. (1996). Codon usage limitation in the expression of HIV-1 envelope glyco-protein. Curr. Biol. 6, 315-324.
-
(1996)
Curr. Biol.
, vol.6
, pp. 315-324
-
-
Haas, J.1
Park, E.C.2
Seed, B.3
-
14
-
-
0026327996
-
A quantitative measure of error minimization in the genetic code
-
Haig, D. & Hurst, L. D. (1991). A quantitative measure of error minimization in the genetic code. J. Mol. Evol. 33, 412-417.
-
(1991)
J. Mol. Evol.
, vol.33
, pp. 412-417
-
-
Haig, D.1
Hurst, L.D.2
-
15
-
-
0025301417
-
Sexual selection as an adaptation to resist parasites
-
Hamilton, W. D., Axelrod, R. & Tanese, R. (1990). Sexual selection as an adaptation to resist parasites (a review). Proc. Natl Acad. Sci. U.S.A. 87, 3566-3573.
-
(1990)
Proc. Natl. Acad. Sci. U.S.A.
, vol.87
, pp. 3566-3573
-
-
Hamilton, W.D.1
Axelrod, R.2
Tanese, R.3
-
16
-
-
0026737980
-
Human hemoglobin expression in Escherichia coli: Importance of optimal codon usage
-
Hernan, R. A., Hui, H. L., Andracki, M. E., Noble, R. W., Sligar, S. G., Walder, J. A. & Walder, R. Y. (1992). Human hemoglobin expression in Escherichia coli: importance of optimal codon usage. Biochemistry 31, 8619-8628.
-
(1992)
Biochemistry
, vol.31
, pp. 8619-8628
-
-
Hernan, R.A.1
Hui, H.L.2
Andracki, M.E.3
Noble, R.W.4
Sligar, S.G.5
Walder, J.A.6
Walder, R.Y.7
-
17
-
-
0035036803
-
Evolution of base composition and codon usage bias in the genus flavivirus
-
Jenkins, G. M., Pagel, M., Gould, E. A., Zanotto, P. M. & Holmes, E. C. (2001). Evolution of base composition and codon usage bias in the genus flavivirus. J. Mol. Evol. 52, 383-390.
-
(2001)
J. Mol. Evol.
, vol.52
, pp. 383-390
-
-
Jenkins, G.M.1
Pagel, M.2
Gould, E.A.3
Zanotto, P.M.4
Holmes, E.C.5
-
18
-
-
0030569016
-
What drives codon choices in human genes?
-
Karlin, S. & Mrazek, J. (1996). What drives codon choices in human genes? J. Mol. Biol. 262, 459-472.
-
(1996)
J. Mol. Biol.
, vol.262
, pp. 459-472
-
-
Karlin, S.1
Mrazek, J.2
-
19
-
-
0025074342
-
Contrasts in codon usage of latent versus productive genes of Epstein- Barr virus: Data and hypotheses
-
Karlin, S., Blaisdell, B. E. & Schachtel, G. A. (1990). Contrasts in codon usage of latent versus productive genes of Epstein- Barr virus: data and hypotheses. J. Virol 64, 4264-4273.
-
(1990)
J. Virol.
, vol.64
, pp. 4264-4273
-
-
Karlin, S.1
Blaisdell, B.E.2
Schachtel, G.A.3
-
20
-
-
0033152412
-
Selection, history and chemistry: The three faces of the genetic code
-
Knight, R. D., Freeland, S. J. & Landweber, L. F. (1999). Selection, history and chemistry: the three faces of the genetic code [see comments]. Trends Biochem. Sci. 24, 241-247.
-
(1999)
Trends Biochem. Sci.
, vol.24
, pp. 241-247
-
-
Knight, R.D.1
Freeland, S.J.2
Landweber, L.F.3
-
21
-
-
0011067239
-
Evolutionary principles of genomic compression
-
Krakauer, D. C. (2002). Evolutionary principles of genomic compression. Comm. theor. Biol.
-
(2002)
Comm. Theor. Biol.
-
-
Krakauer, D.C.1
-
22
-
-
0042492708
-
The modification of the wobble base of tRNAGlu modulates the translation rate of glutamic acid codon in vivo
-
Kruger, M. K., Pederson, S., Hagervall, T. G. & Soreson, M. A. (1998). The modification of the wobble base of tRNAGlu modulates the translation rate of glutamic acid codon in vivo. J. Mol. Evol. 284, 621-631.
-
(1998)
J. Mol. Evol.
, vol.284
, pp. 621-631
-
-
Kruger, M.K.1
Pederson, S.2
Hagervall, T.G.3
Soreson, M.A.4
-
23
-
-
0025763551
-
Codon bias and gene expression
-
Kurland, C. G. (1991). Codon bias and gene expression. FEBS Lett. 285, 165-169.
-
(1991)
FEBS Lett.
, vol.285
, pp. 165-169
-
-
Kurland, C.G.1
-
24
-
-
0030062876
-
Codon adjustment to maximize heterologous gene expression in Streptomyces lividans can lead to decreased mRNA stability and protein yield
-
Lammertyn, E., Van Mellaert, L., Bijnens, A. P., Joris, B. & Anne, J. (1996). Codon adjustment to maximize heterologous gene expression in Streptomyces lividans can lead to decreased mRNA stability and protein yield. Mol. Gen. Genet. 250, 223-229.
-
(1996)
Mol. Gen. Genet.
, vol.250
, pp. 223-229
-
-
Lammertyn, E.1
Van Mellaert, L.2
Bijnens, A.P.3
Joris, B.4
Anne, J.5
-
25
-
-
0001288442
-
Quantitative genetics analysis of multivariate evolution, applies to brain: Body size allometry
-
Lande, R. (1979). Quantitative genetics analysis of multivariate evolution, applies to brain: body size allometry. Evolution 33, 402-416.
-
(1979)
Evolution
, vol.33
, pp. 402-416
-
-
Lande, R.1
-
26
-
-
0029828233
-
Strategies for achieving high-level expression of genes in Escherichia coli
-
Makrides, S. C. (1996). Strategies for achieving high-level expression of genes in Escherichia coli. Microbiol. Rev. 60, 512-538.
-
(1996)
Microbiol. Rev.
, vol.60
, pp. 512-538
-
-
Makrides, S.C.1
-
27
-
-
0032488826
-
A novel wobble rule found in starfish mitochondria. Presence of 7-methylguanosine at the anticodon wobble position expands decoding capability of tRNA
-
Matsuyama, S., Ueda, T., Crain, P. F., McCloskey, J. A. & Watanabe, K. (1998). A novel wobble rule found in starfish mitochondria. Presence of 7-methylguanosine at the anticodon wobble position expands decoding capability of tRNA. J. Biol. Chem. 273, 3363-3368.
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 3363-3368
-
-
Matsuyama, S.1
Ueda, T.2
Crain, P.F.3
McCloskey, J.A.4
Watanabe, K.5
-
28
-
-
0027084786
-
How should we define fitness for general ecological scenarios
-
Metz, J. A. J., Nisbet, R. M. & Geritz, S. A. H. (1992). How should we define fitness for general ecological scenarios. Trends Ecol. Evol. 7, 198-202.
-
(1992)
Trends Ecol. Evol.
, vol.7
, pp. 198-202
-
-
Metz, J.A.J.1
Nisbet, R.M.2
Geritz, S.A.H.3
-
29
-
-
0032925775
-
The effect of queuosine on tRNA structure and function
-
Morris, R. C., Brown, K. G. & Elliott, M. S. (1999) The effect of queuosine on tRNA structure and function. J. Biomol. Struct. Dynamics 16, 757-774.
-
(1999)
J. Biomol. Struct. Dynamics
, vol.16
, pp. 757-774
-
-
Morris, R.C.1
Brown, K.G.2
Elliott, M.S.3
-
30
-
-
0028995759
-
On evolutionarily stable life histories, optimization and the need to be specific about density dependence
-
Mylius, S. D. & Diekmann, O. (1995). On evolutionarily stable life histories, optimization and the need to be specific about density dependence. Oikos 74, 218-224.
-
(1995)
Oikos
, vol.74
, pp. 218-224
-
-
Mylius, S.D.1
Diekmann, O.2
-
31
-
-
17444449538
-
Transfer RNA gene redundancy and translational selection in Saccharomyces cerevisiae
-
Percudani, R., Pavesi, A. & Ottonello, S. (1997). Transfer RNA gene redundancy and translational selection in Saccharomyces cerevisiae. J. Mol. Biol. 268, 322-330.
-
(1997)
J. Mol. Biol.
, vol.268
, pp. 322-330
-
-
Percudani, R.1
Pavesi, A.2
Ottonello, S.3
-
32
-
-
0029451480
-
Codon usage in the prototype baculovirus - Autographa californica nuclear polyhedrosis virus
-
Ranjan, A. & Hasnain, S. E. (1995). Codon usage in the prototype baculovirus-Autographa californica nuclear polyhedrosis virus. Ind. J. Biochem. Biophys. 32, 424-428.
-
(1995)
Ind. J. Biochem. Biophys.
, vol.32
, pp. 424-428
-
-
Ranjan, A.1
Hasnain, S.E.2
-
33
-
-
0027715731
-
Codon usage: Mutational bias, translational selection, or both?
-
Sharp, P. M., Stenico, M., Peden, J. F. & Lloyd, A. T. (1993). Codon usage: mutational bias, translational selection, or both? Biochem. Soc. Trans. 21, 835-841.
-
(1993)
Biochem. Soc. Trans.
, vol.21
, pp. 835-841
-
-
Sharp, P.M.1
Stenico, M.2
Peden, J.F.3
Lloyd, A.T.4
-
34
-
-
0029654101
-
DNA sequence evolution: The sounds of silence
-
Sharp, P. M., Averof, M., Lloyd, A. T., Matassi, G. & Peden, J. F. (1995). DNA sequence evolution: the sounds of silence. Philos. Trans. R. Soc. Lond. B Biol. Sci. 349, 241-247.
-
(1995)
Philos. Trans. R. Soc. Lond. B Biol. Sci.
, vol.349
, pp. 241-247
-
-
Sharp, P.M.1
Averof, M.2
Lloyd, A.T.3
Matassi, G.4
Peden, J.F.5
-
35
-
-
0023433698
-
Selection of mutations that increase alpha 1-antitrypsin gene expression in Escherichia coli
-
Sutiphong, J., Johansen, H., Sathe, G., Rosenberg, G. S. & Shatzman, A. (1987). Selection of mutations that increase alpha 1-antitrypsin gene expression in Escherichia coli. Mol. Biol. Med. 4, 307-322.
-
(1987)
Mol. Biol. Med.
, vol.4
, pp. 307-322
-
-
Sutiphong, J.1
Johansen, H.2
Sathe, G.3
Rosenberg, G.S.4
Shatzman, A.5
-
36
-
-
0035209206
-
Dangerous liaison: The ecology of private interest and common good
-
van Baalen, M. & Jansen, V. A. A. (2001). Dangerous liaison: the ecology of private interest and common good. Oikos 95, 211-224.
-
(2001)
Oikos
, vol.95
, pp. 211-224
-
-
Van Baalen, M.1
Jansen, V.A.A.2
-
37
-
-
0002027029
-
A new evolutionary law
-
Van Valen, L. M. (1973). A new evolutionary law. Evol. Theory 1, 1-30.
-
(1973)
Evol. Theory
, vol.1
, pp. 1-30
-
-
Van Valen, L.M.1
-
38
-
-
0025318864
-
The 'effective number of codons' used in a gene
-
Wright, F. (1990a). The 'effective number of codons' used in a gene. Gene 87, 23-29.
-
(1990)
Gene
, vol.87
, pp. 23-29
-
-
Wright, F.1
-
40
-
-
0031805147
-
How optimized is the translational machinery in Escherichia coli, Salmonella typhimurium and Saccharomyces cerevisiae?
-
Xia, X. (1998). How optimized is the translational machinery in Escherichia coli, Salmonella typhimurium and Saccharomyces cerevisiae? Genetics 149, 37-44.
-
(1998)
Genetics
, vol.149
, pp. 37-44
-
-
Xia, X.1
-
41
-
-
0345188623
-
Papillomavirus capsid protein expression level depends on the match between codon usage and tRNA availability
-
Zhou, J., Liu, W. J., Peng, S. W., Sun, X. Y. & Frazer, I. (1999). Papillomavirus capsid protein expression level depends on the match between codon usage and tRNA availability. J. Virol. 73, 4972-4982.
-
(1999)
J. Virol.
, vol.73
, pp. 4972-4982
-
-
Zhou, J.1
Liu, W.J.2
Peng, S.W.3
Sun, X.Y.4
Frazer, I.5
-
42
-
-
0345188623
-
Papillomavirus capsid protein expression level depends on the match between codon usage and tRNA availability
-
Zhou, J., Liu, W. J., Peng, S. W., Sun, X. Y. & Frazer, I. (1999). Papillomavirus capsid protein expression level depends on the match between codon usage and tRNA availability. J. Virol. 73, 4972-4982.
-
(1999)
J. Virol.
, vol.73
, pp. 4972-4982
-
-
Zhou, J.1
Liu, W.J.2
Peng, S.W.3
Sun, X.Y.4
Frazer, I.5
-
43
-
-
0034056240
-
Increased expression and immunogenicity of sequence-modified human immunodeficiency virus type 1 gag gene
-
zur Megede, J., Chen, M. C., Doe, B., Schaefer, M., Greer, C. E., Selby, M., Otten, G. R. & Barnett, S. W. (2000). Increased expression and immunogenicity of sequence-modified human immunodeficiency virus type 1 gag gene. J. Virol. 74, 2628-2635.
-
(2000)
J. Virol.
, vol.74
, pp. 2628-2635
-
-
Zur Megede, J.1
Chen, M.C.2
Doe, B.3
Schaefer, M.4
Greer, C.E.5
Selby, M.6
Otten, G.R.7
Barnett, S.W.8
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