Histone acetylation and chromatin remodeling: Which comes first?

Molecular Genetics and Metabolism

Volumn 76, Issue 1, 2002, Pages 1-5

  Neely, Kristen E ^a   Workman, Jerry L ^a  

^a PENNSYLVANIA STATE UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ADENOSINE TRIPHOSPHATE; BETA INTERFERON; HISTONE ACETYLTRANSFERASE; RETINOIC ACID RECEPTOR ALPHA; RETINOID X RECEPTOR; RNA POLYMERASE II;

ACETYLATION; CHROMATIN; ENZYME ACTIVITY; GENE DELETION; GENE EXPRESSION; GENE INACTIVATION; GENE MUTATION; GENETIC TRANSCRIPTION; IMMUNOPRECIPITATION; PRIORITY JOURNAL; PROMOTER REGION; SHORT SURVEY;

EID: 0036382883     PISSN: 10967192     EISSN: None     Source Type: Journal    
DOI: 10.1016/S1096-7192(02)00014-8     Document Type: Article

References (32)

1. M. Vignali, A.H. Hassan, K.E. Neely, J.L. Workman, ATP-dependent chromatin remodeling complexes, Mol. Cell. Biol. 20 (2000) 1899-1910.
2. R.E. Kingston, G.J. Narlikar, ATP-dependent remodeling and acetylation as regulators of chromatin fluidity, Genes Dev. 13 (1999) 2339-2352.
3. S.Y. Roth, J.M. Denu, C.D. Allis, Histone acetyltransferases, Annu. Rev. Biochem. 70 (2001) 81-120.
4. S.R. Biggar, G.R. Crabtree, Continuous and widespread roles for the SWI-SNF complex in transcription, EMBO J. 18 (1999) 2254-2264.
5. K.J. Pollard, C.L. Peterson, Role for ADA/GCN5 products in antagonizing chromatin-mediated transcriptional repression, Mol. Cell. Biol. 17 (1997) 6212-6222.
6. S.M. Roberts, F. Winston, Essential functional interactions of SAGA, a Saccharomyces cerevisiae complex of Spt Ada and Gcn5 proteins with the Snf/Swi and Srb/mediator complexes, Genetics 147 (1997) 451-465.
7. J. Recht, M.A. Osley, Mutations in both the structural domain and N-terminus of histone H2B bypass the requirement for Swi-Snf in yeast, EMBO J. 18 (1999) 229-240.
8. P. Sudarsanam, Y. Cao, L. Wu, B.C. Laurent, F. Winston, The nucleosome remodeling complex Snf/Swi is required for the maintenance of transcription in vivo and is partially redundant with the histone acetyltransferase Gcn5, EMBO J. 18 (1999) 3101-3106.
9. P.W. Sternberg, M.J. Stern, I. Clark, I. Herskowitz, Activation of the yeast HO gene by release from multiple negative controls, Cell 48 (1987) 567-577.
10. W. Kruger, I. Herskowitz, A negative regulator of HO transcription SIN1 (SPT2), is a nonspecific DNA-binding protein related to HMG1, Mol. Cell. Biol. 11 (1991) 4135-4146.
11. W. Kruger, C.L. Peterson, A. Sil, C. Coburn, G. Arents, E.N. Moudrianakis, I. Herskowitz, Amino acid substitutions in structured domains of histones H3 and H4 partially relieve the requirement of the yeast SWI/SNF complex for transcription, Genes Dev. 9 (1995) 2770-2779.
12. K.E. Neely, A.H. Hassan, C.E. Brown, L. Howe, J.L. Workman, Transcription activator interactions with multiple SWI/SNF subunits, Mol. Cell. Biol. 22 (2002) 1615-1625.
13. K.E. Neely, A.H. Hassan, A.E. Wallberg, D.J. Steger, B.R. Cairns, A.P.H. Wright, J.L. Workman, Activation domain-mediated targeting of the SWI/SNF complex to promoters stimulates transcription from nucleosome arrays, Mol. Cell 4 (1999) 649-655.
14. K. Natarajan, B.M. Jackson, H. Zhou, F. Winston, A.G. Hinnebusch, Transcriptional activation by Gcn4p involves independent interactions with the SWI/SNF complex and the SRB/Mediator, Mol. Cell 4 (1999) 657-664.
15. J.E. Krebs, C.J. Fry, M.L. Samuels, C.L. Peterson, Global role for chromatin remodeling enzymes in mitotic gene expression, Cell 102 (2000) 587-598.
16. R.T. Utley, K. Ikeda, P.A. Grant, J. Côté, D.J. Steger, A. Eberharter, S. John, J.L. Workman, Transcriptional activators direct histone acetyltransferase complexes to nucleosomes, Nature 394 (1998) 498-502.
17. N. Yudkovsky, C. Logie, S. Hahn, C.L. Peterson, Recruitment of the SWI/SNF chromatin remodeling complex by transcriptional activators, Genes Dev. 13 (1999) 2369-2374.
18. C.E. Brown, L. Howe, K. Sousa, S.C. Alley, M.J. Carrozza, S. Tan, J.L. Workman, Recruitment of HAT complexes by direct activator interactions with the ATM-related Tra1 subunit, Science 292 (2001) 2333-2337.
19. K. Ikeda, D.J. Steger, A. Eberharter, J.L. Workman, Activation domain-specific and general transcription stimulation by native histone acetyltransferase complexes, Mol. Cell. Biol. 19 (1999) 855-863.
20. R.H. Jacobson, A.G. Ladurner, D.S. King, R. Tjian, Structure and function of a human TAFII250 double bromodomain module, Science 288 (2000) 1422-1425.
21. C. Dhalluin, J.E. Carlson, L. Zeng, C. He, A.K. Aggarwal, M.M. Zhou, Structure and ligand of a histone acetyltransferase bromodomain, Nature 399 (1999) 491-496.
22. P. Syntichaki, I. Topalidou, G. Thireos, The Gcn5 bromodomain co-ordinates nucleosome remodelling, Nature 404 (2000) 414-417.
23. A.H. Hassan, K.E. Neely, J.L. Workman, Histone acetyltransferase complexes stabilize SWI/SNF binding to promoter nucleosomes, Cell 104 (2001) 817-827.
24. H. Reinke, P.D. Gregory, W. Hörz, A transient histone hyperacetylation signal marks nucleosomes for remodeling at the PHO8 promoter in vivo, Mol. Cell 7 (2001) 529-538.
25. P.D. Gregory, A. Schmid, M. Zavari, M. Münsterkötter, W. Hörz, Chromatin remodelling at the PHO8 promoter requires SWI-SNF and SAGA at a step subsequent to activator binding, EMBO J. 18 (1999) 6407-6414.
26. T. Agalioti, S. Lomvardas, B. Parekh, J. Yie, T. Maniatis, D. Thanos, Ordered recruitment of chromatin modifying and general transcription factors to the IFN-β promoter, Cell 103 (2000) 667-678.
27. F.J. Dilworth, C. Fromental-Ramain, K. Yamamoto, P. Chambon, ATP-driven chromatin remodeling activity and histone acetyltransferases act sequentially during transcription by RAR/RXR in vitro, Mol. Cell 6 (2000) 1049-1058.
28. J. DiRenzo, Y. Shang, M. Phelan, S. Sif, M. Myers, R. Kingston, M. Brown, BRG-1 is recruited to estrogen-responsive promoters and cooperates with factors involved in histone acetylation, Mol. Cell. Biol. 20 (2000) 7541-7549.
29. G. Mizuguchi, A. Vassilev, T. Tsukiyama, Y. Nakatani, C. Wu, ATP-dependent nucleosome remodeling and histone hyperacetylation synergistically facilitate transcription of chromatin, J. Biol. Chem. 276 (2001) 14773-14783.
30. M.P. Cosma, T. Tanaka, K. Nasmyth, Ordered recruitment of transcription and chromatin remodeling factors to a cell cycle- and developmentally regulated promoter, Cell 97 (1999) 299-311.
31. J.E. Krebs, M.H. Kuo, C.D. Allis, C.L. Peterson, Cell cycle-regulated histone acetylation required for expression of the yeast HO gene, Genes Dev. 13 (1999) 1412-1421.
32. T. Ito, T. Ikehara, T. Nakagawa, W.L. Kraus, M. Muramatsu, p300-Mediated acetylation facilitates the transfer of histone H2A-H2B dimers from nucleosomes to a histone chaperone, Genes Dev. 14 (2000) 1899-1907.