Phylogenetic relationships in the Gesnerioideae (Gesneriaceae) based on nrDNA ITS and cpDNA trnL-F and trnE-T spacer region sequences

American Journal of Botany

Volumn 89, Issue 2, 2002, Pages 296-311

  Zimmer, Elizabeth A ^a   Roalson, Eric H ^a   Skog, Laurence E ^a   Boggan, John K ^a   Idnurm, Alexander ^a  

^a DEPARTMENT OF PALEOBIOLOGY   (United States)

Author keywords

Gesneriaceae; Gesnerioideae; ITS; Molecular phylogenetics; TrnE T; TrnL F

Indexed keywords

DNA; PHYLOGENETICS;

BESLERIEAE; EMBRYOPHYTA; GESNERIACEAE; GESNERIEAE; GESNERIOIDEAE; GLOXINIA; GLOXINIA SARMENTIANA; NAPEANTHEAE; PALIAVANA; SINNINGIA; VANHOUTTEA;

EID: 0036186695     PISSN: 00029122     EISSN: None     Source Type: Journal    
DOI: 10.3732/ajb.89.2.296     Document Type: Article

References (61)

1. An ordinal classification of the families of flowering plants
2. Phylogenetic utility of the internal transcribed spacers of nuclear ribosomal DNA in plants: An example from the Compositae
3. The ITS region of nuclear ribosomal DNA: A valuable source of evidence on angiosperm phylogeny
4. Classification of the family Gesneriaceae
5. Révision taxonomique d'un genre de Gesneriaceae endémique du Brésil: Nematanthus Schrader
6. Révision taxonomique et possibilités d'hybridations de Nematanthus Schrader (Gesneriaceae), genre endémique de la fôret côtière brésilienne
7. High intraindividual variation in internal transcribed spacer sequences in Aeschynanthus (Gesneriaceae): Implications for phylogenetics
8. Separate versus combined analysis of pbylogenetic evidence
9. A re-examination of Sanango racemosum. 2. Vegetative and floral anatomy
10. Chloroplast DNA inversions and the origin of the grass family (Poaceae)
11. A rapid DNA isolation procedure for small quantities of fresh leaf tissue
12. Parsimony jackknifing outperforms neighbor-joining
13. Constructing a significance test for incongruence
14. Gesneriaceae
15. Gloxinia stolonifera
16. Maximum likelihood estimation of the heterogeneity of substitution rate among nucleotide sites
17. A re-examination of Sanango racemosum. 3. Chemotaxonomy
18. Phylogenetic inference in Saxifragaceae sensu stricto and Gilia (Polemoniaceae) using matK sequences
19. Estimation of evolutionary distances between homologous nucleotide sequences
20. Revision of Kohleria (Gesneriaceae)
21. The genus Columnea (Gesneriaceae) in Ecuador
22. Revision of Pearcea (Gesneriaceae)
23. Phylogenetic systematics of Ipomoea (Convolvulaceae) based on ITS and waxy sequences
24. Comparison of three methods for estimating internal support on phylogenetic trees
25. A re-examination of Sanango racemosum. 1. Morphology and distribution
26. A parsimony analysis of the Asteridae sensu lato based on rbcL sequences
27. Disintegration of the Scrophulariaceae
28. The phylogeny of the Asteridae sensu lato based on chloroplast ndhF gene sequences
29. Relationships of the Buddlejaceae s.l. investigated using parsimony jackknife and branch support analysis of chloroplast ndhF and rbcL sequence data
30. Modeltest: Testing the model of DNA substitution
31. Supraspecific classification of Eleocharis (Cyperaceae) revisited: Evidence from the internal transcribed spacer (ITS) region of nuclear ribosomal DNA
32. ×Glokeria 'Dragonsong': A new intergeneric hybrid
33. A study of the tribe Gesnerieae, with a revision of Gesneria (Gesneriaceae: Gesnerioideae)
34. A review of chromosome numbers in the Gesneriaceae
35. Revision of Gasteranthus (Gesneriaceae)
36. Systematics of Columnea section Pentadenia and section Stygnanthe (Gesneriaceae)
37. Tribal relationships within the Gesneriaceae: A cladistic analysis of morphological data
38. A phylogenetic analysis of tribes Beslerieae and Napeantheae (Gesneriaceae) and evolution of fruit types: Parsimony and maximum likelihood analyses of ndhF sequences
39. Phylogenetic resolution within the tribe Episcieae (Gesneriaceae): Congruence of ITS and ndhF sequences from parsimony and maximum-likelihood analyses
40. Phylogenetic signal common to three data sets: Combining data which initially appear heterogeneous
41. Phylogenetic analysis of the tribes Gloxinieae and Gesnerieae (Gesneriaceae): Data from ndhF sequences
42. Tribal relationships within the Gesneriaceae: An assessment of three data sets
43. Familial placement of Cyrtandromoea, Titanotrichum and Sanango, three problematic genera of the Lamiales
44. A cladistic analysis of the tribe Episcieae (Gesneriaceae) based on ndhF sequences: Origin of morphological characters
45. Tribal relationships in the Gesneriaceae: Evidence from DNA sequences of the chloroplast gene ndhF
46. Molecular evolution and phylogenetic implications of internal transcribed spacer sequences of ribosomal DNA in Winteraceae
47. Universal primers for amplification of three non-coding regions of chloroplast DNA
48. A new method to localize and test the significance of incongruence: Detecting domain shuffling in the nuclear receptor superfamily
49. Gesneriaceae
50. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics
51. A report on the classification of Achimenes, Eucodonia, Gloxinia, Goyazia, and Anetanthus (Gesneriaceae)
52. New genera and species of Gesneriaceae from the Neotropics
53. Parakohleria, a new South American genus in the Gesneriaceae
54. A synopsis of the neotropical Gesneriaceae
55. A re-examination of Sanango racemosum. 4. Its new systematic position in the Gesneriaceae
56. Estimating the pattern of nucleotide substitution
57. Maximum likelihood phylogenetic estimation from DNA sequences with variable rates over sites: Approximate methods