Effects of transgenic glufosinate-tolerant oilseed rape (Brassica napus) and the associated herbicide application on eubacterial and Pseudomonas communities in the rhizosphere

FEMS Microbiology Ecology

Volumn 41, Issue 3, 2002, Pages 181-190

  Gyamfi, Stephen ^a   Pfeifer, Ulrike ^a   Stierschneider, Michael ^a   Sessitsch, Angela ^a  

^a ARC SEIBERSDORF RESEARCH GMBH   (Austria)

Author keywords

Basta; Butisan S; Denaturing gradient gel electrophoresis; pat gene; Rhizosphere; Transgenic oilseed rape

Indexed keywords

BACTERIAL DNA; BUTISAN S; DNA FRAGMENT; GLUFOSINATE; HERBICIDE; PRIMER DNA; RNA 16S; UNCLASSIFIED DRUG;

BACTERIUM; COMMUNITY STRUCTURE; HERBICIDE; TRANSGENIC PLANT;

ARTICLE; BACTERIAL FLORA; BACTERIAL GROWTH; BRASSICA; COMMUNITY STRUCTURE; CONTROLLED STUDY; CULTIVAR; DENATURING GRADIENT GEL ELECTROPHORESIS; DEVELOPMENTAL STAGE; DNA DETERMINATION; DNA FINGERPRINTING; DNA MODIFICATION; DNA SEQUENCE; ELECTROPHORESIS; EUBACTERIUM; FLOWERING; GENE AMPLIFICATION; GENETIC DIFFERENCE; HERBICIDE TOLERANCE; MICROBIAL IDENTIFICATION; NONHUMAN; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; PSEUDOMONAS; RHIZOSPHERE; ROOT EXUDATE; SENESCENCE; SOIL; TRANSGENIC PLANT; WEED;

BACTERIA (MICROORGANISMS); BRASSICA; BRASSICA NAPUS; MAGNOLIOPHYTA; PSEUDOMONAS;

EID: 0036049483     PISSN: 01686496     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0168-6496(02)00290-8     Document Type: Article

References (54)

1. Phosphinothricin und phosphinothricyl-alanyl-alanin
2. Identification and characterization of phosphinothricin-tripeptide biosynthetic genes in Streptomyces viridochromogenes
3. Interaction of soil microflora with the bioherbicide phosphinothricin
4. Influence of the herbicide phosphinothricin on growth and nodulation capacity of Rhizobium meliloti
5. Utilization of the herbicide phosphinotricin as a nitrogen source by soil bacteria
6. Initial steps in the degradation of phosphinotricin (Basta) by soil bacteria
7. Fate of the herbicide Basta-ammonium in the sandy, low-organic-carbon aquifer at CFB Borden, Ontario, Canada
8. 2 production
9. 14C]Basta ammonium in two Ontario soils
10. Phenotypic and genotypic characterization of phenanthrene-degrading fluorescent Pseudomonas biovars
11. Degradation of n-hexadecane and its metabolites by Pseudomonas aeruginosa under microaerobic and anaerobic denitrifying conditions
12. Isolation and characterization of a Pseudomonas sp. that mineralizes the s-triazine herbicide antrazine
13. Effect of phenylurea herbicides on soil microbial communities by analysis of 16S rRNA gene fingerprints and community-level physiological profiles
14. Human- and animal-pathogenic pseudomonads
15. Grouping of plant-pathogenic and some other Pseudomonas spp. by using cellular fatty acid profiles
16. Utilization of heterologous siderophores enhances levels of iron available to Pseudomonas putida in the rhizosphere
17. Conservation of the 2,4-diacetylphloroglucinol biosynthesis locus among fluorescent Pseudomonas strains from diverse geographic location
18. Genotypic and phenotypic diversity of phlD-containing Pseudomonas strains isolated from the rhizosphere of wheat
19. Impact of field release of genetically modified Pseudomonas fluorescens on indigenous microbial populations of wheat
20. Effect of two plant species, flax (Linum usitatissinum L.) and tomato (Lycopersicon esculentum Mill.), on the diversity of soilborne populations of fluorescent pseudomonads
21. Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA
22. Bacterial community changes and enrichment of Burkholderia-like bacteria induced by chlorinated benzoates in a peat-forest soil microcosm
23. Characterization of microbial diversity by determining terminal restriction length polymorphisms of genes encoding 16S rDNA
24. Microbial population structures in soil particle size fractions of a long-term fertilizer field experiment
25. A new approach to utilize PCR-single-strand-conformation-polymorphism for 16S rRNA gene-based microbial community analysis
26. Detection of viable, but non-culturable Pseudomonas fluorescens DF57 in soil using a microcolony epifluorescence technique
27. Survival of, and induced stress resistance in, carbon-starved Pseudomonas fluorescens cells residing in soil
28. Predominance of nonculturable cells of the biocontrol strain Pseudomonas fluorescens CHAO in the surface horizon of large outdoor lysimeters
29. Use of a simplified cell blot technique and 16S rRNA-directed probes for identification of common environmental isolates
30. A highly selective PCR protocol for detecting 16S rRNA genes of the genus Pseudomonas (sensu stricto) in environmental samples
31. Quantitative selective PCR of 16S ribosomal DNA correlates well with selective agar plating in describing population dynamics of indigenous Pseudomonas spp. in soil hot spots
32. Genetic analysis of sea-ice bacterial communities of the Western Baltic Sea using an improved double gradient method
33. Extraction of microbial community DNA from soils
34. 16S ribosomal DNA amplification for phylogenetic study
35. Mathematical model for studying genetic variation in terms of restriction endonucleases
36. TREECON for Windows: A software package for the construction and drawing of evolutionary trees for the Microsoft Windows environment
37. Basic local alignment tool
38. Analysis of actinomycete communities by specific amplification of genes encoding 16S rRNA and gel-electrophoretic separation in denaturating gradients
39. Increased killing of Bacillus subtilis on hair roots of transgenic T4-lysozyme-producing potatoes
40. Phenotypic and genotypic characterization of antagonistic bacteria associated with roots of transgenic and non-transgenic potato plants
41. Effects of T4 lysozyme release from transgenic potato roots on bacterial rhizosphere communities are negligible relative to natural factors
42. Bacterial diversity of the rhizosphere of maize (Zea mays) grown in tropical soil studied by temperature gradient gel electrophoresis
43. Analysis of bacterial communities in the rhizosphere of chrysanthemum via denaturating gradient gel electrophoresis of PCR-amplified 16S rRNA as well as DNA fragments coding for 16S rRNA
44. Selective influence of plant species on microbial diversity in the rhizosphere
45. Rhizosphere microbial community structure in relation to root location and plant iron nutritional status
46. Bacterial community composition in the rhizosphere of a transgenic, herbicide-resistant maize (Zea mays) and the comparison to its non-transgenic cultivar Bosphore
47. Differences in the microbial communities associated with the roots of different cultivars of canola and wheat
48. Diversity of bacterial communities in the rhizosphere and root interior of field-grown genetically modified Brassica napus
49. Einfluss des Anbaus von transgenem herbizidresistentem Raps auf das Agrar-Ökosystem
50. Changes in levels, species and DNA fingerprints of soil microorganisms associated with cotton expressing the Bacillus thuringiensis var. kurstaki endotoxin
51. Effects of herbicides and fumigants on microbial activities in soil
52. Frequency and biodiversity of 2,4-diacetylphloroglucinol-producing bacteria isolated from the maize rhizosphere at different stages of plant growth
53. Humus bacteria of Norway spruce stands: Plant growth promoting properties and birch, red fescue and alder colonizing capacity