Detection of Proteobacteria from the rumen by PCR using methanotroph-specific primers

Letters in Applied Microbiology

Volumn 35, Issue 3, 2002, Pages 251-255

  Mitsumori, M ^a   Ajisaka, N ^b   Tajima, K ^a   Kajikawa, H ^a   Kurihara, M ^a  

^a NATIONAL INSTITUTE OF LIVESTOCK AND GRASSLAND SCIENCE   (Japan)

^b Bio Research Corporation of Yokohama   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

CLONING;

COMMUNITY FUNCTION; ENTEROBACTER CLOACAE; METHANOTROPHS; MICROBIAL POPULATIONS; NITROSOMONAS; PHYSIOLOGICAL FUNCTIONS; PROTEOBACTERIA; RUMEN FLUIDS; SPECIFIC PRIMERS;

BACTERIA;

AMMONIA; METHANE;

BACTERIUM; DETECTION METHOD;

ACTINOBACILLUS MINOR; ARTICLE; BACTERIUM DETECTION; CLONING; CLUSTER ANALYSIS; CONTROLLED STUDY; ENTEROBACTER CLOACAE; EPITHELIUM; GRAM NEGATIVE BACTERIUM; METHANOTROPHIC BACTERIUM; MICROBIAL POPULATION DYNAMICS; NITROSOMONAS; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYSIOLOGY; POLYMERASE CHAIN REACTION; RUMINANT STOMACH; SUCCINIVIBRIO DEXTRINOSOLVENS; SURFACE PROPERTY;

ACTINOBACILLUS; ACTINOBACILLUS MINOR; BACTERIA (MICROORGANISMS); ENTEROBACTER; ENTEROBACTER CLOACAE; NEGIBACTERIA; NITROSOMONAS; NITROSOMONAS SP.; PROTEOBACTERIA; SUCCINIVIBRIO DEXTRINOSOLVENS;

EID: 0036040128     PISSN: 02668254     EISSN: None     Source Type: Journal    
DOI: 10.1046/j.1472-765X.2002.01172.x     Document Type: Article

References (23)

1. Molecular characterization of methanotrophic isolates from freshwater lake sediment
2. Prediction of the amount of methane produced by ruminants
3. Detection and classification of atmospheric methane oxidizing bacteria in soil
4. Compartmentation in the rumen
5. Confidence limits on phylogenies: An approach using the bootstrap
6. 18O-tracer evidence that hydroxylamine formation involves amonooxygenase
7. Evidence that particulate methane monooxygenase and ammonia monooxygenase may be evolutionarily related
8. Methane oxidation by Nitrosomonas europaea
9. Nitrous oxide production and methane oxidation by different ammonia-oxidizing bacteria
10. Methane oxidation in the rumen
11. Occurrence of virulence-associated properties in Enterobacter cloacae
12. 16S/23S rRNA sequencing
13. Cultivation-independent techniques for studying methanotroph ecology
14. Pacific Northwest marine sediments contain ammonia-oxidizing bacteria in the beta subdivision of the Proteobacteria
15. Other trace gases and atmospheric chemistry
16. The neighbor-joining method: A new method for reconstructing phylogenetic trees
17. Phylogenetic analysis and in situ identification of bacteria in activated sludge
18. Analysis of beta-subgroup proteobacterial ammonia oxidizer populations in soil by denaturing gradient gel electrophoresis analysis and hierarchical phylogenetic probing
19. Morphology and physiology of Methanomonas methanooxidans
20. CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
21. An independent microbial flora of the epithelium and its role in the ecomicrobiology of the rumen
22. Methanotroph diversity in landfill soil: Isolation of novel type I and type II methanotrophs whose presence was suggested by culture-independent 16S ribosomal DNA analysis
23. 4