Comparative analysis of the plant mRNA-destabilizing element, DST, in mammalian and tobacco cells

Plant Molecular Biology

Volumn 49, Issue 2, 2002, Pages 215-223

  Feldbrugge M ^a,b   Arizti, P ^c,d   Sullivan, M L ^a,e   Zamore, P D ^f   Belasco, J G ^c   Green, P J ^a,g  

^a MICHIGAN STATE UNIVERSITY   (United States)

^b MAX PLANCK INSTITUTE FOR TERRESTRIAL MICROBIOLOGY   (Germany)

^c NEW YORK UNIVERSITY SCHOOL OF MEDICINE   (United States)

^d HARVARD INSTITUTES OF MEDICINE   (United States)

^e U S DAIRY FORAGE RESEARCH CENTER   (United States)

^f UNIVERSITY OF MASSACHUSETTS   (United States)

^g Michigan State University   (United States)

Author keywords

DST; Instability sequence; mRNA decay; mRNA turnover; Post transcriptional control; RNA binding protein

Indexed keywords

CELL CULTURE; PLANTS (BOTANY); RNA;

FIBROBLASTS;

MOLECULAR BIOLOGY;

ANIMALIA; ARABIDOPSIS; EMBRYOPHYTA; GLYCINE MAX; MAMMALIA; NICOTIANA TABACUM;

MESSENGER RNA; POLYADENYLIC ACID;

ANIMAL; ARABIDOPSIS; ARTICLE; CELL STRAIN 3T3; COMPARATIVE STUDY; CYTOLOGY; GENETICS; METABOLISM; MOLECULAR GENETICS; MOUSE; NUCLEOTIDE SEQUENCE; PHYSIOLOGY; PLANT; REGULATORY SEQUENCE; RNA STABILITY; SOYBEAN; TOBACCO;

3T3 CELLS; ANIMALS; ARABIDOPSIS; BASE SEQUENCE; MICE; MOLECULAR SEQUENCE DATA; PLANTS; POLY A; REGULATORY SEQUENCES, NUCLEIC ACID; RNA STABILITY; RNA, MESSENGER; SOYBEANS; TOBACCO;

EID: 0036010860     PISSN: 01674412     EISSN: None     Source Type: Journal    
DOI: 10.1023/A:1014936824187     Document Type: Article

References (48)

1. Control of mRNA stability in higher plants
2. Degradation of mRNA in eukaryotes
3. Mechanisms and control of mRNA turnover in Saccharomyces cerevisiae
4. Feedback inhibition of macrophage tumor necrosis factor-α production by tristetraprolin
5. AU-rich elements: Characterization and importance in mRNA degradation
6. Direct evidence for rapid degradation of Bacillus thuringiensis toxin mRNA as a cause of poor expression in plants
7. Overexpression of HuR, a nuclear-cytoplasmic shuttling protein, increases the in vivo stability of ARE-containing mRNAs
8. Functional analysis of a light-responsive plant bZIP transcriptional regulator
9. ELAV proteins stabilize deadenylated intermediates in a novel in vitro mRNA deadenylation/degradation system
10. Characterization of the auxin-inducible SAUR-AC1 gene for use as a molecular genetic tool in Arabidopsis
11. Multiple regions of the Arabidopsis SAUR-AC1 gene control transcript abundance: The 3′ untranslated region functions as an mRNA instability determinant
12. Stimulation of 3T3 cells induces transcription of the c-fos proto-oncogene
13. Control of the decay of labile protooncogene and cytokine mRNAs
14. The SV40 enhancer is composed of multiple functional elements that can compensate for one another
15. Interrelationships of the pathways of mRNA decay and translation in eukaryotic cells
16. Autoradiography using storage phosphor technology
17. Sequences in the pea rbcS-3A gene have homology to constitutive mammalian enhancers but function as negative regulatory elements
18. AUUUA is not sufficient to promote poly(A) shortening and degradation of an mRNA: The functional sequence within AU-rich elements may be UUAUUUA(U/A)(U/A)
19. Evidence that tristetraprolin binds to AU-rich elements and promotes the deadenylation and destabilization of tumor necrosis factor alpha mRNA
20. GT-1 binding site confers light responsive expression in transgenic tobacco
21. Activation of the transforming potential of the human fos proto-oncogene requires message stabilization and results in increased amounts of partially modified fos protein
22. The product of the yeast UPF1 gene is required for rapid turnover of mRNAs containing a premature translational termination codon
23. Unraveling a cytoplasmic role for hnRNP D in the in vivo mRNA destabilization directed by the AU-rich element
24. The Elav-like proteins bind to AU-rich elements and to the poly(A) tail of mRNA
25. Rapid redistribution of auxin-regulated RNAs during gravitropism
26. Transcription, organization, and sequence of an auxin-regulated gene cluster in soybean
27. Removal of a 67-base-pair sequence in the noncoding region of protooncogene fos converts it to a transforming gene
28. Identification of HuR as a protein implicated in AUUUA-mediated mRNA decay
29. Tobacco BY-2 cell line as the 'HeLa' cell in the cell biology of higer plants
30. DST sequences, highly conserved among plant SAUR genes, target reporter transcripts for rapid decay in tobacco
31. The effect of sequences with high AU content on mRNA stability in tobacco
32. Regulation of mRNA turnover in eukaryotic cells
33. RNA stabilization by the AU-rich element binding protein, HuR, an ELAV protein
34. The inner core of the serum response element mediates both the rapid induction and subsequent repression of c-fos transcription following serum stimulation
35. mRNA stability in mammalian cells
36. Deregulated c-fos expression interferes with normal bone development in transgenic mice
37. A conserved AU sequence from the 3′ untranslated region of GM-CSF mRNA mediates selective mRNA degradation
38. The c-fos transcript is targeted for rapid decay by two distinct mRNA degradation pathways
39. Two distinct destabilizing elements in the c-fos message trigger deadenylation as a first step in rapid mRNA decay
40. Mutational analysis of the DST element in tobacco cells and transgenic plants: Identification of residues critical for mRNA instability
41. A mutated human homologue to yeast Upf1 protein has a dominant-negative effect on the decay of nonsense-containing mRNAs in mammalian cells
42. Premature nonsense codons decrease the stability of phytohemagglutinin mRNA in a position-dependent manner
43. Removal of poly(A) and consequent degradation of c-fos mRNA facilitated by 3′ AU-rich sequences
44. A broader role for AU-rich element-mediated mRNA turnover revealed by a new transcriptional pulse strategy
45. The Pumilio protein binds RNA through a conserved domain that defines a new class of RNA-binding proteins
46. The Pumilio-RNA interaction: A single RNA-binding domain monomer recognizes a bipartite target sequence
47. Purification, characterization, and cDNA cloning of an AU-rich element RNA-binding protein, AUF1
48. The nonamer UUAUUUAUU is the key AU-rich sequence motif that mediates mRNA degradation