Mimic of Photocycle by a Protein Folding Reaction in Photoactive Yellow Protein

Journal of Biological Chemistry

Volumn 276, Issue 48, 2001, Pages 44481-44487

  Lee, Byoung Chul ^a,b   Croonquist, Paula A ^a   Hoff, Wouter D ^a  

^a UNIVERSITY OF CHICAGO   (United States)

^b UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CHROMOPHORES; ISOMERIZATION; PH EFFECTS;

PHOTOSENSORY SIGNAL TRANSDUCTION;

PROTEINS;

PARA COUMARIC ACID; PHOTOACTIVE YELLOW PROTEIN; RHODOPSIN; BACTERIAL PROTEIN; PHOTOACTIVE YELLOW PROTEIN, BACTERIA;

ACIDIFICATION; ARTICLE; CHROMATOPHORE; ISOMERISM; MOLECULAR MIMICRY; PH; PHOTOCHEMISTRY; PRIORITY JOURNAL; PROTEIN DENATURATION; PROTEIN FOLDING; SIGNAL TRANSDUCTION; STEADY STATE; CHEMICAL MODEL; CHEMISTRY; ESCHERICHIA COLI; KINETICS; LIGHT; METABOLISM; SPECTROFLUOROMETRY; STEREOISOMERISM; TEMPERATURE; TIME;

BACTERIAL PROTEINS; ESCHERICHIA COLI; HYDROGEN-ION CONCENTRATION; KINETICS; LIGHT; MODELS, CHEMICAL; PROTEIN DENATURATION; PROTEIN FOLDING; SIGNAL TRANSDUCTION; SPECTROMETRY, FLUORESCENCE; STEREOISOMERISM; SUPPORT, NON-U.S. GOV'T; SUPPORT, U.S. GOV'T, P.H.S.; TEMPERATURE; TIME FACTORS;

EID: 0035977041     PISSN: 00219258     EISSN: None     Source Type: Journal    
DOI: 10.1074/jbc.M104362200     Document Type: Article

References (41)

1. Meyer, T. E., Yakali, E., Cusanovich, M. A., and Tollin, G. (1987) Biochemistry 26, 418-423
2. Kort, R., Hoff, W. D., Van West, M., Kroon, A. R., Hoffer, S., Vlieg, K., Crielaard, W., and Hellingwerf, K. J. (1996) EMBO J. 15, 3209-3218
3. Sprenger, W. W., Hoff, W. D., Armitage, J. P., and Hellingwerf, K. J. (1994) J. Bacteriol. 175, 3096-3104
4. Hoff, W. D., Düx, P., Hård, K., Devreese, B., Nugteren-Roodzant, I. M., Crielaard, W., Boelens, R., Van Beeumen, J., and Hellingwerf, K. J. (1994) Biochemistry 33, 13959-13962
5. Baca, M., Borgstahl, G. E. O., Boissinot, M., Burke, P. M., Williams, D. R., Slater, K. A., and Getzoff, E. D. (1994) Biochemistry 33, 14369-14377
6. Kort, R., Vonk, H., Xu, X., Hoff, W. D., Crielaard, W., and Hellingwerf, K. J. (1996) FEBS Lett. 382, 73-78
7. Perman, B., Srajer, V., Ren, Z., Teng, T., Pradervand, C., Ursby, T., Schotte, F., Wulff, M., Kort, R., Hellingwerf, K. J., and Moffat, K. (1998) Science 279, 1946-1950
8. Genick, U. K., Soltis, S. M., Kuhn, P., Canestrelli, I. L., and Getzoff, E. D. (1998) Nature 392, 206-209
9. Xie, A., Hoff, W. D., Kroon, A. R., and Hellingwerf, K. J. (1996) Biochemistry 35, 14671-14678
10. Imamoto, Y., Mihara, K., Hisatomi, O., Kataoka, M., Tokunaga, F., Bojkova, N., and Yoshihara, K. (1997) J. Biol. Chem. 272, 12905-12908
11. Genick, U. K., Borgstahl, G. E., Ng, K., Ren, Z., Pradervand, C., Burke, P. M., Srajer, V., Teng, T. Y., Schildkamp, W., McRee, D. E., Moffat, K., and Getzoff, E. D. (1997) Science 275, 1471-1475
12. Xie, A., Kelemen, L., Hendriks, J., White, B. J., Hellingwerf, K. J., and Hoff, W. D. (2001) Biochemistry 40, 1510-1517
13. Hoff, W. D., Van Stokkum, I. H. M., Van Ramesdonk, H. J., Van Brederode, M. E., Brouwer, A. M., Fitch, J. C., Meyer, T. E., Van Grondelle, R., and Hellingwerf, K. J. (1994) Biophys. J. 67, 1691-1705
14. Hoff, W. D., Jung, K., and Spudich, J. L. (1997) Annu. Rev. Biophys. Biomol. Struct. 26, 223-258
15. Van Brederode, M. E., Hoff, W. D., Van Stokkum, I. H. M., Groot, M. L., and Hellingwerf, K. J. (1996) Biophys. J. 71, 365-380
16. Rubinstenn, G., Vuister, G. W., Mulder, F. A. A., Düx, P. E., Boelens, R., Hellingwerf, K. J., and Kaptein, R. (1998) Nat. Struct. Biol. 5, 568-570
17. Hoff, W. D., Xie, A., Van Stokkum, I. H. M., Tang, X.-J., Gural, J., Kroon, A. R., and Hellingwerf, K. J. (1999) Biochemistry 38, 1009-1017
18. Craven, C. J., Derix, N. M., Hendriks, J., Boelens, R., Hellingwerf, K. J., and Kaptein, R. (2000) Biochemistry 39, 14392-14399
19. Lee, B.-C., Pandit, A., Croonquist, P. A., and Hoff, W. D. (2001) Proc. Natl. Acad. Sci. U. S. A. 98, 9062-9067
20. Lee, B.-C., Croonquist, P. A., Sosnick, T. R., and Hoff, W. D. (2001) J. Biol. Chem. 276, 20821-20823
21. Ohishi, S., Shimizu, N., Mihara, K., Imamoto, Y., Kataoka, M. (2001) Biochemistry 40, 2854-2859
22. Tanford, C. (1968) Adv. Protein Chem. 23, 121-282
23. Tan, Y.-J., Oliveberg, M., and Fersht, A. R. (1996) J. Mol. Biol. 264, 377-389
24. Meyer, T. E. (1985) Biochim. Biophys. Acta 806, 175-183
25. Hoff, W. D., Van Stokkum, I. H. M., Gural, J., and Hellingwerf, K. J. (1997) Biochim. Biophys. Acta 1322, 151-162
26. Jackson, S. E., Fersht, A. R. (1991) Biochemistry 30, 10436-10443
27. Meyer, T. E., Tollin, G., Causgrove, T. P., Cheng, P., and Blankenship, R. E. (1991) Biophys. J. 59, 988-991
28. Baker, D., Sohl, J. L., and Agard, D. A. (1992) Nature 356, 263-265
29. Baker, D., and Agard, D. A. (1994) Biochemistry 33, 7505-7509
30. Genick, U. K., Devanathan, S., Meyer, T. E., Canestrelli, I. L., Williams, E., Cusanovich, M. A., Tollin, G., and Getzoff, E. D. (1997) Biochemistry 36, 8-14
31. Devanathan, S., Genick, U. K., Canestrelli, I. L., Meyer, T. E., Cusanovich, M. A., Getzoff, E. D., and Tollin, G. (1998) Biochemistry 37, 11563-11568
32. Devanathan, S., Brudler, R., Hessling, B., Woo, T. T., Gerwert, K., Getzoff, E. D., Cusanovich, M. A., and Tollin, G. (1999) Biochemistry 38, 13766-13772
33. Demchuk, E., Genick, U. K., Woo, T. T., Getzoff, E. D., and Bashford, D. (2000) Biochemistry 39, 1100-1113
34. Brudler, R., Meyer, T. E., Genick, U. K., Devanathan, S., Woo, T. T., Millar, D. P., Gerwert, K., Cusanovich, M. A., Tollin, G., and Getzoff, E. D. (2000) Biochemistry 39, 13478-13486
35. Borgstahl, G. E. O., Williams, D. R., Getzoff, E. D. (1995) Biochemistry 34, 6278-6287
36. Tanford, C. (1970) Adv. Protein Chem. 24, 1-95
37. Oliveberg, M., and Fersht, A. R. (1996) Biochemistry 35, 2726-2737
38. Parker, M. J., and Marqusee, S. (1999) J. Mol. Biol. 293, 1195-1210
39. Parker, M. J., Spencer, J., and Clarke, A. R. (1995) J. Mol. Biol. 253, 771-786
40. Otzen, D. E., Kristensen, O., Proctor, M., and Oliveberg, M. (1999) Biochemistry 38, 6499-6511
41. Richter, H.-T., Needleman, R., Kandori, H., Maeda, A., and Lanyi, J. K. (1996) Biochemistry 35, 15461-15466