Active site residues of glutamate racemase

Biochemistry

Volumn 40, Issue 21, 2001, Pages 6199-6204

  Glavas, Suzana ^a   Tanner, Martin E ^a  

^a UNIVERSITY OF BRITISH COLUMBIA   (Canada)

Author keywords

[No Author keywords available]

Indexed keywords

DEPROTONATION;

BACTERIA; BIOSYNTHESIS; CATALYSIS; ENZYMES; MUTAGENESIS; STRUCTURAL ANALYSIS; SUBSTRATES;

BIOCHEMISTRY;

BACTERIAL ENZYME; GLUTAMIC ACID; ISOENZYME; MUTANT PROTEIN; RACEMASE;

ARTICLE; CHEMICAL REACTION; ENZYME ACTIVE SITE; ENZYME ACTIVITY; ENZYME KINETICS; LACTOBACILLUS FERMENTUM; MUTAGENESIS; NONHUMAN; NUCLEOTIDE SEQUENCE; PLASMID; PRIORITY JOURNAL;

AMINO ACID ISOMERASES; AMINO ACID SEQUENCE; ASPARAGINE; ASPARTIC ACID; BACTERIAL PROTEINS; BINDING SITES; DEUTERIUM; GLUTAMIC ACID; GLUTAMINE; HISTIDINE; ISOENZYMES; KINETICS; MOLECULAR SEQUENCE DATA; MUTAGENESIS, SITE-DIRECTED; RECOMBINANT PROTEINS; SEQUENCE ALIGNMENT;

BACTERIA (MICROORGANISMS); LACTOBACILLUS FERMENTUM;

EID: 0035967535     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi002703z     Document Type: Article

References (38)

1. Tanner, M. E., and Kenyon, G. L. (1998) in Comprehensive Biological Catalysis (Sinnott, M., Ed.) Vol. II, pp 7-41, Academic Press, San Diego.
2. van Heijenoort, J. (1996) in Escherichia coli and Salmonella (Neidhardt, F. C, Curtis, R., III, Ingraham, J. L., Lin, E. C. C., Low, K. B., Magasanik, B., Resnikoff, W. S., Riley, M., Schaechter, M., and Umbarger, H. E., Eds.) pp 1025-1034, American Society for Microbiology, Washington, DC.
3. Wong, K. K., and Pompliano, D. L. (1998) Adv. Exp. Med. Biol 456, 197-217.
4. Gale, E. F., Cundliffe, E., Reynolds, P. E., Richmond, M. H., and Waring, M. J. (1981) The Molecular Basis of Antibiotic Action, 2nd ed., Wiley and Sons, London.
5. Fisher, L. M., Belasco, J. G., Bruice, T. W., Albery, W. J., and Knowles, J. R. (1986) in Mechanisms of Enzymatic Reactions: Stereochemistry (Frey, P. A., Ed.) pp 205-216, Elsevier Science Publishing Co., Inc., New York.
6. Albery, W. J., and Knowles, J. R. (1986) Biochemistry 25, 2572-2577.
7. Rudnick, G., and Abeles, R. H. (1975) Biochemistry 14, 4515-4522.
8. Cardinale, G. J., and Abeles, R. H. (1968) Biochemistry 7, 3970-3978.
9. Yamauchi, T., Choi, S.-Y., Okada, H., Yohda, M., Kumagai, H., Esaki, N., and Soda, K. (1992) J. Biol. Chem. 267, 18361-18364.
10. Koo, C. W., Sutherland, A., Vederas, J. C., and Blanchard, J. S. (2000) J. Am. Chem. Soc. 122, 6122-6123.
11. Koo, C. W., and Blanchard, J. S. (1999) Biochemistry 38, 4416-4422.
12. Cirilli, M., Zheng, R., Scapin, G., and Blanchard, J. S. (1998) Biochemistry 37, 16452-16458.
13. Higgins, W., Tardif, C., Richaud, C., Krivanek, M. A., and Cardin, A. (1989) Eur. J. Biochem. 186, 137-143.
14. Wiseman, J. S., and Nichols, J. S. (1984) J. Biol. Chem. 259, 8907-8914.
15. Gallo, K. A., Tanner, M. E., and Knowles, J. R. (1993) Biochemistry 32, 3991-3997.
16. Choi, S.-Y., Esaki, N., Yoshimura, T., and Soda, K. (1992) J. Biochem. 112, 139-142.
17. Tanner, M. E., and Miao, S. (1994) Tetrahedron Lett. 35, 4073-4076.
18. Tanner, M. E., Gallo, K. A., and Knowles, J. R. (1993) Biochemistry 32, 3998-4006.
19. Doublet, P., van Heijenoort, J., and Mengin-Lecreulx, D. (1996) Microb. Drug Resist. 2, 43-49.
20. Ho, H.-T., Falk, P. J., Ervin, K. M., Krishnan, B. S., Discotto, L. F., Dougherty, T. J., and Pucci, M. J. (1995) Biochemistry 34, 2464-2470.
21. Glavas, S., and Tanner, M. E. (1999) Biochemistry 38, 4106-4113.
22. Hwang, K. Y., Cho, C.-S., Kim, S. S., Sung, H.-C., Yu, Y. G., and Cho, Y. (1999) Nat. Struct. Biol. 6, 422-426.
23. Jones, D. H., and Winistorfer, S. C. (1992) BioTechniques 12, 528-535.
24. Gallo, K. A., and Knowles, J. R. (1993) Biochemistry 32, 3981-3990.
25. Cleland, W. W. (1963) Biochim. Biophys. Acta 67, 104-137.
26. Fisher, L. M., Albery, W. J., and Knowles, J. R. (1986) Biochemistry 25, 2529-2537.
27. Rios, A., and Richard, J. P. (1997) J. Am. Chem. Soc. 119, 8375-8376.
28. Rios, A., Amyes, T. L., and Richard, J. P. (2000) J. Am. Chem. Soc. 122, 9373-9385.
29. Gerlt, J. A., and Gassman, P. G. (1993) Biochemistry 32, 11943-11952.
30. Cleland, W. W., and Kreevoy, M. M. (1994) Science 264, 1887-1890.
31. Guthrie, J. P., and Kluger, R. (1993) J. Am. Chem. Soc. 115, 11569-11572.
32. Liu, Y., Thoden, J. B., Kim, J., Berger, E., Gulick, A. M., Ruzicka, F. J., Holden, H. M., and Frey, P. A. (1997) Biochemistry 36, 10675-10684.
33. Whitman, C. P., Hegeman, G. D., Cleland, W. W., and Kenyon, G. L. (1985) Biochemistry 24, 3936-3942.
34. Kallarakal, A. T., Mitra, B., Kozarich, J. W., Gerlt, J. A., Clifton, J. G., Petsko, G. A., and Kenyon, G. L. (1995) Biochemistry 34, 2788-2797.
35. Sun, S., and Toney, M. D. (1999) Biochemistry 38, 4058-4065.
36. Gerlt, J. A., and Gassman, P. G. (1993) J. Am. Chem. Soc. 115, 11552-11568.
37. Mitra, B., Kallarakal, A. T., Kozarich, J. W., Gerlt, J. A., Clifton, J. G., Petsko, G. A., and Kenyon, G. L. (1995) Biochemistry 34, 2777-2787.
38. Kim, S. S., Choi, I.-G., Kim, S.-H., and Yu, Y. G. (1999) Extremophiles 3, 175-183.