Escherichia coli ykfE ORFan Gene Encodes a Potent Inhibitor of C-type Lysozyme

Journal of Biological Chemistry

Volumn 276, Issue 21, 2001, Pages 18437-18441

  Monchois, Vincent ^a   Abergel, Chantal ^a   Sturgis, James ^b   Jeudy, Sandra ^a   Claverie, Jean Michel ^a  

^a CNRS Aix Marseille University   (France)

^b UPR 9027   (France)

Author keywords

[No Author keywords available]

Indexed keywords

CLONING; CRYSTALLIZATION; ENZYME INHIBITION; ESCHERICHIA COLI; FLUORESCENCE; MOLECULAR STRUCTURE; PHYSIOLOGY;

GENE EXPRESSION;

BIOCHEMISTRY;

DIMER; ENZYME INHIBITOR; GENE PRODUCT; LYSOZYME; CARRIER PROTEIN; ESCHERICHIA COLI PROTEIN; YKFE PROTEIN, E COLI;

ARTICLE; BACTERIAL GENE; BINDING AFFINITY; CRYSTALLIZATION; ESCHERICHIA COLI; FLUORESCENCE; GENE EXPRESSION; GENE STRUCTURE; GENOME; IVY GENE; MOLECULAR CLONING; NONHUMAN; NUCLEOTIDE SEQUENCE; OPEN READING FRAME; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN PROTEIN INTERACTION; PROTEIN PURIFICATION; SEQUENCE HOMOLOGY; YKFE GENE; AMINO ACID SEQUENCE; DRUG ANTAGONISM; GENETICS; MOLECULAR GENETICS;

BACTERIA (MICROORGANISMS); ESCHERICHIA COLI; EUKARYOTA; HEDERA; NEGIBACTERIA; OTHER SEQUENCES; PROKARYOTA; VERTEBRATA;

AMINO ACID SEQUENCE; CARRIER PROTEINS; CLONING, MOLECULAR; ENZYME INHIBITORS; ESCHERICHIA COLI; ESCHERICHIA COLI PROTEINS; GENES, BACTERIAL; MOLECULAR SEQUENCE DATA; MURAMIDASE; OPEN READING FRAMES;

EID: 0035947615     PISSN: 00219258     EISSN: None     Source Type: Journal    
DOI: 10.1074/jbc.M010297200     Document Type: Article

References (42)

1. Stover, C. K., Pham, X. Q., Erwin, A. L., Mizoguchi, S. D., Warrener, P., Hickey, M. J., Brinkman, F. S., Hufnagle, W. O., Kowalik, D. J., Lagrou, M., Garber, R. L., Goltry, L., Tolentino, E., Westbrock-Wadman, S., Yuan, Y., Brody, L. L., Coulter, S. N., Folger, K. R., Kas, A., Larbig, K., Lim, R., Smith, K., Spencer, D., Wong, G. K., Wu, Z., and Paulsen, I. T. (2000) Nature 406, 959-964
2. Fischer, D., and Eisenberg, D. (1999) Bioinformatics 15, 759-762
3. Alimi, J. P., Poirot, O., Lopez, F., and Claverie, J. M. (2000) Genome Res. 10, 959-966
4. Blattner, F. R., Plunkett, G., Bloch, C. A., Perna, N. T., Burland, V., Riley, M., Collado-Vides, J., Glasner, J. D., Rode, C. K., Mayhew, G. F., et al. (1997) Science 277, 1453-1474
5. Wasinger, V. C., and Humphery-Smith, I. (1998) FEMS Microbiol. Lett. 169, 375-382
6. Pasquali, C., Frutiger, S., Wilkins, M. R., Hughes, G. J., Appel, R. D., Bairoch, A., Schaller, D., Sanchez, J. C., and Hochstrasser, D. F. (1996) Electrophoresis 17, 547-555
7. Abergel, C., Monchois, V., Chenivesse, S., Jeudy, S., and Claverie, J. M. (2000) Acta Crystallogr. 56, 1694-1695
8. Gill, S. C., and von Hippel P. H. (1989) Anal. Biochem. 182, 319-326
9. Charlemagne, D., and Jollès, P. (1970) C. R. Acad. Sci. (Paris) 2721-2723
10. Morrison, J. F. (1969) Biochim. Biophys. Acta 185, 269-286
11. Morrison, J. F., and Walsh, C. (1988) Adv. Enzymol. Relat. Areas Mol. Biol. 61, 201-301
12. Soumillion, P., Jespers, L., Vervoors, J., and Fastrez, J. (1995) Protein Eng. 8, 451-456
13. Hackman, R. H., and Golberg, M. (1964) Anal. Biochem. 8, 397-401
14. Wang, Y., Addess, K. J., Geer, L., Madej, T., Marchler-Bauer, A., Zimmerman, D., and Bryant, S. H. (2000) Nucleic Acids Res. 28, 243-245
15. Taylor, D. C., Cripps, A. W., and Clancy, R. L. (1992) J. Immunol. Methods 146, 55-61
16. Qasba, P. K., and Kumar, S. (1997) Crit. Rev. Biochem. Mol. Biol. 32, 255-306
17. Wilson, K. P., Malcom, B. A., and Matthews, B. W. (1992) J. Biol. Chem. 267, 10842-10849
18. Gemsa, D., Davis, S. D., and Wedgwood, R. J. (1996) Nature 210, 950-951
19. Selsted, M. E., and Martinez, R. J. (1978) Infect. Immun. 20, 782-791
20. Murakami, K., Lagarde, M., and Yuki, Y. (1998) Electrophoresis 19, 2521-2527
21. Hamosh, M. (1998) Biol. Neonate 74, 163-176
22. Peeters, T., and Vantrappen, G. (1975) Gut 16, 553-558
23. Jacquot, J., Hayem, A., and Galabert, C. (1992) Eur. Respir. J. 5, 343-358
24. Lim, D. J., Liu, Y. S., and Birck, H. (1976) Ann. Otol. Rhinol. Laryngol. 85, 50-60
25. McNabb, P. C., and Tomasi, T. B. (1981) Annu. Rev. Microbiol. 35, 477-496
26. Cohen, M. S., Black, J. R., Proctor, R. A., and Sparling, P. F. (1984) Scand. J. Urol. Nephrol. Suppl. 86, 13-22
27. Tachibana, M., Morioka, H., Machino, M., and Mizukoshi, O. (1986) Auris Nasus Larynx 13, 97-99
28. Hanamure, Y., and Lim, D. J. (1986) Am. J. Otolaryngol. 7, 410-425
29. McClellan, K. A. (1997) Surv. Ophthalmol. 42, 233-246
30. Schenkels, L. C., Veerman, E. C., and Nieuw Amerongen, A. V. (1995) Crit. Rev. Oral Biol. Med. 6, 161-175
31. Cole, A. M., Dewan, P., and Ganz, T. (1999) Infect. Immun. 67, 3267-3275
32. Kondo, L. R., Hanna, L., and Keshishyan, H. (1973) Proc. Soc. Exp. Biol. Med. 142, 131-132
33. Walker, W. A. (1979) Ciba Found. Symp. 70, 201-219
34. Ved'mina, E. A., Pasternak, N. A., Shenderovich, V. A., Zhuravleva, T. P., and Andrusenko, I. T. (1979) Antibiot. Khimioter. 24, 746-750
35. Hancock, R. E., and Scott, M. G. (2000) Proc. Natl. Acad. Sci. U. S. A. 97, 8856-8861
36. Vollmer, W., and Tomasz, A. (2000) J. Biol. Chem. 275, 20496-20501
37. Bukharin, O. V. (1994) Zh. Mikrobiol. Epidemiol. Immunobiol. 1, (Suppl.) 4-13
38. Bondarenko, V. M., Petrovskaia, V. G., and Iablochkov, A. L. (1994) Zh. Mikrobiol. Epidemiol. Immunobiol. 1, (Suppl.) 22-28
39. Nemtseva, N. V. (1997) Zh. Mikrobiol. Epidemiol. Immunobiol. 4, 123-126
40. Lentsner, A. A., Lentsner, Kh. P., and Toom, M. A. (1975) Zh. Mikrobiol. Epidemiol. Immunobiol. 8, 77-81
41. Bukharin, O. V., and Deriabin, D. G. (1989) Zh. Mikrobiol. Epidemiol. Immunobiol. 11, 16-19
42. Pearson, W. R. (2000) Methods Mol. Biol. 132, 185-219