메뉴 건너뛰기




Volumn 269, Issue 1-2, 2001, Pages 195-204

Identification of putative exported/secreted proteins in prokaryotic proteomes

Author keywords

Exported proteins; Genomics; Neural network; Signal peptide

Indexed keywords

AMINO ACID; ARCHAEAL DNA; BACTERIAL PROTEIN; CYTOPLASM PROTEIN; PROTEOME;

EID: 0035897583     PISSN: 03781119     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0378-1119(01)00436-X     Document Type: Article
Times cited : (40)

References (29)
  • 1
    • 0000363796 scopus 로고    scopus 로고
    • Genetics of protein secretion
    • M. Braunstein J.T. Belisle Genetics of protein secretion G.F. Hatfull W.R. Jacobs Molecular Genetics of Mycobacteria 2000 ASM press Washington, DC 203 220
    • (2000) , pp. 203-220
    • Braunstein, M.1    Belisle, J.T.2
  • 2
    • 0031588694 scopus 로고    scopus 로고
    • Relation between amino acid composition and cellular location of proteins
    • J. Cedano P. Aloy J.A. Peres-Pons E. Querol Relation between amino acid composition and cellular location of proteins J. Mol. Biol. 266 1997 594 600
    • (1997) J. Mol. Biol. , vol.266 , pp. 594-600
    • Cedano, J.1    Aloy, P.2    Peres-Pons, J.A.3    Querol, E.4
  • 3
    • 0032508046 scopus 로고    scopus 로고
    • Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence
    • S.T. Cole Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence Nature 393 1998 537 544
    • (1998) Nature , vol.393 , pp. 537-544
    • Cole, S.T.1
  • 5
    • 0033008601 scopus 로고    scopus 로고
    • Protein targeting to the bacterial cytoplasmic membrane
    • P. Fekkes A.J. Driessen Protein targeting to the bacterial cytoplasmic membrane Microbiol. Mol. Biol. Rev. 63 1999 161 173
    • (1999) Microbiol. Mol. Biol. Rev. , vol.63 , pp. 161-173
    • Fekkes, P.1    Driessen, A.J.2
  • 6
    • 0031470826 scopus 로고    scopus 로고
    • Genomic sequence of a Lyme disease sphirochaete, Borrelia burghorferi
    • C.M. Fraser Genomic sequence of a Lyme disease sphirochaete, Borrelia burghorferi Nature 390 1997 580 586
    • (1997) Nature , vol.390 , pp. 580-586
    • Fraser, C.M.1
  • 7
    • 0034059725 scopus 로고    scopus 로고
    • Identification of secreted proteins of Mycobacterium tuberculosis by a bioinformatics approach
    • M. Gomez S. Johnson M.L. Gennaro Identification of secreted proteins of Mycobacterium tuberculosis by a bioinformatics approach Infect. Immun. 68 2000 2323 2327
    • (2000) Infect. Immun. , vol.68 , pp. 2323-2327
    • Gomez, M.1    Johnson, S.2    Gennaro, M.L.3
  • 10
    • 0023681547 scopus 로고
    • Signal and membrane anchor function overlap in the type II membrane protein IγCAT
    • J. Lipp B. Dobberstein Signal and membrane anchor function overlap in the type II membrane protein IγCAT J. Cell Biol. 106 1988 1813 1820
    • (1988) J. Cell Biol. , vol.106 , pp. 1813-1820
    • Lipp, J.1    Dobberstein, B.2
  • 11
    • 0016772212 scopus 로고
    • Comparison of the predicted and observed secondary structure of T4 phage lysozyme
    • B.W. Mathews Comparison of the predicted and observed secondary structure of T4 phage lysozyme Biochimica Biophysica Acta 405 1975 442 451
    • (1975) Biochimica Biophysica Acta , vol.405 , pp. 442-451
    • Mathews, B.W.1
  • 13
    • 0028239038 scopus 로고
    • Discrimination of intracellular and extracellular proteins using amino acid composition and residue-pair frequencies
    • H. Nakashima K. Nishikawa Discrimination of intracellular and extracellular proteins using amino acid composition and residue-pair frequencies J. Mol. Biol. 238 1994 54 61
    • (1994) J. Mol. Biol. , vol.238 , pp. 54-61
    • Nakashima, H.1    Nishikawa, K.2
  • 14
    • 0030614959 scopus 로고    scopus 로고
    • Identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites
    • H. Nielsen J. Engelbrecht S. Brunak G. von Heijne Identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites Protein Eng. 10 1997 1 6
    • (1997) Protein Eng. , vol.10 , pp. 1-6
    • Nielsen, H.1    Engelbrecht, J.2    Brunak, S.3    von Heijne, G.4
  • 15
    • 0030982247 scopus 로고    scopus 로고
    • A molecular view of microbial diversity and the biosphere
    • N.R. Pace A molecular view of microbial diversity and the biosphere Science 726 1997 734 740
    • (1997) Science , vol.726 , pp. 734-740
    • Pace, N.R.1
  • 16
    • 85120127108 scopus 로고
    • D.B. Parker Learning logic. Technical Report TR-47 1985 Center for Computational Research in Economics and Management Science MIT, Cambridge, MA
    • (1985)
    • Parker, D.B.1
  • 17
    • 0020638192 scopus 로고
    • A putative signal peptidase recognition site and sequence in eukaryotic and prokaryotic signal peptides
    • D. Perlman H.O. Halvorson A putative signal peptidase recognition site and sequence in eukaryotic and prokaryotic signal peptides J. Mol. Biol. 167 1983 391 409
    • (1983) J. Mol. Biol. , vol.167 , pp. 391-409
    • Perlman, D.1    Halvorson, H.O.2
  • 18
    • 0038415649 scopus 로고    scopus 로고
    • Protein translocation in the three domains of life: variations on a theme
    • M. Pohlschroder W.A. Prinz E. Hartman J. Beckwith Protein translocation in the three domains of life: variations on a theme Cell 91 1997 563 566
    • (1997) Cell , vol.91 , pp. 563-566
    • Pohlschroder, M.1    Prinz, W.A.2    Hartman, E.3    Beckwith, J.4
  • 19
    • 0027450561 scopus 로고
    • The complete general secretory pathway in Gram-negative bacteria
    • A.P. Pugsley The complete general secretory pathway in Gram-negative bacteria Microbiol. Rev. 57 1993 50 108
    • (1993) Microbiol. Rev. , vol.57 , pp. 50-108
    • Pugsley, A.P.1
  • 20
    • 0032077533 scopus 로고    scopus 로고
    • Using neural networks for prediction of the subcellular location of proteins
    • A. Reinhardt T. Hubbard Using neural networks for prediction of the subcellular location of proteins Nucleic Acid Res. 26 1998 2230 2236
    • (1998) Nucleic Acid Res. , vol.26 , pp. 2230-2236
    • Reinhardt, A.1    Hubbard, T.2
  • 21
    • 0032817742 scopus 로고    scopus 로고
    • How many potentially secreted proteins are contained in a bacterial genome?
    • G. Schneider How many potentially secreted proteins are contained in a bacterial genome? Gene 237 1999 113 121
    • (1999) Gene , vol.237 , pp. 113-121
    • Schneider, G.1
  • 22
    • 0000383868 scopus 로고
    • Parallel networks that learn to pronounce English text
    • T.J. Sejnowski C.R. Rosenberg Parallel networks that learn to pronounce English text Complex Systems 1 1987 145 168
    • (1987) Complex Systems , vol.1 , pp. 145-168
    • Sejnowski, T.J.1    Rosenberg, C.R.2
  • 23
    • 0025762681 scopus 로고
    • Requirements for membrane insertion of signal-anchor type proteins
    • H. Stephen N. Flint B. Dobberstein Requirements for membrane insertion of signal-anchor type proteins J. Cell Biol. 113 1991 25 34
    • (1991) J. Cell Biol. , vol.113 , pp. 25-34
    • Stephen, H.1    Flint, N.2    Dobberstein, B.3
  • 24
    • 0020770479 scopus 로고
    • Patterns of amino acids near signal-sequence cleavage sites
    • G. von Heijne Patterns of amino acids near signal-sequence cleavage sites Eur. J. Biochem. 133 1983 17 21
    • (1983) Eur. J. Biochem. , vol.133 , pp. 17-21
    • von Heijne, G.1
  • 25
    • 0021856417 scopus 로고
    • Signal sequences. The limits of variation
    • G. von Heijne Signal sequences. The limits of variation J. Mol. Biol. 184 1985 99 105
    • (1985) J. Mol. Biol. , vol.184 , pp. 99-105
    • von Heijne, G.1
  • 26
    • 0023046815 scopus 로고
    • A new method for predicting signal sequence cleavage sites
    • G. von Heijne A new method for predicting signal sequence cleavage sites Nucleic Acid Res. 14 1986 4683 4690
    • (1986) Nucleic Acid Res. , vol.14 , pp. 4683-4690
    • von Heijne, G.1
  • 27
    • 85120132249 scopus 로고    scopus 로고
    • Widrow, B., 1963. Adaline and Madaline. IEEE-ICNN, 1, I-143-I-158.
  • 28
    • 85120132562 scopus 로고    scopus 로고
    • Widrow, B., Hoff, M., 1960. Adaptive switching and circuits. Institute of Radio Engineers WESCON Convention Record, part 4, 96–104
  • 29
    • 0025300402 scopus 로고
    • Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eukarya
    • C.R. Woese O. Kandler M.L. Wheelis Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eukarya Proc. Natl. Acad. Sci. USA 87 1990 4576 4579
    • (1990) Proc. Natl. Acad. Sci. USA , vol.87 , pp. 4576-4579
    • Woese, C.R.1    Kandler, O.2    Wheelis, M.L.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.