Prediction of DNA single-strand conformation polymorphism: Analysis by capillary electrophoresis and computerized DNA modeling

Nucleic Acids Research

Volumn 29, Issue 22, 2001, Pages 4643-4653

  Atha, Donald H ^a   Kasprzak, Wojciech ^b   O'Connell, Catherine D ^a   Shapiro, Bruce A ^c  

^a NATIONAL INSTITUTE OF STANDARDS AND TECHNOLOGY   (United States)

^b SAIC FREDERICK INC   (United States)

^c NATIONAL CANCER INSTITUTE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

DNA; ENZYME; PROTEIN P53; RNA;

ALGORITHM; ARTICLE; CAPILLARY ELECTROPHORESIS; COMPUTER PROGRAM; COMPUTER SYSTEM; CONFORMATIONAL TRANSITION; CONTROLLED STUDY; DIAGNOSTIC PROCEDURE; DNA HYBRIDIZATION; ELECTROPHORESIS; ENZYME DEGRADATION; GENE MUTATION; MOLECULAR MODEL; PREDICTION; PRIORITY JOURNAL; SINGLE STRAND CONFORMATION POLYMORPHISM; TEMPERATURE DEPENDENCE;

EID: 0035890850     PISSN: 03051048     EISSN: None     Source Type: Journal    
DOI: 10.1093/nar/29.22.4643     Document Type: Article

References (14)

1. Detection of p53 point mutations by single-strand conformation polymorphism (SSCP): Analysis by capillary electrophoresis
2. Development of standard reference materials for diagnosis of p53 mutations: Analysis by slab-gel-SSCP
3. Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure
4. On finding all suboptimal foldings of an RNA molecule
5. Improved predictions of secondary structures for RNA
6. STRUCTURELAB: A heterogenous bioinformatics system for RNA structure analysis
7. Stem Trace: An interactive visual tool for comparative RNA structure analysis
8. A unified view of polymer, dumbbell and oligonucleotide DNA nearest-neighbor thermodynamics
9. Capillary electrophoresis as a technique to analyze sequence-induced anomalously migrating DNA fragments
10. Identification of known p53 point mutations by capillary electrophoresis using unique mobility profiles in a blinded study
11. The computer simulation of RNA folding pathways using a genetic algorithm
12. Calculating nucleic acid secondary structure
13. RNA folding pathway functional intermediates: Their prediction and analysis
14. Secondary structure prediction of structure-specific sequence analysis of single-stranded DNA