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International Journal of Quantum Chemistry

Volumn 84, Issue 2, 2001, Pages 290-301

Protein matrix local fluctuations and substrate binding in HRPC: A proposed dynamic electrostatic sampling method

(4) Schay, Gusztav a Galantai, Rita a Laberge, Monique a Fidy, Judit a

a SEMMELWEIS UNIVERSITY (Hungary)

Author keywords

Electrostatics; Horseradish peroxidase; Poisson Boltzmann equation; UHBD

Indexed keywords

AROMATIC COMPOUNDS; CATALYSIS; CHEMICAL BONDS; CONFORMATIONS; CRYSTAL STRUCTURE; ELECTROSTATICS; ENZYMES; HYDROGEN PEROXIDE; MOLECULAR DYNAMICS; OXIDATION; POISSON EQUATION; X RAY ANALYSIS;

CONFORMATIONAL STRUCTURAL CHANGES; ELECTROSTATIC CONFORMATIONAL SAMPLING; HOLE BURNING; HORSERADISH PEROXIDASE; POISSON BOLTZMANN EQUATION; PROTEIN MATRIX;

PROTEINS;

EID: 0035812159 PISSN: 00207608 EISSN: None Source Type: Journal
DOI: 10.1002/qua.1334 Document Type: Conference Paper

Times cited : (6)

References (51)

1
- 0003525155
- Wiley Interscience: New York
- (1988) Proteins: A Theoretical Perspective of Dynamics, Structure, and Thermodynamics
- Brooks III, C.¹ Karplus, M.² Montgomery, J.A.³ Pettitt, B.⁴

2
- 0003516145
- Dahlem University Press
- (1999) In Simplicity and Complexity in Proteins and Nucleic Acids , pp. 193-198
- McCammon, J.A.¹

3
- 0026320866
- (1991) Science , vol.254 , pp. 1598
- Frauenfelder, H.¹ Sligar, S.G.² Wolynes, P.G.³

4
- 0018094892
- (1978) Science , vol.201 , pp. 1187
- Perutz, M.F.¹

5
- 0025283002
- (1990) Ann Rev Biophys Biophys Chem , vol.19 , pp. 301
- Sharp, K.A.¹ Honig, B.²

6
- 0025973269
- (1991) Proc Natl Acad Sci USA , vol.88 , pp. 2026
- Åqvist, J.¹ Luecke, H.² Quiocho, F.A.³ Warshel, A.⁴

7
- 0025891413
- (1991) Ann Rev Biophys Biophys Chem , vol.20 , pp. 267
- Warshel, A.¹ Åqvist, J.²

8
- 84962439356
- (1996) Q Rev Biophys , vol.29 , pp. 1
- Nakamura, H.¹

9
- 0033134360
- (1999) Phys Rev B , vol.59 , pp. 5958
- Kangas, E.¹ Tidor, B.²

10
- 0001192934
- (2000) J Chem Phys , vol.112 , pp. 9120
- Kangas, E.¹ Tidor, B.²

11
- 0029833446
- (1996) J Am Chem Soc , vol.118 , pp. 8452
- Simonson, T.¹ Brooks III, C.L.²

12
- 0030325168
- (1996) Faraday Discuss , vol.103 , pp. 71
- Simonson, T.¹ Perahia, D.²

13
- 0026353624
- (1991) Methods in Enzymol , vol.202 , pp. 473
- Davis, M.E.¹ Madura, J.D.² Sines, J.³ Luty, B.A.⁴ Allison, S.A.⁵ McCammon, J.A.⁶

14
- 0032568645
- (1998) Proc Natl Acad Sci USA , vol.95 , pp. 5942
- Wade, R.C.¹ Gabdoulline, R.R.² Luedemann, S.K.³ Lounnas, V.⁴

15
- 0002154654
- Everse, I.; Everse, K. E.; Grisham, M. B., Eds.; CRC Press: Boca Raton, FL
- (1991) Peroxidases in Chemistry and Biology , vol.2 , pp. 1
- Dunford, B.H.¹

16
- 0029017982
- (1995) Biochem Soc Trans , vol.23 , pp. 232
- Veitch, N.C.¹

17
- 0017794152
- (1978) Acta Chem Scand , vol.32 B , pp. 395
- Paul, K.G.¹ Ohlsson, P.I.²

18
- 0030780270
- (1997) Nature Struct Biol , vol.4 , pp. 1032
- Gajhede, M.¹ Schuller, D.J.² Henriksen, A.³ Smith, A.T.⁴ Poulos, T.L.⁵

19
- 0032474438
- (1998) Biochemistry , vol.37 , pp. 8054
- Henriksen, A.¹ Schuller, D.J.² Meno, K.³ Welinder, K.G.⁴ Smith, A.T.⁵ Gajhede, M.⁶

20
- 0033521007
- (1999) J Biol Chem , vol.274 , pp. 35005
- Henriksen, A.¹ Smith, A.T.² Gajhede, M.³

21
- 0037653186
- (1998) Biochim Biophys Acta , vol.1386 , pp. 255
- Köhler, M.¹ Friedrich, J.² Fidy, J.³

22
- 0031705781
- (1998) Biochim Biophys Acta , vol.1386 , pp. 289
- Fidy, J.¹ Balog, E.² Koehler, M.³

23
- 0030983160
- (1997) Biophys J , vol.73 , pp. 397
- Balog, E.¹ Kis-Petik, K.² Fidy, J.³ Köhler, M.⁴ Friedrich, J.⁵

24
- 0033803128
- (2000) Eur Biophys J , vol.29 , pp. 429
- Balog, E.¹ Galantai, R.² Koehler, M.³ Laberge, M.⁴ Fidy, J.⁵

25
- 0344339723
- (1999) Biophys J , vol.77 , pp. 3293
- Laberge, M.¹ Köhler, M.² Vanderkooi, J.³ Friedrich, J.⁴

26
- 0031709523
- (1998) Biochim Biophys Acta , vol.1386 , pp. 305
- Laberge, M.¹

27
- 0031406496
- (1997) Biochem , vol.36 , pp. 16049
- Elcock, A.H.¹ Huber, G.A.² McCammon, J.A.³

28
- 0033980201
- (2000) Biopolymers , vol.53 , pp. 265
- Wlodek, S.T.¹ Shen, T.² McCammon, J.A.³

29
- 84986512474
- (1983) J Comput Chem , vol.4 , pp. 187
- Brooks, B.R.¹ Bruccoleri, R.E.² Olafson, B.D.³ States, D.J.⁴ Swaminathan, S.⁵ Karplus, M.⁶

30
- 0029633152
- (1995) Comput Phys Commun , vol.91 , pp. 57
- Madura, J.D.¹ Briggs, J.M.² Wade, R.C.³ Davis, M.E.⁴ Luty, B.A.⁵ Ilin, A.⁶ Antosiewicz, J.⁷ Gilson, M.K.⁸ Bagheri, B.⁹ Scott, L.R.¹⁰ McCammon, J.A.¹¹

31
- 0017751668
- (1977) Eur J Biochem , vol.80 , pp. 319
- Bernstein, F.C.¹ Koetzle, T.F.² Williams, G.J.B.³ Meyer E.F., Jr.⁴ Brice, M.D.⁵ Rodgers, J.R.⁶ Kennard, O.⁷ Shimanouchi, T.⁸ Tasumi, M.⁹

32
- 0000058864
- (1986) J Phys Chem , vol.90 , pp. 250
- Fujiwara, M.¹ Tasumi, M.²

33
- 0001579138
- (1986) J Phys Chem , vol.90 , pp. 5646
- Fujiwara, M.¹ Tasumi, M.²

34
- 0003980438
- submitted
- Biochem
- Laberge, M.¹ Osvath, Sz.² Fidy, J.³

35
- 0000473603
- (1999) Phys Chem A , vol.103 , pp. 9290
- Antes, L.¹ Thiel, W.J.²

36
- 33748545144
- (1973) Theor Chim Acta , vol.28 , pp. 213
- Hariharan, P.C.¹

37
- 84893169025
- (1993) J Comput Chem , vol.14 , pp. 1347
- Schmidt, M.W.¹ Baldridge, K.K.² Boatz, J.A.³ Elbert, S.T.⁴ Gordon, M.S.⁵ Jensen, J.H.⁶ Koseki, S.⁷ Matsunaga, N.⁸ Nguyen, K.A.⁹ Su, S.¹⁰ Windus, T.L.¹¹ Dupuis, M.¹² Montgomery, J.A.¹³

38
- 0003969438
- (suppl 1956-1959, special publ. 18, Chemical Society, London, England, 1965)
- Table of Interatomic Distances and Configurations of Molecules and Ions
- Sutton, I.E.¹

39
- 0027189888
- (1993) Int J Peptide Protein Res , vol.41 , pp. 484
- Jois, D.S.S.¹ Prasad, G.S.² Bednarek, M.³ Easwaran, K.R.K.⁴ Vijayan, M.⁵

40
- 0004236008
- Clarendon: Oxford, England
- (1991) The Biological Chemistry of the Elements: The Inorganic Chemistry of Life
- Frausto Da Silva, J.J.R.¹ Williams, R.P.G.²

41
- 0024396312
- (1989) Annu Rev Biochem , vol.58 , pp. 951-958
- Strynadka, N.C.J.¹ James, M.N.G.²

42
- 84988141603
- (1984) J Comput Chem , vol.5 , pp. 486-499
- Hopfinger, A.J.¹ Pearlstein, R.A.²

43
- 0026409654
- (1991) Adv Prot Chem , vol.42 , pp. 77-144
- McPhalen, C.A.¹ Strynadka, N.C.² James, M.N.³

44
- 0019209443
- (1980) J Mol Biol , vol.142 , pp. 531
- Phillips, S.E.V.¹

45
- 0000243829
- (1993) J Appl Cryst , vol.26 , pp. 283
- Laskowski, R.A.¹ MacArthur, M.W.² Moss, D.S.³ Thornton, J.M.⁴

46
- 0027386759
- (1993) Biochem , vol.32 , pp. 401-403
- Tan, R.C.¹ Truong, T.N.² McCammon, J.A.³

47
- 0031022260
- (1997) Biophys J , vol.72 , pp. 619-626
- Van Beek, J.¹ Callender, R.² Gunner, M.R.³

48
- 0030782484
- (1997) Biophys J , vol.73 , pp. 2733
- Swartz, P.D.¹ Ichiye, T.²

49
- 0030068091
- (1996) J Biol Chem , vol.271 , pp. 4023-4030
- Rodriguez-Lopez, J.N.¹ Smith, A.T.² Thorneley, R.N.F.³

50
- 0029070619
- (1995) Biochem Soc Trans , vol.23 , pp. 240-244
- Smulevich, G.¹

51
- 0024260626
- (1988) Adv Prot Chem , vol.39 , pp. 125-189
- Burley, S.K.¹ Petsko, G.A.²

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