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Volumn 66, Issue , 2001, Pages 591-598

Thermodynamics and kinetics of central domain assembly

(2)  Recht, M I a   Williamson, J R a  

a NONE

Author keywords

[No Author keywords available]

Indexed keywords

LARGE SUBUNIT RIBOSOMAL RNA; RIBONUCLEOPROTEIN; RIBOSOME RNA; RNA 16S; SMALL SUBUNIT RIBOSOMAL RNA;

EID: 0035788041     PISSN: 00917451     EISSN: None     Source Type: Book Series    
DOI: 10.1101/sqb.2001.66.591     Document Type: Conference Paper
Times cited : (5)

References (41)
  • 1
    • 0034065972 scopus 로고    scopus 로고
    • A hierarchy of RNA subdomains in assembly of the central domain of the 30 S ribosomal subunit
    • Agalarov S.C. and Williamson J.R. 2000. A hierarchy of RNA subdomains in assembly of the central domain of the 30 S ribosomal subunit. RNA 6: 402.
    • (2000) RNA , vol.6 , pp. 402
    • Agalarov, S.C.1    Williamson, J.R.2
  • 2
    • 0034615759 scopus 로고    scopus 로고
    • Structure of the S15,S6,S18-rRNA complex: Assembly of the 30S ribosome central domain
    • Agalarov S.C., Sridhar Prasad G., Funke P.M., Stout C.D., and Williamson J.R. 2000. Structure of the S15,S6,S18-rRNA complex: Assembly of the 30S ribosome central domain. Science 288: 107.
    • (2000) Science , vol.288 , pp. 107
    • Agalarov, S.C.1    Sridhar Prasad, G.2    Funke, P.M.3    Stout, C.D.4    Williamson, J.R.5
  • 4
    • 0034637111 scopus 로고    scopus 로고
    • The complete atomic structure of the large ribosomal subunit at 2.4 Å resolution
    • Ban N., Nissen P., Hansen J., Moore P. B., and Steitz T. A. 2000. The complete atomic structure of the large ribosomal subunit at 2.4 Å resolution. Science 289: 905.
    • (2000) Science , vol.289 , pp. 905
    • Ban, N.1    Nissen, P.2    Hansen, J.3    Moore, P.B.4    Steitz, T.A.5
  • 5
    • 0031856886 scopus 로고    scopus 로고
    • Effects of polyvalent cations on the folding of an rRNA three-way junction and binding of ribosomal protein S15
    • Batey R.T. and Williamson J.R. 1998. Effects of polyvalent cations on the folding of an rRNA three-way junction and binding of ribosomal protein S15. RNA 4: 984.
    • (1998) RNA , vol.4 , pp. 984
    • Batey, R.T.1    Williamson, J.R.2
  • 6
    • 0030606880 scopus 로고    scopus 로고
    • Interaction of the Bacillus stearothermophilus ribosomal protein S15 with 16 S rRNA. I. Defining the minimal RNA site
    • -. 1996a. Interaction of the Bacillus stearothermophilus ribosomal protein S15 with 16 S rRNA. I. Defining the minimal RNA site. J. Mol. Biol. 261: 536.
    • (1996) J. Mol. Biol. , vol.261 , pp. 536
  • 7
    • 0030606876 scopus 로고    scopus 로고
    • Interaction of the Bacillus stearothermophilus ribosomal protein S15 with 16 S rRNA: II. Specificity determinants of RNA-protein recognition
    • -. 1996b. Interaction of the Bacillus stearothermophilus ribosomal protein S15 with 16 S rRNA: II. Specificity determinants of RNA-protein recognition. J. Mol. Biol. 261: 550.
    • (1996) J. Mol. Biol. , vol.261 , pp. 550
  • 8
    • 0023057867 scopus 로고
    • Studies on the kinetic sequence of in vitro ribosome assembly using cibacron blue F3GA as a general assembly inhibitor
    • Datta D., Changchien L.M., and Craven G.R. 1986. Studies on the kinetic sequence of in vitro ribosome assembly using cibacron blue F3GA as a general assembly inhibitor. Nucleic Acids Res. 14: 4095.
    • (1986) Nucleic Acids Res. , vol.14 , pp. 4095
    • Datta, D.1    Changchien, L.M.2    Craven, G.R.3
  • 9
    • 0025912716 scopus 로고
    • Lack of complete cooperativity of ribosome assembly in vitro and its possible relevance to in vivo ribosome assembly and the regulation of ribosomal gene expression
    • Dodd J., Kolb J.M., and Nomura M. 1991. Lack of complete cooperativity of ribosome assembly in vitro and its possible relevance to in vivo ribosome assembly and the regulation of ribosomal gene expression. Biochimie 73: 757.
    • (1991) Biochimie , vol.73 , pp. 757
    • Dodd, J.1    Kolb, J.M.2    Nomura, M.3
  • 10
  • 11
  • 12
    • 0028071557 scopus 로고
    • Collection of small subunit (16S- and 16S-like) ribosomal RNA structures: 1994
    • Gutell R.R. 1994. Collection of small subunit (16S- and 16S-like) ribosomal RNA structures: 1994. Nucleic Acids Res. 22: 3502.
    • (1994) Nucleic Acids Res. , vol.22 , pp. 3502
    • Gutell, R.R.1
  • 15
    • 0015793219 scopus 로고
    • Rate determining step in the reconstitution of Escherichia coli 30S ribosomal subunits
    • Held W.A. and Nomura M. 1973. Rate determining step in the reconstitution of Escherichia coli 30S ribosomal subunits. Biochemistry 12: 3273.
    • (1973) Biochemistry , vol.12 , pp. 3273
    • Held, W.A.1    Nomura, M.2
  • 16
    • 0015901113 scopus 로고
    • Reconstitution of Escherichia coli 30 S ribosomal subunits from purified molecular components
    • Held W.A., Mizushima S., and Nomura M. 1973. Reconstitution of Escherichia coli 30 S ribosomal subunits from purified molecular components. J. Biol. Chem. 248: 5720.
    • (1973) J. Biol. Chem. , vol.248 , pp. 5720
    • Held, W.A.1    Mizushima, S.2    Nomura, M.3
  • 17
    • 0016153699 scopus 로고
    • Assembly mapping of 30 S ribosomal proteins from Escherichia coli. Further studies
    • Held W.A., Ballou B., Mizushima S., and Nomura M. 1974. Assembly mapping of 30 S ribosomal proteins from Escherichia coli. Further studies. J. Biol. Chem. 249: 3103.
    • (1974) J. Biol. Chem. , vol.249 , pp. 3103
    • Held, W.A.1    Ballou, B.2    Mizushima, S.3    Nomura, M.4
  • 18
    • 0021093443 scopus 로고
    • Cross-links between ribosomal proteins of 30S subunits in 70S tight couples and in 30S subunits
    • Lambert J.M., Boileau G., Cover J.A., and Traut R.R. 1983. Cross-links between ribosomal proteins of 30S subunits in 70S tight couples and in 30S subunits. Biochemistry 22: 3913.
    • (1983) Biochemistry , vol.22 , pp. 3913
    • Lambert, J.M.1    Boileau, G.2    Cover, J.A.3    Traut, R.R.4
  • 19
    • 36949051443 scopus 로고
    • Assembly mapping of 30S ribosomal proteins from E. coli
    • Mizushima S. and Nomura M. 1970. Assembly mapping of 30S ribosomal proteins from E. coli. Nature 226: 1214.
    • (1970) Nature , vol.226 , pp. 1214
    • Mizushima, S.1    Nomura, M.2
  • 21
    • 0019830772 scopus 로고
    • Secondary structure of 16S ribosomal RNA
    • Noller H.F. and Woese C.R. 1981. Secondary structure of 16S ribosomal RNA. Science 212: 403.
    • (1981) Science , vol.212 , pp. 403
    • Noller, H.F.1    Woese, C.R.2
  • 24
    • 0023688660 scopus 로고
    • Assembly of the 30S subunit from Escherichia coli ribosomes occurs via two assembly domains which are initiated by S4 and S7
    • Nowotny V. and Nierhaus K.H. 1988. Assembly of the 30S subunit from Escherichia coli ribosomes occurs via two assembly domains which are initiated by S4 and S7. Biochemistry 27: 7051.
    • (1988) Biochemistry , vol.27 , pp. 7051
    • Nowotny, V.1    Nierhaus, K.H.2
  • 25
    • 0032559410 scopus 로고    scopus 로고
    • Protein and Mg(2+)-induced conformational changes in the S15 binding site of 16 S ribosomal RNA
    • Orr J.W., Hagerman P.J., and Williamson J.R. 1998. Protein and Mg(2+)-induced conformational changes in the S15 binding site of 16 S ribosomal RNA. J. Mol. Biol. 275: 453.
    • (1998) J. Mol. Biol. , vol.275 , pp. 453
    • Orr, J.W.1    Hagerman, P.J.2    Williamson, J.R.3
  • 26
    • 0029286628 scopus 로고
    • Hydroxyl radical footprinting of ribosomal proteins on 16S rRNA
    • Powers T. and Noller H.F. 1995. Hydroxyl radical footprinting of ribosomal proteins on 16S rRNA. RNA 1: 194.
    • (1995) RNA , vol.1 , pp. 194
    • Powers, T.1    Noller, H.F.2
  • 27
    • 0027171312 scopus 로고
    • Dynamics of in vitro assembly of 16S rRNA into 30S ribosomal subunits
    • Powers T., Daubresse G., and Noller H.F. 1993. Dynamics of in vitro assembly of 16S rRNA into 30S ribosomal subunits. J. Mol. Biol. 232: 362.
    • (1993) J. Mol. Biol. , vol.232 , pp. 362
    • Powers, T.1    Daubresse, G.2    Noller, H.F.3
  • 28
    • 0035850733 scopus 로고    scopus 로고
    • Central domain assembly: Thermodynamics and kinetics of S6 and S18 binding to an S15-RNA complex
    • Recht M.I. and Williamson J.R. 2001. Central domain assembly: Thermodynamics and kinetics of S6 and S18 binding to an S15-RNA complex. J. Mol. Biol. 313: 35.
    • (2001) J. Mol. Biol. , vol.313 , pp. 35
    • Recht, M.I.1    Williamson, J.R.2
  • 29
    • 0027979072 scopus 로고
    • Independent in vitro assembly of a ribonucleoprotein particle containing the 3′ domain of 16S rRNA
    • Samaha R.R., O'Brien B., O'Brien T.W., and Noller H.F. 1994. Independent in vitro assembly of a ribonucleoprotein particle containing the 3′ domain of 16S rRNA. Proc. Natl. Acad. Sci. 91: 7884.
    • (1994) Proc. Natl. Acad. Sci. , vol.91 , pp. 7884
    • Samaha, R.R.1    O'Brien, B.2    O'Brien, T.W.3    Noller, H.F.4
  • 31
    • 0029909551 scopus 로고    scopus 로고
    • The 16S rRNA binding site of Thermus thermophilus ribosomal protein S15: Comparison with Escherichia coli S15, minimum site and structure
    • Serganov A.A., Masquida B., Westhof E., Cachia C., Portier C., Garber M., Ehresmann B., and Ehresmann C. 1996. The 16S rRNA binding site of Thermus thermophilus ribosomal protein S15: Comparison with Escherichia coli S15, minimum site and structure. RNA 2: 1124.
    • (1996) RNA , vol.2 , pp. 1124
    • Serganov, A.A.1    Masquida, B.2    Westhof, E.3    Cachia, C.4    Portier, C.5    Garber, M.6    Ehresmann, B.7    Ehresmann, C.8
  • 32
    • 0017102481 scopus 로고
    • Identification of neighboring protein pairs in the Escherichia coli 30 S ribosomal subunit by crosslinking with methyl-4-mercaptobutyrimidate
    • Sommer A. and Traut R.R. 1976. Identification of neighboring protein pairs in the Escherichia coli 30 S ribosomal subunit by crosslinking with methyl-4-mercaptobutyrimidate. J. Mol. Biol. 106: 995.
    • (1976) J. Mol. Biol. , vol.106 , pp. 995
    • Sommer, A.1    Traut, R.R.2
  • 33
    • 0024344098 scopus 로고
    • RNA-protein interactions in 30S ribosomal subunits: Folding and function of 16S rRNA
    • Stern S., Powers T., Changchien L.-M., and Noller H.F. 1989. RNA-protein interactions in 30S ribosomal subunits: Folding and function of 16S rRNA. Science 244: 783.
    • (1989) Science , vol.244 , pp. 783
    • Stern, S.1    Powers, T.2    Changchien, L.-M.3    Noller, H.F.4
  • 34
    • 0024292424 scopus 로고
    • Interaction of ribosomal proteins, S6, S8, S15 and S18 with the central domain of 16 S ribosomal RNA
    • Svensson P., Changchien L.-M., Craven G.R., and Noller H.F. 1988. Interaction of ribosomal proteins, S6, S8, S15 and S18 with the central domain of 16 S ribosomal RNA. J. Mol. Biol. 200: 301.
    • (1988) J. Mol. Biol. , vol.200 , pp. 301
    • Svensson, P.1    Changchien, L.-M.2    Craven, G.R.3    Noller, H.F.4
  • 35
    • 0017689744 scopus 로고
    • In vivo reassembly of 30-S ribosomal subunits following their specific destruction by thermal shock
    • Tal M., Silberstein A., and Moyner K. 1977. In vivo reassembly of 30-S ribosomal subunits following their specific destruction by thermal shock. Biochim. Biophys. Acta. 479: 479.
    • (1977) Biochim. Biophys. Acta , vol.479 , pp. 479
    • Tal, M.1    Silberstein, A.2    Moyner, K.3
  • 36
    • 0014266752 scopus 로고
    • Structure and function of E. coli ribosomes. V. Reconstitution of functionally active 30S ribosomal particles from RNA and proteins
    • Traub P. and Nomura M. 1968. Structure and function of E. coli ribosomes. V. Reconstitution of functionally active 30S ribosomal particles from RNA and proteins. Proc. Natl. Acad. Sci. 59: 777.
    • (1968) Proc. Natl. Acad. Sci. , vol.59 , pp. 777
    • Traub, P.1    Nomura, M.2
  • 37
    • 0014693477 scopus 로고
    • Structure and function of Escherichia coli ribosomes. VI. Mechanism of assembly of 30 s ribosomes studied in vitro
    • -. 1969. Structure and function of Escherichia coli ribosomes. VI. Mechanism of assembly of 30 s ribosomes studied in vitro. J. Mol. Biol. 40: 391.
    • (1969) J. Mol. Biol. , vol.40 , pp. 391
  • 38
    • 0014635259 scopus 로고
    • Studies on the assembly of ribosomes in vitro
    • -. 1970. Studies on the assembly of ribosomes in vitro. Cold Spring Harbor Symp. Quant. Biol. 34: 63.
    • (1970) Cold Spring Harbor Symp. Quant. Biol. , vol.34 , pp. 63
  • 39
    • 0027532926 scopus 로고
    • Chemical evidence for domain assembly of the Escherichia coli 30S ribosome
    • Weitzmann C.J., Cunningham P.R., Nurse K., and Ofengand J. 1993. Chemical evidence for domain assembly of the Escherichia coli 30S ribosome. FASEB J. 7: 177.
    • (1993) FASEB J. , vol.7 , pp. 177
    • Weitzmann, C.J.1    Cunningham, P.R.2    Nurse, K.3    Ofengand, J.4


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