-
1
-
-
0028962525
-
Ionic interactions and the global conformations of the hammerhead ribozyme
-
Bassi GS, Mollegaard NE, Murchie AIH, von Kitzing E, Lilley DMJ. 1995. Ionic interactions and the global conformations of the hammerhead ribozyme. Struct Biol 2:45-55.
-
(1995)
Struct Biol
, vol.2
, pp. 45-55
-
-
Bassi, G.S.1
Mollegaard, N.E.2
Murchie, A.I.H.3
Von Kitzing, E.4
Lilley, D.M.J.5
-
2
-
-
0029903452
-
The ion-induced folding of the hammerhead ribozyme: Core sequence changes that perturb folding into the active conformation
-
Bassi GS, Murchie AIH, Lilley DMJ. 1996. The ion-induced folding of the hammerhead ribozyme: Core sequence changes that perturb folding into the active conformation. RNA 2:756-768.
-
(1996)
RNA
, vol.2
, pp. 756-768
-
-
Bassi, G.S.1
Murchie, A.I.H.2
Lilley, D.M.J.3
-
3
-
-
0030606880
-
Interaction of the Bacillus stearothermophilus ribosomal protein S15 with 16 S rRNA: I. Defining the minimal RNA site
-
Batey RT, Williamson JR. 1996a. Interaction of the Bacillus stearothermophilus ribosomal protein S15 with 16 S rRNA: I. Defining the minimal RNA site. J Mol Biol 261:536-549.
-
(1996)
J Mol Biol
, vol.261
, pp. 536-549
-
-
Batey, R.T.1
Williamson, J.R.2
-
4
-
-
0030606876
-
Interaction of the Bacillus stearothermophilus ribosomal protein S15 with 16 S rRNA: II. Specificity determinants of RNA-protein recognition
-
Batey RT, Williamson JR. 1996b. Interaction of the Bacillus stearothermophilus ribosomal protein S15 with 16 S rRNA: II. Specificity determinants of RNA-protein recognition. J Mol Biol 261:550-567.
-
(1996)
J Mol Biol
, vol.261
, pp. 550-567
-
-
Batey, R.T.1
Williamson, J.R.2
-
5
-
-
0025771080
-
Three-dimensional model of Escherichia coli ribosomal 5 S RNA as deduced from structure probing in solution and computer modeling
-
Brunel C, Romby P, Westhof E, Ehresmann C, Ehresmann B. 1991. Three-dimensional model of Escherichia coli ribosomal 5 S RNA as deduced from structure probing in solution and computer modeling. J Mol Biol 221:293-308.
-
(1991)
J Mol Biol
, vol.221
, pp. 293-308
-
-
Brunel, C.1
Romby, P.2
Westhof, E.3
Ehresmann, C.4
Ehresmann, B.5
-
6
-
-
0030587890
-
Metal-binding sites in the major groove of a large ribozyme domain
-
Cate JH, Doudna JA. 1996. Metal-binding sites in the major groove of a large ribozyme domain. Structure 4:1221-1229.
-
(1996)
Structure
, vol.4
, pp. 1221-1229
-
-
Cate, J.H.1
Doudna, J.A.2
-
7
-
-
0029820625
-
Crystal structure of a group I ribozyme domain: Principles of RNA packing
-
Cate JH, Gooding AR, Podell E, Zhou K, Golden BL, Kundrot CE, Cech TR, Doudna JA. 1996. Crystal structure of a group I ribozyme domain: Principles of RNA packing. Science 273:1678-1685.
-
(1996)
Science
, vol.273
, pp. 1678-1685
-
-
Cate, J.H.1
Gooding, A.R.2
Podell, E.3
Zhou, K.4
Golden, B.L.5
Kundrot, C.E.6
Cech, T.R.7
Doudna, J.A.8
-
8
-
-
0030929889
-
A magnesium ion core at the heart of a ribozyme domain
-
Cate JH, Hanna RL, Doudna JA. 1997. A magnesium ion core at the heart of a ribozyme domain. Nature Struct Biol 4:553-558.
-
(1997)
Nature Struct Biol
, vol.4
, pp. 553-558
-
-
Cate, J.H.1
Hanna, R.L.2
Doudna, J.A.3
-
11
-
-
0025998488
-
Role of divalent metal ions in the hammerhead RNA cleavage reaction
-
Dahm SC, Uhlenbeck OC. 1991. Role of divalent metal ions in the hammerhead RNA cleavage reaction. Biochemistry 30:9464-9469.
-
(1991)
Biochemistry
, vol.30
, pp. 9464-9469
-
-
Dahm, S.C.1
Uhlenbeck, O.C.2
-
12
-
-
0029400480
-
NMRPipe: A multidimensional spectral processing system based on UNIX pipes
-
Delaglio F, Grzesiek S, Vuister G, Zu G, Pfeiffer J, Bax A. 1995. NMRPipe: A multidimensional spectral processing system based on UNIX pipes. J Biol NMR 6:277-293.
-
(1995)
J Biol NMR
, vol.6
, pp. 277-293
-
-
Delaglio, F.1
Grzesiek, S.2
Vuister, G.3
Zu, G.4
Pfeiffer, J.5
Bax, A.6
-
13
-
-
0028071557
-
Collection of small subunit (16S- and 16S-like) ribosomal RNA structures: 1994
-
Gutell RR. 1994. Collection of small subunit (16S- and 16S-like) ribosomal RNA structures: 1994. Nucleic Acids Res 22:3502-3507.
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 3502-3507
-
-
Gutell, R.R.1
-
14
-
-
0016153699
-
Assembly mapping of 30 S ribosomal proteins from Escherichia coli. Further studies
-
Held WA, Mizushima S, Nomura M. 1974. Assembly mapping of 30 S ribosomal proteins from Escherichia coli. Further studies. J Biol Chem 249:3103-3111.
-
(1974)
J Biol Chem
, vol.249
, pp. 3103-3111
-
-
Held, W.A.1
Mizushima, S.2
Nomura, M.3
-
15
-
-
48749149745
-
Solvent suppression in fourier transform nuclear magnetic resonance
-
Hore PJ. 1983. Solvent suppression in fourier transform nuclear magnetic resonance. J Magn Reson 55:283-300.
-
(1983)
J Magn Reson
, vol.55
, pp. 283-300
-
-
Hore, P.J.1
-
16
-
-
0017055057
-
Crystallographic refinement of yeast phenylalanine transfer RNA at 2.5 Å resolution
-
Jack A, Lander JE, Klug A. 1976. Crystallographic refinement of yeast phenylalanine transfer RNA at 2.5 Å resolution. J Mol Biol 108:619-649.
-
(1976)
J Mol Biol
, vol.108
, pp. 619-649
-
-
Jack, A.1
Lander, J.E.2
Klug, A.3
-
18
-
-
0031570344
-
Solution structure of a metal-binding site in the major groove of RNA complexed with cobalt (III) hexammine
-
Kieft JS, Tinoco IJ. 1997. Solution structure of a metal-binding site in the major groove of RNA complexed with cobalt (III) hexammine. Structure 5:713-721.
-
(1997)
Structure
, vol.5
, pp. 713-721
-
-
Kieft, J.S.1
Tinoco, I.J.2
-
19
-
-
0027465927
-
The phylogenetically conserved doublet tertiary interaction in domain III of the large subunit rRNA is crucial for ribosomal protein binding
-
Kooi EA, Rutgers CA, Mulder A, Riet JVt, Venema J, Raue HA. 1993. The phylogenetically conserved doublet tertiary interaction in domain III of the large subunit rRNA is crucial for ribosomal protein binding. Proc Natl Acad Sci USA 90:213-216.
-
(1993)
Proc Natl Acad Sci USA
, vol.90
, pp. 213-216
-
-
Kooi, E.A.1
Rutgers, C.A.2
Mulder, A.3
Riet, J.Vt.4
Venema, J.5
Raue, H.A.6
-
20
-
-
0028237035
-
Stabilization of RNA structure by Mg ions: Specific and non-specific effects
-
Laing LG, Gluick TC, Draper DE. 1994. Stabilization of RNA structure by Mg ions: Specific and non-specific effects. J Mol Biol 237:577-587.
-
(1994)
J Mol Biol
, vol.237
, pp. 577-587
-
-
Laing, L.G.1
Gluick, T.C.2
Draper, D.E.3
-
21
-
-
0027389356
-
Self-cleaving catalytic RNA
-
Long DM, Uhlenbeck OC. 1993. Self-cleaving catalytic RNA. FASEB J 7:25-30.
-
(1993)
FASEB J
, vol.7
, pp. 25-30
-
-
Long, D.M.1
Uhlenbeck, O.C.2
-
23
-
-
0028365816
-
A tyrosyl-tRNA synthetase can function similarly to an RNA structure in the Tetrahymena ribozyme
-
Mohr G, Caprara MG, Guo Q, Lambowitz AM. 1994. A tyrosyl-tRNA synthetase can function similarly to an RNA structure in the Tetrahymena ribozyme. Nature 370:147-150.
-
(1994)
Nature
, vol.370
, pp. 147-150
-
-
Mohr, G.1
Caprara, M.G.2
Guo, Q.3
Lambowitz, A.M.4
-
24
-
-
0026639175
-
The Neurospora CYT-18 protein suppresses defects in the phage T4 td intron by stabilizing the catalytically active structure of the intron core
-
Mohr G, Zhang A, Gianelos JA, Belfort M, Lambowitz AM. 1992. The Neurospora CYT-18 protein suppresses defects in the phage T4 td intron by stabilizing the catalytically active structure of the intron core. Cell 69:483-494.
-
(1992)
Cell
, vol.69
, pp. 483-494
-
-
Mohr, G.1
Zhang, A.2
Gianelos, J.A.3
Belfort, M.4
Lambowitz, A.M.5
-
25
-
-
0032559410
-
2+-induced conformational changes in the S15 binding site of 16 S ribosomal RNA
-
2+-induced conformational changes in the S15 binding site of 16 S ribosomal RNA. J Mol Biol 275:453-464.
-
(1998)
J Mol Biol
, vol.275
, pp. 453-464
-
-
Orr, J.W.1
Hagerman, P.J.2
Williamson, J.R.3
-
26
-
-
0003156250
-
Divalent metal ions in RNA folding and catalysis
-
Gesteland R, Atkins JF, eds. Cold Spring Harbor, New York: Cold Spring Harbor Laboratory Press
-
Pan T, Long DM, Uhlenbeck OC. 1993. Divalent metal ions in RNA folding and catalysis. In: Gesteland R, Atkins JF, eds. The RNA world. Cold Spring Harbor, New York: Cold Spring Harbor Laboratory Press. pp 271-302.
-
(1993)
The RNA World
, pp. 271-302
-
-
Pan, T.1
Long, D.M.2
Uhlenbeck, O.C.3
-
27
-
-
0027288848
-
Ribosomal protein S15 from Escherichia coli modulates its own translation by trapping the ribosome on the mRNA initiation loading site
-
Phillipe C, Eyermann F, Benard L, Portier C, Ehresmann B, Ehresmann C. 1993. Ribosomal protein S15 from Escherichia coli modulates its own translation by trapping the ribosome on the mRNA initiation loading site. Proc Natl Acad Sci USA 90:4394-4398.
-
(1993)
Proc Natl Acad Sci USA
, vol.90
, pp. 4394-4398
-
-
Phillipe, C.1
Eyermann, F.2
Benard, L.3
Portier, C.4
Ehresmann, B.5
Ehresmann, C.6
-
28
-
-
0028063567
-
Three-dimensional structure of a hammerhead ribozyme
-
Pley HW, Flaherty KM, McKay DB. 1994. Three-dimensional structure of a hammerhead ribozyme. Nature 372:68-74.
-
(1994)
Nature
, vol.372
, pp. 68-74
-
-
Pley, H.W.1
Flaherty, K.M.2
McKay, D.B.3
-
29
-
-
0025089901
-
Translational autocontrol of the Escherichia coli ribosomal protein S15
-
Portier C, Dondon L, Grunberg-Manago M. 1990a. Translational autocontrol of the Escherichia coli ribosomal protein S15. J Mol Biol 211:407-414.
-
(1990)
J Mol Biol
, vol.211
, pp. 407-414
-
-
Portier, C.1
Dondon, L.2
Grunberg-Manago, M.3
-
30
-
-
0025168246
-
Translational control of ribosomal protein S15
-
Portier C, Philippe E, Dondon L, Grunberg-Manago M, Ebel JP, Ehresmann B, Ehresmann C. 1990b. Translational control of ribosomal protein S15. Biochim Biophys Acta 1050:328-336.
-
(1990)
Biochim Biophys Acta
, vol.1050
, pp. 328-336
-
-
Portier, C.1
Philippe, E.2
Dondon, L.3
Grunberg-Manago, M.4
Ebel, J.P.5
Ehresmann, B.6
Ehresmann, C.7
-
31
-
-
0029286628
-
Hydroxyl radical footprinting of ribosomal proteins on 16S rRNA
-
Powers T, Noller HF. 1995. Hydroxyl radical footprinting of ribosomal proteins on 16S rRNA. RNA 1:194-209.
-
(1995)
RNA
, vol.1
, pp. 194-209
-
-
Powers, T.1
Noller, H.F.2
-
32
-
-
0024843738
-
Thermodynamics of protein-RNA recognition in a highly conserved region of the large-subunit ribosomal RNA
-
Ryan PC, Draper DE. 1989. Thermodynamics of protein-RNA recognition in a highly conserved region of the large-subunit ribosomal RNA. Biochemistry 28:9949-9956.
-
(1989)
Biochemistry
, vol.28
, pp. 9949-9956
-
-
Ryan, P.C.1
Draper, D.E.2
-
33
-
-
0025999688
-
Recognition of the highly conserved GTPase center of 23 S ribosomal RNA by ribosomal protein L11 and the antibiotic thiostrepton
-
Ryan PC, Lu M, Draper DE. 1991. Recognition of the highly conserved GTPase center of 23 S ribosomal RNA by ribosomal protein L11 and the antibiotic thiostrepton. J Mol Biol 221:1257-1268.
-
(1991)
J Mol Biol
, vol.221
, pp. 1257-1268
-
-
Ryan, P.C.1
Lu, M.2
Draper, D.E.3
-
35
-
-
0029073091
-
The crystal structure of an all-RNA hammerhead ribozyme: A proposed mechanism for RNA catalytic cleavage
-
Scott WG, Finch JT, Klug A. 1995. The crystal structure of an all-RNA hammerhead ribozyme: A proposed mechanism for RNA catalytic cleavage. Cell 81:991-1002.
-
(1995)
Cell
, vol.81
, pp. 991-1002
-
-
Scott, W.G.1
Finch, J.T.2
Klug, A.3
-
36
-
-
0030968820
-
Ribosomal protein S15 from Thermus thermophilus: Cloning, sequencing, overexpression of the gene and RNA-binding properties of the protein
-
Serganov A, Rak A, Garber M, Reinbolt J, Ehresmann B, Ehresmann C, Grunberg-Manago M, Portier C. 1997. Ribosomal protein S15 from Thermus thermophilus: Cloning, sequencing, overexpression of the gene and RNA-binding properties of the protein. Eur J Biochem 246:291-300.
-
(1997)
Eur J Biochem
, vol.246
, pp. 291-300
-
-
Serganov, A.1
Rak, A.2
Garber, M.3
Reinbolt, J.4
Ehresmann, B.5
Ehresmann, C.6
Grunberg-Manago, M.7
Portier, C.8
-
37
-
-
0029909551
-
The 16S rRNA binding site of Thermus thermophilus ribosomal protein S15: Comparison with Escherichia coli S15, minimum site and structure
-
Serganov AA, Masquida B, Westhof E, Cachia C, Portier C, Garber M, Ehresmann B, Ehresmann C. 1996. The 16S rRNA binding site of Thermus thermophilus ribosomal protein S15: Comparison with Escherichia coli S15, minimum site and structure. RNA 2:1124-1138.
-
(1996)
RNA
, vol.2
, pp. 1124-1138
-
-
Serganov, A.A.1
Masquida, B.2
Westhof, E.3
Cachia, C.4
Portier, C.5
Garber, M.6
Ehresmann, B.7
Ehresmann, C.8
-
38
-
-
0023221419
-
A small catalytic oligoribonucleotide
-
Uhlenbeck OC. 1987. A small catalytic oligoribonucleotide. Nature 328:596-600.
-
(1987)
Nature
, vol.328
, pp. 596-600
-
-
Uhlenbeck, O.C.1
-
39
-
-
0029155840
-
Protein facilitation of group I intron splicing by assembly of the catalytic core and the 5′ splice site domain
-
Weeks KM, Cech TR. 1995. Protein facilitation of group I intron splicing by assembly of the catalytic core and the 5′ splice site domain. Cell 82:221-230.
-
(1995)
Cell
, vol.82
, pp. 221-230
-
-
Weeks, K.M.1
Cech, T.R.2
-
40
-
-
0030593036
-
Assembly of a ribonucleoprotein catalyst by tertiary structure capture
-
Weeks KM, Cech TR. 1996. Assembly of a ribonucleoprotein catalyst by tertiary structure capture. Science 271:345-348.
-
(1996)
Science
, vol.271
, pp. 345-348
-
-
Weeks, K.M.1
Cech, T.R.2
-
41
-
-
0024974668
-
Computer modeling from solution data of spinach chloroplast and of Xenopus laevis somatic and oocyte 5 S rRNAs
-
Westhof E, Romby P, Romaniuk PJ, Ebel JP, Ehresmann C, Ehresmann B. 1989. Computer modeling from solution data of spinach chloroplast and of Xenopus laevis somatic and oocyte 5 S rRNAs. J Mol Biol 207:417-431.
-
(1989)
J Mol Biol
, vol.207
, pp. 417-431
-
-
Westhof, E.1
Romby, P.2
Romaniuk, P.J.3
Ebel, J.P.4
Ehresmann, C.5
Ehresmann, B.6
-
43
-
-
0025748046
-
Synthesis and purification of large amounts of RNA oligonucleotides
-
Wyatt JR, Chastain M, Puglisi JD. 1991. Synthesis and purification of large amounts of RNA oligonucleotides. Biotechniques 11:764-769.
-
(1991)
Biotechniques
, vol.11
, pp. 764-769
-
-
Wyatt, J.R.1
Chastain, M.2
Puglisi, J.D.3
-
44
-
-
0029874598
-
The kinetic folding pathway of the Tetrahymena ribozyme reveals possible similarities between RNA and protein folding
-
Zarrinkar PP, Williamson JR. 1996. The kinetic folding pathway of the Tetrahymena ribozyme reveals possible similarities between RNA and protein folding. Nature Struct Biol 3:432-438.
-
(1996)
Nature Struct Biol
, vol.3
, pp. 432-438
-
-
Zarrinkar, P.P.1
Williamson, J.R.2
|