Single-molecule enzymology

Springer Series in Chemical Physics

Volumn 67, Issue , 2001, Pages 227-240

  Xie, X S ^a   Lu, H P ^a  

^a HARVARD UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CHEMICAL REACTION; CONFERENCE PAPER; CONFORMATION; CRYSTAL STRUCTURE; ENZYME KINETICS; ENZYME MECHANISM; ENZYMOLOGY; FLUORESCENCE MICROSCOPY; MACROMOLECULE; MEASUREMENT; MOLECULAR DYNAMICS; SIMULATION;

EID: 0035778252     PISSN: 01726218     EISSN: None     Source Type: Book Series    
DOI: 10.1007/978-3-642-56544-1_13     Document Type: Conference Paper

References (57)

1. C. L. Brooks III, M. Karplus, and B. M. Pettitt, Proteins: A Theoretical Perspective of Dynamics, Structure, and Thermodynamics, Advances in Chemical Physics, vol. LXXI (John Wiley & Sons Inc., New York, 1998)
2. J. A. McCammon and S. C. Harvey, Dynamics of Proteins and Nucleic Acids (Cambridge Univ. Press, Cambridge, 1987)
3. Single-Channel Recording, 2nd Ed., B. Sakmann and E. Neher (eds.) (Plenum Press, New York, 1995)
4. M. Radmacher, M. Fritz, H. G. Hansma, and P. K. Hansma, Science 265, 1577-1579 (1994)
5. W. A. Rees, R. W. Keller, J. P. Vesenka, and C. Bustamante, Science 260, 1646-1649 (1993)
6. A. Ashkin and J. M. Dziedzic, Science 235, 1517-1520 (1987)
7. T. T. Perkins, S. R. Quake, D. E. Smith, and S. Chu, Science 264, 822-826 (1994)
8. X. S. Xie and J. K. Trautman, Ann. Rev. Phys. Chem. 59, 441-480 (1998)
9. S. Nie and R. N. Zare, Ann. Rev. Biophys. Biomol. Struct. 26, 567-596 (1997)
10. W. E. Moerner and M. Orrit, Science, 283, 1670-1676 (1999)
11. S. Weiss, Science, 283, 1676-1683, (1999)
12. T. Funatsu, Y. Harada, M. Tokunaga, K. Saito, T. Yanagida, Nature 374, 555-559 (1995)
13. R. D. Vale, T. Funatsu, D. W. Pierce, L. Romberg, Y. Harada, and T. Yanagida, Nature 380, 451-453 (1996)
14. A. Ishijima, H. Kojima, T. Funatsu, M. Tokunaga, H. Higuchi, H. Tanaka, and T. Yanagida, Cell 92, 161-171 (1998)
15. H. Noji, R. Yasuda, M. Yoshida, and K. Kinosita, Nature 386, 299-302 (1997)
16. R. Yasuda, H. Moji, K. Kinoshita, and M. Yoshida, Cell 93, 1117-1124 (1997)
17. M. J. Schnitzer, S. M. Block, Nature 388, 386-390 (1997)
18. H. P. Lu, L. Xun, and X.S. Xie, Science, 282, 1877-1882 (1998)
19. T. Ha, A. Y. Ting, J. Liang, W. B. Caldwell, A. A. Deniz, D. S. Chemla, P. G. Schultz, and S. Weiss, Proc. Natl. Acad. Sci. USA 96, 893-898 (1999)
20. L. Edman, Z. Foldes-Papp, S. Wennmalm, and R. Rigler, Chem. Phys. 247, 11-22 (1999)
21. D. Magde, E. Elson, and W. W. Webb, Phys. Rev. Lett. 29, 705-708 (1972)
22. G. Feher and M. Weissman, Proc. Nat. Acad. Sci. USA 70, 870-875 (1973)
23. S. Maiti, U. Haupts, and W. W. Webb, Proc. Natl. Acad. Sci. USA 94, 11753-11757 (1997)
24. M. Eigen and R. Rigler, Proc. Natl. Acad. Sci. USA 91, 5740-5747 (1994)
25. R. Zwanzig, Acc. Chem. Res. 23, 148-152 (1990)
26. Q. F. Xue and E. S. Yeung, Nature 373, 681-683 (1995)
27. D. B. Craig, E. A. Arriaga, J. C. Y. Wong, H. Lu, and N. J. Dovichi, J. Am. Chem. Soc. 118, 5245-5253 (1996)
28. J. J. Macklin, J. K. Trautman, T. D. Harris, and L. E. Brus, Science 272, 255-258 (1996)
29. H. P. Lu and X. S. Xie, Nature 385, 143-146 (1997)
30. X. S. Xie and R. C. Dunn, Science 265, 361-364 (1994)
31. M. T. Ha, T. Enderle, D. S. Chemla, P. R. Selvin, and S. Weiss, Phys. Rev. Lett. 77, 3979-3982 (1996)
32. E. J. G. Peterman, S. Brasselet, and W. E. Moerner, J. Phys. Chem. A 103(49), 10553-10560 (1999)
33. T. Palmer, Understanding Enzymes, 4th ed. (Prentice Hall, New York, 1991) Chap. 9
34. M. J. Schnitzer, S. M. Block, "Protein kinesis: The dynamics of protein trafficking and stability," Cold Spring Harbor Symp. Quant. Biol. 60, 793-802 (1995)
35. J. Dapprich, U. Mets, W. Simm, M. Eigen, and R. Rigler, Exp. Tech. Phys. 41, 259-264, (1995)
36. C. Eggeling, J. R. Fries, L. Brand, R. Gunther, and C. A. M. Seidel, Proc. Natl. Acad. USA 95, 1556-1561 (1998)
37. Y. Jia, A. Sytnik, L. Li, S. Vladimarov, B. S. Coopeman, and R. M. Hochstrasser, Proc. Natl. Acad. Sci. USA 94, 7932-7936 (1997)
38. E. Geva and J. L. Skinner, Chem. Phys. Lett. 288, 225-229 (1998)
39. G. Schenter, H. P. Lu, and X. S. Xie, J. Phys. Chem. A 103, 10477-10488 (1999)
40. N. Agmon and J. J. Hopfield, J. Chem. Phys. 78, 6947-6959 (1983)
41. J. Wang and P. Wolynes, J. Chem. Phys. 110, 4812 (1998)
42. J. Wang and P. Wolynes, Phys. Rev. Lett. 74, 4317-4320 (1995)
43. J. R. Knowles, Nature 350, 121-124 (1991)
44. W. R. Cannon, S. F. Singleton, and S. J. Benkovic, Nat. Struct. Biol. 3, 821-833 (1996)
45. M. Karplus, J. Phys. Chem. B 104, 3721-3743 (2000)
46. J. A. McCammon, Simplicity and Complexity in Proteins and Nucleic Acids, H. Frauenfelder, J. Deisenhofer, and P. Wolynes (eds) (Dahlem Univ. Press, Berlin, 1999)
47. W. N. Lipscomb, Acc. Chem. Res. 15, 232 (1982)
48. S. J. Hagen and W. A. Eaton, J. Chem. Phys. 104, 3395-3398 (1996)
49. H. Frauenfelder, F. Parak, and R. D. Young, Ann. Rev. Biophys. Chem. 17, 451-479 (1988)
50. H. Frauenfelder, S. G. Sligar, and P. G. Wolynes, Science 254, 1598-1603 (1991)
51. K. E. Neet and G.R. Anislie, Method Enzym. 64, 192-226 (1980)
52. C. Frieden, Ann. Rev. Biochem. 48, 471-489 (1979)
53. J. Ricard, J. Meunier, and J. Buc, Eur. J. Biochem. 49, 195-208 (1974)
54. P. Stange, A. S. Milhailov, and B. Hess, J. Phys. Chem. 102, 6273-6289 (1998)
55. D. E. Koshland, Nat. Med. 4, xii-xiv (1998)
56. E. J. Sanchez, L. Novotny, and X. S. Xie, Phys. Rev. Lett. 82, 4014 (1999)
57. A. Zumbusch, G. R. Holtom, and X. S. Xie, Phys. Rev. Lett. 82, 4142 (1999)