From cofactor to enzymes. The molecular evolution of pyridoxal-s'-pliosphate-dependent enzymes

Chemical Records

Volumn 1, Issue 6, 2001, Pages 436-447

  Christen, Philipp ^a,b   Mehta, Perdeep K ^a  

^a UNIVERSITY OF ZURICH   (Switzerland)

^b ST JUDE CHILDREN S RESEARCH HOSPITAL   (United States)

Author keywords

Enzymes; Molecular evolution; Pyridoxal 5' phosphate; Vitamin B6

Indexed keywords

AMINO ACID; AMINOTRANSFERASE; ISOMERASE; PYRIDOXAL 5 PHOSPHATE;

CHEMISTRY; METABOLISM; MOLECULAR EVOLUTION; REVIEW;

AMINO ACID ISOMERASES; AMINO ACIDS; EVOLUTION, MOLECULAR; PYRIDOXAL PHOSPHATE; TRANSAMINASES;

EID: 0035755593     PISSN: 15278999     EISSN: None     Source Type: Journal    
DOI: 10.1002/tcr.10005     Document Type: Article

References (64)

1. Webb, E. C. Enzyme Nomenclature 1992, Recommendations of the Nomenclature Committee of the International Union of Biochemistry and Molecular Biology; Academic Press: Orlando, 1992.
2. Jencks, W. P. Catalysis in Chemistry and Enzymology; McGraw-Hill: New York, 1969; p 133.
3. nd ed.; Harcourt/Academic Press: New York, 2001; p 737.
4. Jansonius, J. N. Curr Opinion Struct Biol 1988, 8, 759.
5. Dunathan.H. C. Proc Natl Acad Sci USA 1966, 55, 712.
6. Dunathan, H. C. Adv Enzymol 1971, 35, 79.
7. Kirsch, J.E; Eichele, G.; Ford, G.G.; Vincent, M.G.; Jansonius, J.N.; Gehring, H.; Christen, P. J Mol Biol 1984, 174, 497.
8. Palm, D.; Klein, H.W.; Schinzel, R.; Büchner, M.; Helmreich, E.J.M. Biochemistry 1990, 29, 1099.
9. Mehta, P.K.; Christen, P. Adv Enzymol RAMB 2000, 74, 129.
10. Gribskov, M.; Lüthy, R.; Eisenberg, D. Meth Enzymol 1990, 183, 146.
11. Mehta, P.K.; Argos, P.; Barbour, A.D.; Christen, P. Proteins 1999, 35, 387
12. Pitch, W. M. Syst Zool 1970, 19, 99.
13. Mehta, P. K.; Haie, T. L; Christen, P. Eur J Biochem 1993, 214, 549.
14. Sandmeier, E.; Haie, T. L; Christen, P. Eur J Biochem 1994, 221, 997.
15. Alexander, F. W.; Sandmeier, E.; Mehta, P. K.; Christen, P. Eur J Biochem 1994, 219, 953.
16. Rubinstein, P. A.; Strominger, J. L. J Biol Chem 1974, 249, 3776
17. Pascarella, S.; Schirch, V.; Bossa, F. FEES Lett 1993, 331, 145.
18. Pascarella, S.; Bossa, F. Protein Sci 1994, 3, 701.
19. Huber, B. Diploma thesis, University of Zurich, Zurich, 1995.
20. Bruntner, C; Bormann, C. Eur J Biochem 1998, 254, 347.
21. Taguchi, H.; Ohta, T. J Biol Chem 1991, 266, 12588.
22. Kochhar, S.; Hunziker, P.E.; Leong-Morgenthaler, P.; Hottinger, H. J Biol Chem 1992, 267, 8499.
23. Farber, G. K.; Petsko, G. A. TIBS 1990, 15, 228.
24. Shaw, J. P.; Petsko, G. A.; Ringe, D. Biochemistry 1997, 36, 1329.
25. Kern, A. D.; Oliveira, M. A.; Coffino, P.; Hacken, M. L. Structure 1999, 7, 567.
26. Ouzounis, C.; Kyrpides, N. FEES Lett 1996, 390, 119.
27. Salzmann, D.; Christen, P.; Mehta, P.K.; Sandmeier, E. Biochem Biophys Res Comm 2000, 270, 576.
28. Wilson, A.C.; Carlson, S.S.; White, T.J.Ann Rev Biochem 1977, 46, 573.
29. Perona, J.J.; Craik, C.S. J Biol Chem 1997, 272, 29987.
30. Schonbeck, N.D.; Skalski, M.; Shafer, J.A. J Biol Chem 1975, 250, 5343.
31. Ziak, M.; Jaussi, R.; Gehring, H.; Christen, P. Eur J Biochem 1990, 187, 329.
32. Tobler, H.P.; Gehring, H.; Christen, P. J Biol Chem 1987, 262, 8985.
33. Ziak, M.; Jäger, J.; Malashkevich, V. N.; Gehring, H.; Jaussi, R.; Jansonius, J. N.; Christen, P. Eur J Biochem 1993, 211, 475.
34. Futaki, S.F.; Ueno, H.; Martinez del Pozo, A.; Pospischil, M.A.; Manning, J.M.; Ringe, D.; Stoddard, B.; Tanizawa, K.; Yoshimura, T.; Soda, K. J Biol Chem 1990, 265, 22306.
35. Recsei, P.A.; Snell, E.E. Biochemistry 1970, 9, 1492.
36. Christen, P.; Kasper, P.; Gehring, H.; Sterk, M. FEES Lett 1996, 389, 12.
37. Dunathan, H. G.; Voet, J. G. Proc Natl Acad Sci USA 1974, 71, 3888.
38. Yoshimura, T.; Nishimura, K.; Ito, J.; Esaki, N.; Kagamiyama, H.; Manning, J. M.; Soda, K. J Am Chem Soc 1993, 115, 3897.
39. Voet, J.G.; Hindenlang, D.M.; Blanck, T. J.; Ulevitch, R. J.; Kallen, R. G.; Dunathan, H. C. J Biol Chem 1973, 248, 841.
40. Sugio, S.; Patsko, G. A.; Manning, M.; Soda, K.; Ringe, D. Biochemistry 1995, 34, 9661.
41. Peisach, D.; Chipman, D.M.; van Ophem, P.W.; Manning, J.M.; Ringe, D. Biochemistry 1998, 37, 4958.
42. Liao, D.-L; Breddam, K.; Sweet, R. M.; Bullock, T.; Remington, S. J. Biochemistry 1992, 31, 9796.
43. Mouratou, B.; Kasper, P.; Gehring, H.; Christen, P. J Biol Chem 1999, 274, 1320.
44. Graber, R.; Kasper, P.; Malashkevich, V.N.; Strop, P.; Gehring, H.; Jansonius, J.N.; Christen, P. J Biol Chem 1999, 274, 31203.
45. Yano, T.; Kuramitsu, S.; Tanase, S.; Morino, Y.; Kagamiyama, H. Biochemistry 1992, 32, 1810.
46. Oue, S.; Okamoto, A.; Yano, T.; Kagamiyama, H. J Biol Chem 1999, 274, 2344.
47. Gramatikova, S.; Christen, P. J Biol Chem 1996, 271, 30583.
48. Gramatikova, S.; Christen, P. J Biol Chem 1997, 272, 9779.
49. Mahon, M.M.; Gramatikova, S.I.; Christen, P.; Fitzpatrick, T.B.; '' Malthouse, J.P.G. FEES Lett 1998, 427, 74.
50. Riley, W.O.; Snell, E.E. Biochemistry 1968, 7, 3520.
51. Rosenthalcr, J.; Guirard, B.M.; Chang, G.W.; Snell, E.E. Proc Natl Acad Sci USA 1965, 54, 152.
52. Hofmeister, A.E.; Berger, S.; Buckel, W. Eur J Biochem 1992, 205, 743.
53. Grabowski, R.; Hofmeister, A.E.; Buckel, W. Trends Biochem .Sci 1993, 18, 297.
54. Williamson, J.M.; Brown, G.M. J Biol Chem 1979, 254, 8074.
55. Lamont, H.C.; Staudenbauer, W.L.; Strominger, J.L. J Biol Chem 1972, 247, 5103.
56. Yamauchi, T.; Choi, S. Y.; Okada, H.; Yohda, M.; Kumagai, H.; Esaki, H.; Soda, K. J Biol Chem 1992, 267, 18361.
57. Gallo, K. A.; Knowles, J. R. Biochemistry 1993, 32, 3981.
58. Gallagher, T.; Snell, E.E.; Hacke«, M.L. J Biol Chem 1989, 264, 12737.
59. Vallée, B.L.; Falchuk, K.H. Physiol Rev 1993, 73, 79.
60. Rétey, J. Angew Chem Int Ed Engl 1990, 29, 355.
61. Vacca, R.A.; Giannattasio, S.; Graber, R.; Sandmeier, E.; Marra, E.; Christen, P. J Biol Chem 1997, 272, 21932.
62. Ivanov, V.l.; Karpeisky, M.Ya. Adv Enzymol 1969, 32, 21.
63. Gehring, H.; Christen, P. J Biol Chem 1978, 253, 3158.
64. Pfister, K.; Sandmeier, E.; Berchtold, W.; Christen, P. J Biol Chem 1985, 260, 11414.