Computer analysis of regulatory signals in bacterial genomes. Fnr binding sites

Molecular Biology

Volumn 35, Issue 6, 2001, Pages 853-861

  Gerasimova, A V ^a   Rodionov, D A ^a   Mironov, A A ^a   Gelfand, M S ^a  

^a Stt Res Ctr for Biotech G   (Russian Federation)

Author keywords

Aerobic anaerobic regulation; Computer analysis; Escherichia coli; Fnr

Indexed keywords

BACTERIA (MICROORGANISMS); ESCHERICHIA COLI; GAMMAPROTEOBACTERIA;

EID: 0035497845     PISSN: 00268933     EISSN: None     Source Type: Journal    
DOI: 10.1023/A:1013286202014     Document Type: Article

References (18)

1. 1. Bauer, C.E., Elsen, S., and Bird, T.H, Annu. Rev. Microbiol., 1999, vol. 53, pp. 495-523.
2. 2. Lynch, A.S. and Lin, E.C.C., Escherichia coli and Salmonella. Cellular and Molecular Biology, Neindhard, F.C., Ed., Washington DC: ASM Press, 1996, pp. 1526-1538.
3. 3. Blattner, F.R., Plunkett, G., Bloch, C.A., et al., Science, 1997, vol. 77, pp. 1453-1474.
4. 4. Fleischmann, R.D., Adams, M.D., White, O., et al., Science, 1995, vol. 269, pp. 496-512.
5. 5. Heidelberg, J.F., Eisen, J.A., Nelson, W.C., et al., Nature, 2000, vol. 406, pp. 477-483.
6. 6. Stolver, C.K., Pham, X.Q., Erwin, A.L., et al., Nature, 2000, vol. 406, pp. 959-964.
7. 7. Benson, D.A., Karsch-Mizrachi, I., Lipman, D.J., et al., Nucleic Acids Res., 2000, vol. 28, pp. 15-18.
8. 8. Mironov, A.A., Vinokurova, N.P., and Gelfand, M.S., Mol. Biol., 2000, vol. 34, pp. 222-231.
9. 9. Robison, K. and Church, G., J. Mol. Biol., 1998, vol. 284, pp. 241-254.
10. 10. Altschul, S.F., Madden, T.L., Schaffer, A.A., et al., Nucleic Acids Res., 1997, vol. 25, pp. 3389-3402.
11. 11. Bairoch, A. and Apweiler, R., Nucleic Acids Res., 2000, vol. 28, pp. 45-48.
12. 12. Florea, L., Riemer, C., Schwartz, S., et al., Nucleic Acids Res., 2000, vol. 28, pp. 3486-3496.
13. 13. Green, J., Irvine, A.S., Meng, W., and Guest, J.R., Mol. Microbiol., 1996, vol. 19, pp. 125-137.
14. 14. Mironov, A.A. and Gelfand, M.S., Mol. Biol., 1999, vol. 33, pp. 127-132.
15. 15. Gelfand, M.S., Novichkov, P.S., Novichkova, E.S., and Mironov, A.A., Briefings in Bioinformatics, 2000, vol. 1, pp. 357-371.
16. 16. Chattopadhyay, S., Wu, Y., and Datta, P., J. Bacteriol., 1997, vol. 179, pp. 4868-4873.
17. 17. Ramseier, T.M. and Saier, M.H., Microbiology, 1995, vol. 141, pp. 1901-1907.
18. 18. Pellicer, M.T., Lynch, A.S., De Wulf, P., et al., Mol. Gen. Genet., 1999, vol. 261, pp. 170-176.