marY2N, a LINE-like non-long terminal repeat (Non-LTR) retroelement from the ectomycorrhizal homobasidiomycete Tricholoma matsutake

Bioscience, Biotechnology and Biochemistry

Volumn 65, Issue 10, 2001, Pages 2301-2305

  Murata, Hitoshi ^a   Miyazaki, Yasumasa ^a   Yamada, Akiyoshi ^b  

^a FORESTRY AND FOREST PRODUCTS RESEARCH INSTITUTE   (Japan)

^b SHINSHU UNIVERSITY   (Japan)

Author keywords

Ectomycorrhizal fungi; Homobasidiomycetes; LINE like non LTR retroelement; Tricholoma matsutake

Indexed keywords

DROSOPHILA MELANOGASTER; FUNGI; HOMOBASIDIOMYCETES; TRICHOLOMA MAGNIVELARE; TRICHOLOMA MATSUTAKE;

FUNGAL DNA;

ARTICLE; BASIDIOMYCETES; CHEMISTRY; GENETICS; LONG INTERSPERSED REPEAT; LONG TERMINAL REPEAT; MOLECULAR CLONING; MOLECULAR GENETICS; NUCLEIC ACID HYBRIDIZATION; NUCLEOTIDE SEQUENCE; OPEN READING FRAME; SOUTHERN BLOTTING;

BASE SEQUENCE; BASIDIOMYCOTA; BLOTTING, SOUTHERN; CLONING, MOLECULAR; DNA, FUNGAL; LONG INTERSPERSED NUCLEOTIDE ELEMENTS; MOLECULAR SEQUENCE DATA; NUCLEIC ACID HYBRIDIZATION; OPEN READING FRAMES; SUPPORT, NON-U.S. GOV'T; TERMINAL REPEAT SEQUENCES;

EID: 0035488587     PISSN: 09168451     EISSN: None     Source Type: Journal    
DOI: 10.1271/bbb.65.2301     Document Type: Article

References (20)

1. Hutchison, C. A., III, Hardies, S. C., Loeb, D. D., Ronald Shehee, W., and Edgell, M. H., LINEs and related retroposons: long interspersed repeated sequences in the eukayotic genome, In "Mobile DNA", eds. Berg, D. E. and Howe, M. M., American Society for Microbiology, Washington DC, pp. 593-617 (1989).
2. Burwinkel, B. and Kilimann, M. W., Unequal homologous recombination between LINE-1 elements as a mutational mechanism in human genetic disease. J. Mol. Biol., 277, 513-517 (1998).
3. Esnault, C., Maestre, J., and Heidmann, T., Human LINE retrotransposons generate processed pseudogenes. Nat. Genet., 24, 363-367 (2000).
4. Finnegan, D. J., The I factor and I-R hybrid dysgenesis in Drosophila melanogaster, In "Mobile DNA", eds. Berg, D. E. and Howe, M. M., American Society for Microbiology, Washington DC, pp. 503-517 (1989).
5. Finnegan, D. J., F and related elements in in Drosophila melanogaster, In "Mobile DNA", eds. Berg, D. E. and Howe, M. M., American Society for Microbiology, Washington DC, pp. 519-521 (1989).
6. Kazazian, H. H. and Moran J. V., The impact of L1 retrotransposons on the human genome. Nat. Genet., 19, 19-24 (1998).
7. McDonald, J. F., Evolution and consequences of transposable elements. Curr. Opin. Genet. Dev., 3, 855-864 (1993).
8. Mizrokhi, L. J. and Mazo, A. M., Evidence for horizontal transmission of the mobile element jockey between distant Drosophila species. Proc. Natl. Acad. Sci. USA, 87, 9216-9220 (1990).
9. Nishimura, M., Hayashi, N., Jwa, N.-S., Lau, G. W., Hamer, J. E., and Hasebe, A., Insertion of the LINE retrotransposon MGL causes a conidiophore pattern mutation in Magnaporthe grisea. Mol. Plant-Microbe Interact., 13, 892-894 (2000).
10. Cambareri, E. B., Helber, J., and Kinsey, J. A., Tad1-1, an active LINE-like element of Neurospora crassa. Mol. Gen. Genet., 242, 658-665 (1994).
11. Goodwin, T. J. D., Ormandy, J. E., and Poulter, R. T. M., L1-like non-LTR retrotransposons in the yeast Candida albicans. Curr. Genet., 39, 83-91 (2001).
12. Goyon, C., Rossignol, J.-L., and Faugeron, G., Native DNA repeats and methylation in Ascobolus. Nucleic Acids Res., 24, 3348-3356 (1996).
13. He, C., Nourse, J. P., Kelemu, S., Irwin, J. A. G., and Manners, J. M., CgT1: a non-LTR retrotransposon with restricted distribution in the fungal phytopathogen Colletotrichum gloeosporioides. Mol. Gen. Genet., 252, 320-331 (1996).
14. Hosford, D., Pilz, D., Molina, R., and Amaranthus, M., Ecology and management of the commercially harvested American matsutake mushroom, USDA Forest Service PNW-GTR-412. USDA, Washington D.C., pp. 1-68 (1997).
15. Murata, H. and Yamada, A., marY1, a member of the gypsy group of long terminal repeat retroelements from the ectomycorrhizal basidiomycete Tricholoma matsutake. Appl. Environ. Microbiol., 66, 3642-3645 (2000).
16. Murata, H. and Yamada, A., Amplification and cloning of putative reverse transcriptase genes from Tricholoma spp. by polymerase chain reaction. Mycoscience 42, 395-398 (2001).
17. Thompson, J. D., Gibson, T. J., Plewniak, F., Jeanmougin, F., and Higgins, D. G., The Clustal X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res., 25, 4876-4882 (1997).
18. Xiong, Y. and Eickbush, T. H., The site-specific ribosomal DNA insertion element R1Bm belongs to a class of non-long-terminal-repeat retrotransposons. Mol. Cell. Biol., 8, 114-123 (1988).
19. Di Nocera, P. P. and Casari, G., Related polypeptides are encoded by Drosophila F elements, I factors, and mammalian L1 sequences. Proc. Natl. Acad. Sci. USA., 84, 5843-5847 (1987).
20. Nies, D. H., Nies, A., Chu, L., and Silver, S., Expression and nucleotide sequence of a plasmid-determined divalent cation efflux system from Alcaligenes eutrophus. Proc. Natl. Acad. Sci. USA, 86, 7351-7355 (1989).