Highly expressed and alien genes of the Synechocystis genome

Nucleic Acids Research

Volumn 29, Issue 7, 2001, Pages 1590-1601

  Mrázek, Jan ^a   Bhaya, Devaki ^b   Grossman, Arthur R ^b   Karlin, Samuel ^a  

^a STANFORD UNIVERSITY   (United States)

^b GEOPHYSICAL LABORATORY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL PROTEIN; CARBON DIOXIDE; CHAPERONE; GLYCOLYTIC ENZYME; LIPOPOLYSACCHARIDE; POLYPEPTIDE; PROTEIN SUBUNIT; RIBOSOME PROTEIN; TRANSCRIPTION FACTOR; TRANSPOSASE;

ARTICLE; BACTERIAL GENE; CARBON DIOXIDE FIXATION; CITRIC ACID CYCLE; CODON; CONTROLLED STUDY; CYANOBACTERIUM; FREQUENCY ANALYSIS; GENE CLUSTER; GENE EXPRESSION; GENE FREQUENCY; GENETIC ANALYSIS; GENETIC CODE; GLYCOLYSIS; NONHUMAN; OPERON; PHOTOSYNTHESIS; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN DEGRADATION; PROTEIN SYNTHESIS; STOICHIOMETRY;

BACTERIA (MICROORGANISMS); NEGIBACTERIA; PROKARYOTA; SYNECHOCYSTIS;

EID: 0035312272     PISSN: 03051048     EISSN: None     Source Type: Journal    
DOI: 10.1093/nar/29.7.1590     Document Type: Article

References (34)

1. Evolution of organelles and eukaryotic genomes
2. Supramolecular membrane organization
3. Light harvesting complexes in oxygenic photosynthesis: Diversity, control and evolution
4. Predicted highly expressed genes of diverse prokaryotic genomes
5. Correlation between the abundance of Escherichia coli transfer RNAs and the occurrence of the respective codons in its protein genes: A proposal for a synonymous codon choice that is optimal for the E. coli translational system
6. Codon preferences in free-living microorganisms
7. Codon usage and genome evolution
8. What drives codon choices in human genes?
9. Comparative DNA analysis across diverse genomes
10. Ribosome-mediated translational pause and protein domain organization
11. Asymmetric substitution patterns in the two DNA strands of bacteria
12. Strand compositional asymmetry in bacterial and large viral genomes
13. Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions
14. Crystal structure of S-adenosylmethionine synthetase
15. Functional complementation of an Escherichia coli gap mutant supports an amphibolic role for NAD(P)-dependent glyceraldehyde-3-phospahate dehydrogenase of Synechocystis sp. strain PCC 6803
16. The incomplete tricarboxylic acid cycle in the blue-green alga Anabaena variabilis
17. Biochemical basis of obligate autotrophy in blue-green algae and thiobacilli
18. Genetic evidence of a major role for glucose-6-phosphate dehydrogenase in nitrogen fixation and dark growth of the cyanobacterium Nostoc sp. strain ATCC29133
19. Detecting alien genes in bacterial genomes
20. Chance and statistical significance in protein and DNA sequence analysis
21. Amelioration of bacterial genomes: Rates of change and exchange
22. The structure of a 'simple' phycobilisome
23. Phycobilisomes: Structure and dynamics
24. Synonymous codon bias is related to gene length in Escherichia coli: Election for translational accuracy
25. Differential expression of the psbA genes in the cyanobacterium Synechocystis-6803
26. Activation of the silent psbAl gene in the cyanobacterium Synechocystis sp. strain 6803 produces a novel and functional D1 protein
27. Crystal structure of the breakage-reunion domain of DNA gyrase
28. Singular over-representation of an octameric palindrome, HIP1, in DNA from many cyanobacteria
29. Frequent oligonucleotides and peptides of the Haemophilus influenzae genome
30. Isolation of regulated genes in the cyanobacterium Synechocystis PCC6803 by differential display
31. Selfish DNAs with self-restraint
32. Insertion sequences
33. The codon adaptation index-a measure of directional synonymous codon usage bias and its potential applications
34. Codon usages in different gene classes of the Escherichia coli genome