A high-resolution integrated map spanning the SDHD gene at 11q23: A 1.1-Mb BAC contig, a partial transcript map and 15 new repeat polymorphisms in a tumour-suppressor region

European Journal of Human Genetics

Volumn 9, Issue 2, 2001, Pages 121-129

  Baysal, Bora E ^a   Willett Brozick, Joan E ^a   Taschner, Peter E M ^b   Dauwerse, J G ^b   Devilee, Peter ^b   Devlin, B ^a  

^a UNIVERSITY OF PITTSBURGH SCHOOL OF MEDICINE   (United States)

^b LEIDEN UNIVERSITY MEDICAL CENTER   (Netherlands)

Author keywords

Chromosomal band 11q23; Hereditary paraganglioma; Imprinting; LOH; Physical map

Indexed keywords

CONTIG; CYCLOPHILIN; CYTOCHROME B; INTERLEUKIN 18; ISOPROTEIN; OCTAMER BINDING TRANSCRIPTION FACTOR 1; PHOSPHOPROTEIN PHOSPHATASE 2A; PROTEIN SERINE THREONINE KINASE; SUCCINATE DEHYDROGENASE (UBIQUINONE); TRANSCRIPTION FACTOR; UNCLASSIFIED DRUG;

ARTICLE; BACTERIAL ARTIFICIAL CHROMOSOME; BETA CHAIN; BLADDER CARCINOMA; BREAST TUMOR; CHROMOSOME 11Q; CHROMOSOME DELETION; CHROMOSOME MAP; CHROMOSOME POLYMORPHISM; DYSTONIA; ENZYME SUBUNIT; EXPRESSED SEQUENCE TAG; GENE MUTATION; GENE TARGETING; GENETIC CODE; GENETIC TRANSCRIPTION; GERM LINE; HEARING IMPAIRMENT; HUMAN; MELANOMA; MOLECULAR CLONING; NUCLEOTIDE SEQUENCE; OVARY TUMOR; PARAGANGLIOMA; PRIORITY JOURNAL; PSEUDOGENE; SEQUENCE TAGGED SITE; SOLID TUMOR; STOMACH TUMOR; TANDEM REPEAT; TUMOR SUPPRESSOR GENE; UTERINE CERVIX TUMOR; X CHROMOSOME LINKED DISORDER; YEAST ARTIFICIAL CHROMOSOME;

BACTERIA (MICROORGANISMS);

EID: 0035131433     PISSN: 10184813     EISSN: None     Source Type: Journal    
DOI: 10.1038/sj.ejhg.5200585     Document Type: Article

References (35)

1. Chromosome 11q and cancer: A review
2. A single ataxia telangiectasia gene with a product similar to PI-3 kianse
3. The ataxia telangiectasia gene in familial and sporadic cancer
4. Alterations of the PPP2R1B gene in human lung and colon cancer
5. Low frequency of alterations of the alpha (PPP2R1A) and beta (PPP2R1B) isoforms of the subunit A of the serine-threonine phosphatase 2A in human neoplasms
6. Absence of PPP2R1B gene alterations in primary ovarian cancers
7. Cytochrome b in human complex II (succinate-ubiquinone oxidoreductase): cDNA cloning of the components in liver mitochondria and chromosome assignment of the genes for the large (SDHC) and small (SDHD) subunits to 1q21 and 11q23
8. Characterization of the human SDHD gene encoding the small subunit of cytochrome b (cybS) in mitochondrial succinate-ubiquinone oxidoreductase
9. Mutations in SDHD, a mitochondrial complex II gene, in hereditary paraganglioma
10. Genomic imprinting in hereditary glomus tumours: Evidence for new genetic theory
11. Hypoxia-mediated selection of cells with diminished apoptotic potential in solid tumours
12. A high-resolution STS, EST, and gene-based physical map of the hereditary paraganglioma region on chromosome 11q23
13. A high-resolution physical map of human chromosome 11
14. Genomic organization and precise physical location of protein phosphatase 2A regulatory subunit A beta isoform gene on chromosome band 11q23
15. Rapid subchromosomal localization of cosmids by nonradioactive in situ hybridization
16. Extensive cross-homology between the long and the short arm of chromosome 16 may explain leukemic inversions and translocations
17. Closing in on the Rieger syndrome gene on 4q25: Mapping translocation breakpoints within a 50-kb region
18. Basic local alignment search tool
19. Repositioning the hereditary paraganglioma critical region on chromosome band 11q23
20. OBF-1, a novel B cell-specific coactivator that stimulates immunoglobulin promoter activity through association with octamer-binding proteins
21. A yeast artificial chromosome contig and NotI restriction map that spans the tumour suppressor gene(s) locus, 11q22.2-q23.3
22. Assignment of the human gene for Oct-binding factor-1 (OBF1), a B-cell-specific coactivator of octamer-binding transcription factors 1 and 2, to 11q23.1 by somatic cell hybridization and in situ hybridization
23. The human interleukin 18 gene IL18 maps to 11q22.2-q22.3, closely linked to the DRD2 gene locus and distinct from mapped IDDM loci
24. The 20kD protein of human [U4/U6.U5] tri-snRNPs is a novel cyclophilin that forms a complex with the U4/U6-specific 60kD and 90kD proteins
25. A new cyclophilin and the human homologues of yeast Prp3 and Prp4 form a complex associated with U4/U6 snRNPs
26. Molecular cytogenetic delineation of a novel critical genomic region in chromosome bands 11q22.3-q23.1 in lymphoproliferative disorders
27. An X chromosome-linked gene encoding a protein with characteristics of a rhoGAP predominantly expressed in hematopoietic cells
28. Prediction of the coding sequences of unidentified human genes. XI. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro
29. Use of restriction enzymes to detect potential gene sequences in mammalian DNA
30. Point mutations in AAUAAA and the poly (A) addition site: Effects on the accuracy and efficiency of cleavage and polyadenylation in vitro
31. Endogenous retrovirus provide the primary polyadenylation signal for the two new human genes (HHLA2 and HHLA3)
32. Refinement of the LOH region 1 at 11q23.1 deleted in human breast carcinomas and sublocalization of 11 expressed sequence tags within the refined region
33. Localization of Jacobsen syndrome breakpoints on a 40-Mb physical map of distal chromosome 11q
34. Cloning and DNA sequencing of a t(9;11) translocation region associated with bipolar disorder
35. Identification and characterization of the gene encoding a new member of the alpha-crystallin/small hsp family, closely linked to the alphaB-crystallin gene in a head-to-head manner