Development and characterisation of simple sequence repeat (SSR) markers for white clover (Trifolium repens L.)

Theoretical and Applied Genetics

Volumn 102, Issue 2-3, 2001, Pages 416-424

  Kolliker R ^a   Jones, E S ^a   Drayton, M C ^a   Dupal, M P ^a   Forster, J W ^a  

^a LA TROBE UNIVERSITY   (Australia)

Author keywords

Cross species amplification; Molecular marker; Simple sequence repeats; SSR enriched libraries; Trifolium repens

Indexed keywords

CLONE; DINUCLEOTIDE REPEAT; GENE LIBRARY; GENE SEGREGATION; GENE TAGGING; GENETIC POLYMORPHISM; GENETIC REGULATION; PLANT BREEDING; QUANTITATIVE TRAIT LOCUS; SEQUENCE ANALYSIS; SIMPLE SEQUENCE REPEAT; TRINUCLEOTIDE REPEAT;

EMBRYOPHYTA; TRIFOLIUM; TRIFOLIUM REPENS;

EID: 0035090478     PISSN: 00405752     EISSN: None     Source Type: Journal    
DOI: 10.1007/s001220051662     Document Type: Article

References (46)

1. AFLP fingerprinting in Medicago spp.: Its development and application in linkage mapping
2. A high-density molecular map for ryegrass (Lolium perenne) using AFLP markers
3. Microsatellite evolution: Polarity of substitutions within repeats and neutrality of flanking sequences
4. A molecular marker linkage map of tetraploid alfalfa (Medicago sativa L.)
5. Development and application of simple sequence repeat (SSR) loci for plant genome analysis
6. Comparative RFLP mapping of meadow and tall fescue
7. A rapid DNA isolation procedure for small quantities of fresh leaf tissue
8. Microsatellite libraries enriched for several microsatellite sequences in plants
9. Allozyme markers suitable for pasture persistence studies in cocksfoot (Dactylis glomerata) cv Grasslands Wana
10. Microprep protocol for extraction of DNA from tomato and other herbaceous plants
11. Simple sequence repeats for the genetic analysis of apple
12. Cloned microsatellite repeats differ between 4-base restriction endonucleases
13. Universal linker and ligation procedures for construction of genomic DNA libraries enriched for microsatellites
14. Genetic analysis of Lolium. I. Identification of linkage groups and the establishment of a genetic map
15. Genetic markers and the selection of quantitative traits in forage grasses
16. Insight on segregation distortions in two intraspecific crosses between annual species of Medicago (Leguminosae)
17. Relationships between genetic distance measured by RAPD-PCR and heterosis in inbred lines of white clover (Trifolium repens L.)
18. Construction of random small-insert genomic libraries highly enriched for simple sequence repeats
19. Relationships among genetic distance, forage yield and heterozygosity in isogenic diploid and tetraploid alfalfa populations
20. Enrichment of microsatellites from the citrus genome using biotinylated oligonucleotide sequences bound to streptavidin-coated magnetic particles
21. Assessing the abundance and polymorphism of simple sequence repeats in perennial ryegrass
22. DNA markers in plant improvement: An overview
23. Characterization and analysis of simple sequence repeat (SSR) loci in seashore paspalum (Paspalum vaginatum Swartz)
24. Trends in the global marketing of white clover cultivars
25. Self-compatibility and heterosis in white clover (Trifolium repens L.)
26. Genome mapping, molecular markers and marker-assisted selection in crop plants
27. PCR-amplified microsatellites as markers in plants
28. Cross-species amplification of soybean (Glycine max) simple sequence repeats (SSRs) within the genus and other legume genera - Implications for the transferability of SSRs in plants
29. The comparison of RFLP, RAPD, AFLP and SSR (microsatellite) markers for germplasm analysis
30. Generating and using DNA markers in plants
31. Abundance and polymorphism of microsatellite markers in the tea tree (Melaleuca alternifolia, Myrtaceae)
32. Development of simple sequence repeat markers in rye (Secale cereale L.)
33. Use of short microsatellites from database sequences to generate polymorphism among Lycopersicon esculentum cultivars and accessions of other Lycopersicon species
34. Genetic markers, map construction, and their application in plant breeding
35. RAPD characterization of Poa annua L. populations in golf course greens and fairways
36. Identification of polymorphic, conserved simple sequence repeats (SSRs) in cultivated Brassica species
37. Hypervariability of simple sequences as a general source for polymorphic DNA markers
38. The death of a microsatellite: A phylogenetic perspective on microsatellite interruptions
39. CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
40. Survey of plant short tandem DNA repeats
41. Human DNA polymorphism based on length variations in simple-sequence tandem repeats
42. Microsatellite markers for molecular breeding
43. Genetics and breeding
44. Genetic improvement in white clover representing six decades of plant breeding