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Volumn 52, Issue 1, 2001, Pages 34-46

Gene-environment interaction and affected sib pair linkage analysis

Author keywords

Environment; Interaction; Linkage; Power; Sib pairs

Indexed keywords

ALLELE; ARTICLE; ENVIRONMENTAL FACTOR; GENETIC ANALYSIS; GENETIC LINKAGE; GENETIC RISK; HUMAN; METHODOLOGY; MODEL; QUANTITATIVE GENETICS; QUANTITATIVE TRAIT;

EID: 0035018848     PISSN: 00015652     EISSN: None     Source Type: Journal    
DOI: 10.1159/000053352     Document Type: Article
Times cited : (30)

References (46)
  • 1
    • 0025938214 scopus 로고
    • Genetic susceptibility of squamous cell carcinoma of the lung in relation to cigarette smoking dose
    • Nakachi K, Imai K, Hayashi S, Watanabe J, Kawajiri K: Genetic susceptibility of squamous cell carcinoma of the lung in relation to cigarette smoking dose. Cancer Res 1991;51:5177-5189.
    • (1991) Cancer Res , vol.51 , pp. 5177-5189
    • Nakachi, K.1    Imai, K.2    Hayashi, S.3    Watanabe, J.4    Kawajiri, K.5
  • 2
    • 0027304210 scopus 로고
    • Polymorphisms of the CYP1A1 and glutathione S-transferase genes associated with susceptibility to lung cancer in relation to cigarette dose in the Japanese population
    • Nakachi K, Imai K, Hayashi S. Kawajiri K: Polymorphisms of the CYP1A1 and glutathione S-transferase genes associated with susceptibility to lung cancer in relation to cigarette dose in the Japanese population. Cancer Res 1993;53:2994-2999.
    • (1993) Cancer Res , vol.53 , pp. 2994-2999
    • Nakachi, K.1    Imai, K.2    Hayashi, S.3    Kawajiri, K.4
  • 4
    • 0028967509 scopus 로고
    • Genetic factors in individual responses to environmental exposures
    • Hirvonen A: Genetic factors in individual responses to environmental exposures. J Occup Environ Med 1995;37:37-43.
    • (1995) J Occup Environ Med , vol.37 , pp. 37-43
    • Hirvonen, A.1
  • 5
    • 0028877387 scopus 로고
    • Risk of cigarette smoking for squamous and small cell carcinomas of the lung modulated by combinations of CYP1A1 and GSTM1 gene polymorphisms in a Japanese population
    • Kihara M, Kihara M, Noda K: Risk of cigarette smoking for squamous and small cell carcinomas of the lung modulated by combinations of CYP1A1 and GSTM1 gene polymorphisms in a Japanese population. Carcinogenesis 1995; 16:2331-2336.
    • (1995) Carcinogenesis , vol.16 , pp. 2331-2336
    • Kihara, M.1    Kihara, M.2    Noda, K.3
  • 6
    • 0028826557 scopus 로고
    • Lung cancer risk in African Americans in relation to race-specific CYP1A1 polymorphisms
    • London S, Daly A, Fairbrother K, et al: Lung cancer risk in African Americans in relation to race-specific CYP1A1 polymorphisms. Cancer Res 1995;55:6035-6037.
    • (1995) Cancer Res , vol.55 , pp. 6035-6037
    • London, S.1    Daly, A.2    Fairbrother, K.3
  • 7
    • 0030954460 scopus 로고    scopus 로고
    • Hierarchical modeling of gene-environment interactions: Estimating NAT2* genotype-specific dietary effects on adenomatous polyps
    • Aragaki C, Greenland S, Probst-Hensch N, Haile R: Hierarchical modeling of gene-environment interactions: Estimating NAT2* genotype-specific dietary effects on adenomatous polyps. Cancer Epidemiol Biomarkers Prevent 1997;6:307-314.
    • (1997) Cancer Epidemiol Biomarkers Prevent , vol.6 , pp. 307-314
    • Aragaki, C.1    Greenland, S.2    Probst-Hensch, N.3    Haile, R.4
  • 8
    • 0030865837 scopus 로고    scopus 로고
    • Is oral contraceptive use more common in women with BRCA1/BRCA2 mutations than in other women with breast cancer?
    • Ursin G, Henderson B, Haile R, Zhou N, Diep A, Bernstein L: Is oral contraceptive use more common in women with BRCA1/BRCA2 mutations than in other women with breast cancer? Cancer Res 1997; 57 3678-3681.
    • (1997) Cancer Res , vol.57 , pp. 3678-3681
    • Ursin, G.1    Henderson, B.2    Haile, R.3    Zhou, N.4    Diep, A.5    Bernstein, L.6
  • 9
    • 0021179724 scopus 로고
    • Magnified risks from cigarette smoking for coronary prone families in Utah
    • Hopkins P, Williams R, Hunt S: Magnified risks from cigarette smoking for coronary prone families in Utah. West J Med 1984;141: 196-202.
    • (1984) West J Med , vol.141 , pp. 196-202
    • Hopkins, P.1    Williams, R.2    Hunt, S.3
  • 10
    • 0030773713 scopus 로고    scopus 로고
    • Detection of gene-environment interactions in joint segregation and linkage analysis
    • Gauderman W, Faucett C: Detection of gene-environment interactions in joint segregation and linkage analysis. Am J Hum Genet 1997; 61:1189-1199.
    • (1997) Am J Hum Genet , vol.61 , pp. 1189-1199
    • Gauderman, W.1    Faucett, C.2
  • 12
    • 0030296970 scopus 로고    scopus 로고
    • Gene-environment interaction: Definitions and study designs
    • Ottman R: Gene-environment interaction: Definitions and study designs. Prevent Med 1996;25:764-770.
    • (1996) Prevent Med , vol.25 , pp. 764-770
    • Ottman, R.1
  • 13
    • 0027738047 scopus 로고
    • Effect of ignoring genotype-environment interaction on segregation analysis of quantitative traits
    • Tiret L, Abel L, Rakotovao R: Effect of ignoring genotype-environment interaction on segregation analysis of quantitative traits. Gen Epidemiol 1993;10:581-586.
    • (1993) Gen Epidemiol , vol.10 , pp. 581-586
    • Tiret, L.1    Abel, L.2    Rakotovao, R.3
  • 14
    • 0021744502 scopus 로고
    • The resolution of genotype × environment interaction in segregation analysis of nuclear families
    • Eaves L: The resolution of genotype × environment interaction in segregation analysis of nuclear families. Genet Epidemiol 1984;1: 215-228.
    • (1984) Genet Epidemiol , vol.1 , pp. 215-228
    • Eaves, L.1
  • 15
    • 0032443744 scopus 로고    scopus 로고
    • Epidemiologic and genetic approaches in the study of gene-environment interaction: An overview of available methods
    • Andrieu N, Goldstein A: Epidemiologic and genetic approaches in the study of gene-environment interaction: An overview of available methods. Epidemiol Rev 1998;20:137-147.
    • (1998) Epidemiol Rev , vol.20 , pp. 137-147
    • Andrieu, N.1    Goldstein, A.2
  • 17
    • 0018182062 scopus 로고
    • The affected sib pair IBD distribution for HLA-linked disease susceptibility genes
    • Suarez B: The affected sib pair IBD distribution for HLA-linked disease susceptibility genes. Tissue Antigens 1978;12:87-93.
    • (1978) Tissue Antigens , vol.12 , pp. 87-93
    • Suarez, B.1
  • 18
    • 0032969483 scopus 로고    scopus 로고
    • Optimal allele-sharing statistics for genetic mapping using affected relatives
    • McPeek M: Optimal allele-sharing statistics for genetic mapping using affected relatives. Genet Epidemiol 1999;16:225-249.
    • (1999) Genet Epidemiol , vol.16 , pp. 225-249
    • McPeek, M.1
  • 19
    • 0021957675 scopus 로고
    • A comparison of sib-pair linkage tests for disease susceptibility loci
    • Blackwelder W, Elston R: A comparison of sib-pair linkage tests for disease susceptibility loci. Genet Epidemiol 1985;2:85-97.
    • (1985) Genet Epidemiol , vol.2 , pp. 85-97
    • Blackwelder, W.1    Elston, R.2
  • 20
    • 0031815057 scopus 로고    scopus 로고
    • Comparison of four sib-pair linkage methods for analyzing sibships with more than two affecteds: Interest in the binomial maximum likelihood approach
    • Abel L, Alcais A, Mallet A: Comparison of four sib-pair linkage methods for analyzing sibships with more than two affecteds: Interest in the binomial maximum likelihood approach. Genet Epidemiol 1998;15:371-390.
    • (1998) Genet Epidemiol , vol.15 , pp. 371-390
    • Abel, L.1    Alcais, A.2    Mallet, A.3
  • 21
    • 0025019555 scopus 로고
    • Linkage strategies for genetically complex traits. I. Multilocus models
    • Risch N: Linkage strategies for genetically complex traits. I. Multilocus models. Am J Hum Genet 1990;46:222-228.
    • (1990) Am J Hum Genet , vol.46 , pp. 222-228
    • Risch, N.1
  • 22
    • 0021340890 scopus 로고
    • A comparison of three affected sib-pair scoring methods to detect HLA-linked disease susceptibility genes
    • Suarez B, Van Eerdewegh P: A comparison of three affected sib-pair scoring methods to detect HLA-linked disease susceptibility genes. Am J Med Genetics 1984;18:135-146.
    • (1984) Am J Med Genetics , vol.18 , pp. 135-146
    • Suarez, B.1    Van Eerdewegh, P.2
  • 23
    • 0027494638 scopus 로고
    • Some developments on the affected-pedigree-member method of linkage analysis
    • Ward P: Some developments on the affected-pedigree-member method of linkage analysis. Am J Hum Genet 1993;52:1200-1215.
    • (1993) Am J Hum Genet , vol.52 , pp. 1200-1215
    • Ward, P.1
  • 24
    • 0030873885 scopus 로고    scopus 로고
    • A linkage strategy for detection of human quantitative-trait loci. II. Optimization of study designs based on extreme sib pairs and generalized relative risk ratios
    • Gu C, Rao DC: A linkage strategy for detection of human quantitative-trait loci. II. Optimization of study designs based on extreme sib pairs and generalized relative risk ratios. Am J Hum Genet 1997;61:211-222.
    • (1997) Am J Hum Genet , vol.61 , pp. 211-222
    • Gu, C.1    Rao, D.C.2
  • 25
    • 0025008677 scopus 로고
    • Linkage strategies for genetically complex traits. II. The power of affected relative pairs
    • Risch N: Linkage strategies for genetically complex traits. II. The power of affected relative pairs. Am J Hum Genet 1990;46:229-241.
    • (1990) Am J Hum Genet , vol.46 , pp. 229-241
    • Risch, N.1
  • 26
    • 0028301661 scopus 로고
    • A class of tests for linkage using affected pedigree members
    • Whittemore A, Halpern J: A class of tests for linkage using affected pedigree members. Biometrics 1994;50:118-127.
    • (1994) Biometrics , vol.50 , pp. 118-127
    • Whittemore, A.1    Halpern, J.2
  • 27
    • 0026510552 scopus 로고
    • A multilocus extension of the affected-pedigree-member method of linkage analysis
    • Weeks D, Lange K: A multilocus extension of the affected-pedigree-member method of linkage analysis. Am J Hum Genet 1992;50:859-868.
    • (1992) Am J Hum Genet , vol.50 , pp. 859-868
    • Weeks, D.1    Lange, K.2
  • 28
    • 0029046177 scopus 로고
    • Complete multipoint sib-pair analysis of qualitative and quantitative traits
    • Krugylak L, Lander E: Complete multipoint sib-pair analysis of qualitative and quantitative traits. Am J Hum Genet 1995;57:439-454.
    • (1995) Am J Hum Genet , vol.57 , pp. 439-454
    • Krugylak, L.1    Lander, E.2
  • 29
    • 0029886532 scopus 로고    scopus 로고
    • Parametric and nonparametric linkage analysis: A unified multipoint approach
    • Kruglyak L, Daly M, Reeve-Daly M, Lander E: Parametric and nonparametric linkage analysis: A unified multipoint approach. Am J Hum Genet 1996;58:1347-1363.
    • (1996) Am J Hum Genet , vol.58 , pp. 1347-1363
    • Kruglyak, L.1    Daly, M.2    Reeve-Daly, M.3    Lander, E.4
  • 30
    • 0031456758 scopus 로고    scopus 로고
    • Incorporation of covariates into genome scanning using sib-pair analysis in bipolar affective disorder
    • Greenwood C, Bull S: Incorporation of covariates into genome scanning using sib-pair analysis in bipolar affective disorder. Genet Epidemiol 1997;14:635-640.
    • (1997) Genet Epidemiol , vol.14 , pp. 635-640
    • Greenwood, C.1    Bull, S.2
  • 31
    • 0033361931 scopus 로고    scopus 로고
    • Analysis of affected sib pairs, with covariates with and without constraints
    • Greenwood C, Bull S: Analysis of affected sib pairs, with covariates with and without constraints. Am J Hum Genet 1999;64:871-885.
    • (1999) Am J Hum Genet , vol.64 , pp. 871-885
    • Greenwood, C.1    Bull, S.2
  • 32
    • 0342390370 scopus 로고    scopus 로고
    • Covariates in linkage analysis (preliminary manuscripts)
    • Arachon
    • Rice J, Roehberg N, Neuman R, et al: Covariates in linkage analysis (preliminary manuscripts). Genetic Analysis Workshop 11, Arachon, 1999, pp 567-571.
    • (1999) Genetic Analysis Workshop , vol.11 , pp. 567-571
    • Rice, J.1    Roehberg, N.2    Neuman, R.3
  • 33
    • 0033362153 scopus 로고    scopus 로고
    • A general conditional-logistic model for affected-relative-pair linkage studies
    • Olson J: A general conditional-logistic model for affected-relative-pair linkage studies. Am J Hum Genet 1999;65:1760-1769.
    • (1999) Am J Hum Genet , vol.65 , pp. 1760-1769
    • Olson, J.1
  • 34
    • 0343695574 scopus 로고    scopus 로고
    • currently beta. Department of Epidemiology and Biostatistics, Case Western Reserve University. Cleveland
    • SAGE, Statistical Analysis for Genetic Epidemiology, GENIBD routine (version 4.0, currently beta). Department of Epidemiology and Biostatistics, Case Western Reserve University. Cleveland, 1999.
    • (1999) GENIBD Routine Version 4.0
  • 35
    • 13044257107 scopus 로고    scopus 로고
    • A joint test of linkage and G × E interaction using affected sib pairs
    • Gauderman W, Morrison J, Siegmund K, Thomas D: A joint test of linkage and G × E interaction using affected sib pairs. Genet Epidemiol 1999;17:S563-S568.
    • (1999) Genet Epidemiol , vol.17
    • Gauderman, W.1    Morrison, J.2    Siegmund, K.3    Thomas, D.4
  • 36
    • 0035220185 scopus 로고    scopus 로고
    • The role of interacting determinants in the localization of genes
    • in press
    • Gauderman W, Thomas D: The role of interacting determinants in the localization of genes. Adv Genet, in press.
    • Adv Genet
    • Gauderman, W.1    Thomas, D.2
  • 37
    • 84907319426 scopus 로고
    • Asymptotic properties of maximum likelihood estimators and likelihood ratio tests under nonstandard conditions
    • Self S, Liang K-Y: Asymptotic properties of maximum likelihood estimators and likelihood ratio tests under nonstandard conditions. J Am Stat Assoc 1987;82:605-610.
    • (1987) J Am Stat Assoc , vol.82 , pp. 605-610
    • Self, S.1    Liang, K.-Y.2
  • 38
    • 0033073397 scopus 로고    scopus 로고
    • Power of association and linkage tests when the disease alleles are unobserved
    • Tu I, Whittemore A: Power of association and linkage tests when the disease alleles are unobserved. Am J Hum Genet 1999;64:641-649.
    • (1999) Am J Hum Genet , vol.64 , pp. 641-649
    • Tu, I.1    Whittemore, A.2
  • 39
    • 0025094785 scopus 로고
    • Epidemiologic approach to gene-environment interaction
    • Ottman R: Epidemiologic approach to gene-environment interaction. Genet Epidemiol 1990;7:177-185.
    • (1990) Genet Epidemiol , vol.7 , pp. 177-185
    • Ottman, R.1
  • 41
    • 0026092912 scopus 로고
    • Genetic analysis of breast cancer in the cancer and steroid hormone study
    • Claus E, Risch N, Thompson W: Genetic analysis of breast cancer in the cancer and steroid hormone study. Am J Hum Genet 1991;48: 232-242.
    • (1991) Am J Hum Genet , vol.48 , pp. 232-242
    • Claus, E.1    Risch, N.2    Thompson, W.3
  • 42
    • 0033911380 scopus 로고    scopus 로고
    • Evidence for age-specific genetic relative risks in lung cancer
    • Gauderman W, Morrison J: Evidence for age-specific genetic relative risks in lung cancer. Am J Epidemiol 2000;151:41-49.
    • (2000) Am J Epidemiol , vol.151 , pp. 41-49
    • Gauderman, W.1    Morrison, J.2
  • 43
    • 0033912327 scopus 로고    scopus 로고
    • Effects of stratification in the analysis of affected-sib-pair data: Benefits and costs
    • Leal S, Ott J: Effects of stratification in the analysis of affected-sib-pair data: Benefits and costs. Am J Hum Genet 2000;66:567-575.
    • (2000) Am J Hum Genet , vol.66 , pp. 567-575
    • Leal, S.1    Ott, J.2
  • 44
    • 0031971653 scopus 로고    scopus 로고
    • Simple, robust linkage tests for affected sibs
    • Whittemore A, Tu I: Simple, robust linkage tests for affected sibs. Am J Hum Genet 1998; 62:1228-1242.
    • (1998) Am J Hum Genet , vol.62 , pp. 1228-1242
    • Whittemore, A.1    Tu, I.2
  • 45
    • 0024788805 scopus 로고
    • Man bites dog? The validity of maximizing lod scores to determine mode of inheritance
    • Elston R: Man bites dog? The validity of maximizing lod scores to determine mode of inheritance. Am J Med Genet 1989;34:487-488.
    • (1989) Am J Med Genet , vol.34 , pp. 487-488
    • Elston, R.1
  • 46
    • 0028029930 scopus 로고
    • Lods, wrods, and mods: The interpretation of lod scores calculated under different models
    • Hodge S, Elston R: Lods, wrods, and mods: The interpretation of lod scores calculated under different models. Genet Epidemiol 1994; 11:329-342.
    • (1994) Genet Epidemiol , vol.11 , pp. 329-342
    • Hodge, S.1    Elston, R.2


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