Hierarchical modeling of gene-environment interactions: Estimating NAT2* genotype-specific dietary effects on adenomatous polyps

Cancer Epidemiology Biomarkers and Prevention

Volumn 6, Issue 5, 1997, Pages 307-314

  Aragaki, Corinne C ^a,c   Greenland, Sander ^a   Probst Hensch, Nicole ^b   Haile, Robert W ^b  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b UNIVERSITY OF SOUTHERN CALIFORNIA   (United States)

^c Fred Hutchinson Cancer Research Center   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ADENOMATOUS POLYP; ARTICLE; CASE CONTROL STUDY; COLON MUCOSA; DIETARY INTAKE; ENVIRONMENTAL FACTOR; ENZYME ACTIVITY; ENZYME SUBSTRATE; GENE INSERTION; GENETIC SUSCEPTIBILITY; GENOTYPE; MODEL; PRIORITY JOURNAL; REGRESSION ANALYSIS; TANDEM REPEAT;

ADENOMATOUS POLYPS; ARYLAMINE N-ACETYLTRANSFERASE; CELL TRANSFORMATION, NEOPLASTIC; COCARCINOGENESIS; COLORECTAL NEOPLASMS; FOOD HABITS; GENE EXPRESSION REGULATION, NEOPLASTIC; GENOTYPE; HUMANS; LIKELIHOOD FUNCTIONS; MEAT; MODELS, GENETIC; MODELS, STATISTICAL; REGRESSION ANALYSIS; RISK;

EID: 0030954460     PISSN: 10559965     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (20)

1. Hwang, S-J., Beaty, T. H., Liang, K-Y., Coresh, J., and Khoury, M. J. Minimum sample size estimation to detect gene-environment interaction in case-control designs. Am. J. Epidemiol., 140: 1029-1037, 1994.
2. Sigurdsson, G., Jr., Gudnason, V., Sigurdsson, G., and Humphries, S. E. Interaction between a polymorphism of the apo A-1 promoter region and smoking determines plasma levels of HDL and apo A-1. Arterioscler. Thromb., 12: 1017-1022, 1992.
3. Shields, P. G., Caporaso, N. E., Falk, R. T., Sugimura, H., Trivers, G. E., Trump, B. F., Hoover, R. N., Weston, A., and Harris, C. C. Lung cancer, race, and CYP1A1 genetic polymorphism. Cancer Epidemiol., Biomarkers & Prev., 2: 481-485, 1993.
4. Sugimura, H., Suzuki, I., Hamada, G. S., Iwase, T., Takahashi, T., Nagura, K., Iwata, H., Watanabe, S., Kino, I., and Tsugane, S. Cytochrome P-450 1A1 genotype in lung cancer patients and controls in Rio de Janeiro, Brazil. Cancer Epidemiol., Biomarkers & Prev., 3: 145-148, 1994.
5. Kihara, M., Kihara, M., and Noda, K. Risk of smoking for squamous and small cell carcinomas of the lung modulated by combinations of CYP1AI and GSTM1 gene polymophisms in a Japanese population. Carcinogenesis (Lond.), 16:2331-2336, 1995.
6. London, S. J., Daly, A. K., Cooper, J., Navidi, W. C., Carpenter, C. L., and Idle, E. R. Polymorphism of glutathione S-transferase M1 and lung cancer risk among African-Americans and Caucasians in Los Angeles County, California. J. Natl. Cancer Inst. (Bethesda), 87: 1246-1253, 1995.
7. Hwang, S-J., Beaty, T. H., Panny, S. R., Street N. A., Joseph, J. M., Gordon, S., McIntosh, I., and Francomano, C. A. Association study for transforming growth factor α (TGF α) Taq1 polymorphism and oral clefts: indication of gene-environment interaction in a population-based sample of infants with birth defects. Am. J. Epidemiol., 141: 629-636, 1995.
8. Krall, E. A, Parry, P., Lichter, J. B., and Dawson-Hughes, B. Vitamin D receptor alleles and rates of bone loss: influences of years since menopause and calcium intake. J. Bone Miner. Res., 10: 978-984, 1995.
9. Weber, J. L. Know thy genome. Nat. Genet., 7: 343-344, 1994.
10. Reed, P. W., Davies, J. L., Copeman, J. B., Bennett, S. T., Palmer, S. M., Pritchard, L. E., Gough, S. C. L., Kawaguchi, Y., Cordell, H. J., Balfour, K. M., Jenkins, S. C., Powell, E. E., Vignal, A., and Todd, J. A. Chromosome-specific microsatellite sets for fluorescent-based, semi-automated genome mapping. Nat. Genet., 7: 390-395, 1994.
11. Nance, M. A. Huntington disease: another chapter rewritten. Am. J. Hum. Genet., 59: 1-6, 1996.
12. Rubinsztein, D. C., Leggo, J., Coles, R., Almqvist, E., Biancalana, V., Cassiman, J-J., Chotai, K., Connarty, M., Craufurd, D., Curtis, A., Curtis, D., Davidson, M. J., Differ, A-M., Dode, C., Dodge, A., Frontali, M., Ranen, N. G., Stine, O. C., Sherr, M., Abbott, M. H., Franz, M. L., Graham, C. A., Harper, P. S., Hedreen, J. C., Jackson, A., Kaplan, J-C., Losekoot, M., MacMillan, J. C., Morrison, P., Trottier, Y., Novelletto, A., Simpson, S. A., Theilmann, J., Whittaker, J. L., Folstein, S. E., Ross, C. A., and Hayden, M. R. Phenotypic characterization of individuals with 30-40 CAG repeats in the Huntington disease (HD) gene reveals HD cases with 36 repeats and apparently normal elderly individuals with 36-39 repeats. Am. J. Hum. Genet., 59: 16-22, 1996.
13. Greenland, S. Methods for epidemiologic analyses of multiple exposures: a review and comparative study of maximum-likelihood, preliminary-testing, and empirical-Bayes regression. Stat. Med., 12: 717-736, 1993.
14. Witte, J. S., Greenland, S., Haile, R. W., and Bird, C. L. Hierarchical regression analysis applied to a study of multiple dietary exposures and breast cancer. Epidemiology, 5: 612-621, 1994.
15. Gelman, A., Carlin, J. B., Stern, H. S., and Rubin, D. B. Bayesian Data Analysis. New York: Chapman and Hall, Inc., 1995.
16. Greenland, S. Second-stage least squares versus penalized quasi-likelihood for fitting hierarchical models in epidemiologic analyses. Stat. Med., 515-526, 1997.
17. Rothman, K., and Greenland, S. Modern Epidemiology, Ed. 2. New York: J. B. Lippincott Co., 1997.
18. Thomas, D. C., and Cortessis, V. K. A Gibbs sampling approach to linkage analysis. Hum. Hered., 42: 63-76, 1992.
19. Caporaso, N., and Goldstein, A. Cancer genes: single and susceptibility - exposing the difference. Pharmacogenetics, 5: 59-63, 1995.
20. Idle, J. R. Is environmental carcinogenesis modulated by host polymorphism? Mutat. Res., 247: 259-266, 1991.