The tripartite ATP-independent periplasmic (TRAP) transporters of bacteria and archaea

FEMS Microbiology Reviews

Volumn 25, Issue 4, 2001, Pages 405-424

  Kelly, David J ^a   Thomas, Gavin H ^a  

^a UNIVERSITY OF SHEFFIELD   (United Kingdom)

Author keywords

Binding protein; C4 dicarboxylate; DctM; DctP; DctQ; Extracytoplasmic solute receptor; Periplasm; Rhodobacter capsulatus; Symport; Tripartite ATP independent periplasmic transporter

Indexed keywords

ABC TRANSPORTER; ADENOSINE TRIPHOSPHATE; BACTERIAL PROTEIN; BINDING PROTEIN; CARRIER PROTEIN; HYBRID PROTEIN; PROTEIN DCTM; PROTEIN DCTP; PROTEIN DCTQ; TRIPARTITE ADENOSINE TRIPHOSPHATE INDEPENDENT PERIPLASMIC TRANSPORTER; UNCLASSIFIED DRUG;

AMINO ACID SEQUENCE; ARCHAEBACTERIUM; BACTERIAL TRANSLOCATION; CELL MEMBRANE TRANSPORT; CYTOPLASM; HYDROLYSIS; NONHUMAN; NUCLEOTIDE SEQUENCE; PROKARYOTE; PROTEIN FAMILY; REGULATORY MECHANISM; REVIEW; RHODOBACTER CAPSULATUS; WOLINELLA SUCCINOGENES;

AMINO ACID SEQUENCE; ARCHAEAL PROTEINS; BACTERIAL PROTEINS; BIOLOGICAL TRANSPORT, ACTIVE; CARRIER PROTEINS; DICARBOXYLIC ACID TRANSPORTERS; DICARBOXYLIC ACIDS; EVOLUTION, MOLECULAR; MEMBRANE PROTEINS; MEMBRANE TRANSPORT PROTEINS; MOLECULAR SEQUENCE DATA; PERIPLASMIC PROTEINS;

EID: 0034889137     PISSN: 01686445     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0168-6445(01)00061-4     Document Type: Review

References (81)

1. Molecular phylogeny as the basis for the classification of transport proteins from bacteria, archaea and eukarya
2. Bacterial transport: Energetics and mechanisms
3. Microbial genome analysis: Comparative transport capabilities in eighteen prokaryotes
4. A family of related ATP binding subunits coupled to many distinct biological processes in bacteria
5. ABC-transporters - From microorganisms to man
6. Evidence that the high affinity C4-dicarboxylate transport system of Rhodobacter capsulatus is a novel type of periplasmic permease
7. TRAP transporters: A new family of periplasmic solute transport systems encoded by the dctPQM genes of Rhodobacter capsulatus and by homologs in diverse Gram-negative bacteria
8. TRAP transporters: An ancient family of periplasmic solute-receptor dependent secondary active transporters
9. A functional-phylogenetic classification system for transmembrane solute transporters
10. Evidence for high-affinity, binding-protein-dependent transport systems in Gram-positive bacteria and in Mycoplasma
11. Two periplasmic transport proteins which interact with a common membrane receptor show extensive homology: Complete nucleotide sequences
12. Atomic structures of periplasmic binding-proteins and the high-affinity active transport systems in bacteria
13. Structural, functional and evolutionary relationships among extracellular solute-binding receptors of bacteria
14. The mechanism of sugar binding to the periplasmic receptor for galactose chemotaxis and transport in Escherichia coli
15. Rates of ligand binding to periplasmic proteins involved in bacterial transport and chemotaxis
16. Periplasmic binding-protein structure and function. Refined X-ray structures of the leucine/isoleucine/valine binding-protein and its complex with leucine
17. Agonist-induced isomerisation in a glutamate receptor ligand-binding domain - A kinetic and mutagenetic analysis
18. A new subfamily of bacterial ABC-type transport systems catalyzing export of drugs and carbohydrates
19. Orphan enzyme or patriarch of a new tribe: The arsenic resistance ATPase of bacterial plasmids
20. Lateral diffusion of proteins in the periplasm of Escherichia coli
21. Genetic evidence for substrate and binding-protein recognition by the MalF and MalG proteins, cytoplasmic membrane components of the Escherichia coli maltose transport system
22. Reconstitution of a bacterial periplasmic permease in proteoliposomes and demonstration of ATP hydrolysis concomitant with transport
23. Overproduction, solubilisation and reconstitution of the maltose transport system from Escherichia coli
24. Mechanism of maltose transport in Escherichia coli: Transmembrane signalling by periplasmic binding proteins
25. Binding-protein-independent histidine permease mutants. Uncoupling of ATP hydrolysis from transmembrane signalling
26. Both lobes of the soluble receptor of the periplasmic histidine permease, an ABC transporter (Traffic ATPase), interact with the membrane bound complex
27. Diversity of transport mechanisms: Common structural principles
28. Uptake of C4-dicarboxylates and pyruvate by Rhodopseudomonas sphaeroides
29. Physiology and genetics of C4-dicarboxylate transport in Rhodobacter capsulatus
30. Binding-protein dependent transport of C4-dicarboxylates in Rhodobacter capsulatus
31. Purification, characterisation and nucleotide sequence of the periplasmic C4-dicarboxylate binding-protein (DctP) from Rhodobacter capsulatus
32. Mutagenesis, cloning and complementation analysis of C4-dicarboxylate transport genes from Rhodobacter capsulatus
33. Sequence analysis and interposon mutagenesis of a sensor-kinase (DctS) and response-regulator (DctR) controlling synthesis of the high-affinity C4-dicarboxylate transport system in Rhodobacter capsulatus
34. PAS domains: Internal sensors of oxygen, redox potential and light
35. The mechanism of ligand binding to the periplasmic C4-dicarboxylate binding-protein (DctP) from Rhodobacter capsulatus
36. Perturbation of the equilibrium between open and closed conformations of the periplasmic C4-dicarboxylate binding-protein from Rhodobacter capsulatus
37. Topological analysis of DctQ, the small integral-membrane protein of the C4-dicarboxylate TRAP transporter of Rhodobacter capsulatus
38. The distribution of positively charged residues in bacterial inner membrane proteins correlates with the trans-membrane topology
39. Regulation of solute transport in streptococci by external and internal pH values
40. Regulation of cytoplasmic pH in bacteria
41. Binding-protein-dependent alanine transport in Rhodobacter sphaeroides is regulated by the internal pH
42. +
43. Effects of potassium ions on the proton-motive force in Rhodobacter sphaeroides
44. Sugar-binding and crystallographic studies of an arabinose binding-protein mutant (met108leu) that exhibits enhanced affinity and altered specificity
45. Ligand-dependent conformational plasticity of the periplasmic histidine binding-protein HisJ
46. The 2 Å resolution structure of the sulfate binding-protein involved in active transport in Salmonella typhimurium
47. High specificity of a phosphate transport protein determined by hydrogen bonds
48. Interdomain salt bridges modulate ligand-induced domain motion of the sulfate receptor protein for active transport
49. Succinate transport in Rhizobium leguminosarum
50. Escherichia coli possesses two homologous anaerobic C4-dicarboxylate membrane transporters (DcuA and DcuB) distinct from the aerobic dicarboxylate transport system (Dct)
51. Topological analysis of DcuA, an anaerobic C4-dicarboxylate transporter of Escherichia coli
52. Transcriptional regulation and organisation of the dcuA and dcuB genes encoding homologous anaerobic C4-dicarboxylate transporters in Escherichia coli
53. Inactivation and regulation of the aerobic C4-dicarboxylate transport (dctA) gene of Escherichia coli
54. Properties of an inducible C4-dicarboxylic acid transport system in Bacillus subtilis
55. The evolution of ion pumps
56. Reconstitution of periplasmic transport in inside-out vesicles. Energisation by ATP
57. Transport of C4-dicarboxylates in Wolinella succinogenes
58. Characterisation of a binding-protein dependent glutamate transport system of Rhodobacter sphaeroides
59. Glutamate transport in Rhodobacter sphaeroides is mediated by a novel binding-protein dependent secondary transport system
60. Molecular basis of symbiosis between Rhizobium and legumes
61. Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions
62. Cloning, nucleotide sequence and characterisation of the mannitol dehydrogenase gene from Rhodobacter sphaeroides
63. Activation of a cryptic gene encoding a kinase for L-xylulose opens a new pathway for the utilisation of L-lyxose by Escherichia coli
64. Regulation of expression of the yiaKLMNOPQRS operon for carbohydrate utilisation in E. coli: Involvement of the main transcriptional factors
65. Regulation of the transport system for C4-dicarboxylic acids in Bacillus subtilis
66. An Agrobacterium two-component regulatory system for the detection of chemicals released from plant wounds
67. Complete genome sequence of Pseudomonas aeruginosa PAO1, an opportunistic pathogen
68. The cloning, expression, and nucleotide sequence of a gene coding for an immunogenic Brucella abortus protein
69. Major facilitator superfamily
70. Identification of a third secondary carrier, DcuC, for anaerobic C4-dicarboxylate transport in Escherichia coli: Roles of the three Dcu carriers in uptake and exchange
71. Functioning of DcuC as the C4-dicarboxylate carrier during glucose fermentation by Escherichia coli
72. Alternate energy-coupling of ArsB, the membrane subunit of the Ars anion-translocating ATPase
73. The hisT-purF region of the Escherichia coli K-12 chromosome. Identification of additional genes of the hisT and purF operons
74. Construction of environmental DNA libraries in Escherichia coli and screening for the presence of genes conferring utilisation of 4-hydroxybutyrate
75. The gluconate high affinity transport of GntI in Escherichia coli involves a multicomponent complex system
76. Characterization of the genes for two protocatechuate 3,4-dioxygenases from the 4-sulfocatechol-degrading bacterium Agrobacterium radiobacter strain S2
77. Genetic structure and functional implication of the fcb gene cluster for hydrolytic dechlorination of 4-chlorobenzoate from Pseudomonas sp. DJ-12
78. Complete genome sequence of the alkaliphilic bacterium Bacillus halodurans and genomic sequence comparison with Bacillus subtilis
79. Vectorial metabolism and the evolution of transport systems