Kinetic analysis of the M1 RNA folding pathway

Journal of Molecular Biology

Volumn 304, Issue 5, 2000, Pages 699-705

  Kent, Oliver ^a   Chaulk, Steven G ^b   MacMillan, Andrew M ^a  

^a UNIVERSITY OF ALBERTA   (Canada)

^b UNIVERSITY OF TORONTO   (Canada)

Author keywords

Kinetic footprinting; M1 RNA; Peroxynitrous acid; RNA folding; RNase P

Indexed keywords

MAGNESIUM; MESSENGER RNA; PEROXYNITRITE; RIBONUCLEASE P; RIBOZYME;

ARTICLE; CATALYSIS; DNA FOOTPRINTING; ENZYME STRUCTURE; ESCHERICHIA COLI; KINETICS; NONHUMAN; PRIORITY JOURNAL; PROTEIN DOMAIN; PROTEIN FOLDING; PROTEIN INTERACTION; STRUCTURE ANALYSIS;

EID: 0034671289     PISSN: 00222836     EISSN: None     Source Type: Journal    
DOI: 10.1006/jmbi.2000.4263     Document Type: Article

References (18)

1. Ribonuclease P
2. Tertiary motifs in RNA structure and folding
3. Characterization of the Tetrahymena ribozyme folding pathway using the kinetic footprinting reagent peroxynitrous acid
4. Kinetic footprinting of an RNA-folding pathway using peroxynitrous acid
5. Comparative photocross-linking analysis of the tertiary structures of Escherichia coli and Bacillus subtilis RNase P RNAs
6. 2+-dependent folding of a large ribozyme without kinetic traps
7. A preorganized active site in the crystal structure of the Tetrahymena ribozyme
8. The RNA moiety of ribonuclease P is the catalytic subunit of the enzyme
9. The secondary structure of ribonuclease P RNA, the catalytic element of a ribonucleoprotein enzyme
10. A stable solid that generates hydroxyl radical upon dissolution in aqueous solutions: Reaction with proteins and nucleic acid
11. "Footprinting" proteins on DNA with peroxonitrous acid
12. Domain structure of the ribozyme from eubacterial ribonuclease P
13. Derivation of the three-dimensional architecture of bacterial ribonuclease P RNAs from comparative sequence analysis
14. Pathway modulation, circular permutation and rapid RNA folding under kinetic control
15. Time-resolved synchrotron X-ray "footprinting", a new approach to the study of nucleic acid structure and function: Application to protein-DNA interactions and RNA folding
16. RNA folding at millisecond intervals by synchrotron hydroxyl radical footprinting
17. Three-dimensional working model of M1 RNA, the catalytic RNA subunit of ribonuclease P from Escherichia coli
18. Slow folding kinetics of RNase P RNA