A novel mechanism of xylan binding by a lectin-like module from Streptomyces lividans xylanase 10A

Biochemical Journal

Volumn 350, Issue 3, 2000, Pages 933-941

  Boraston, A B ^a   Tomme, P ^a   Amandoron, E A ^a   Kilburn, D G ^a  

^a Networks of Centres of Excellence   (Canada)

Author keywords

Association; Carbohydrate binding module; Cellulose binding domain; Protein sugar interactions; Ricin

Indexed keywords

ARABINOGALACTAN; CARBOHYDRATE BINDING PROTEIN; CELLULOSE; LAMINARAN; LECTIN; LICHENAN; MONOSACCHARIDE; OLIGOSACCHARIDE; PACHYMAN; POLYSACCHARIDE; RICIN; UNCLASSIFIED DRUG; XYLAN; XYLAN ENDO 1,3 BETA XYLOSIDASE;

ADSORPTION; AMINO ACID SEQUENCE; ARTICLE; BINDING SITE; CARBOHYDRATE ANALYSIS; CONTROLLED STUDY; MASS SPECTROMETRY; NONHUMAN; PRIORITY JOURNAL; PROTEIN BINDING; PROTEIN DENATURATION; SITE DIRECTED MUTAGENESIS; STREPTOMYCES LIVIDANS;

AMINO ACID SEQUENCE; BASE SEQUENCE; BINDING SITES; DNA PRIMERS; LECTINS; MOLECULAR SEQUENCE DATA; PROTEIN BINDING; SEQUENCE HOMOLOGY, AMINO ACID; STREPTOMYCES; SUPPORT, NON-U.S. GOV'T; XYLANS; XYLOSIDASES;

STREPTOMYCES LIVIDANS;

EID: 0034664979     PISSN: 02646021     EISSN: None     Source Type: Journal    
DOI: 10.1042/0264-6021:3500933     Document Type: Article

References (52)

1. Domains in microbial beta-1,4-glycanases: Sequence conservation, function, and enzyme families
2. Characterization and affinity applications of cellulose-binding domains
3. Carbohydrate-active enzymes: An integrated database approach
4. Carbohydrate-binding modules: Diversity of structure and function
5. Novel galactose-binding proteins in Annellda. Characterization of 29-kDa tandem repeat-type lectins from the earthworm Lumbricus terrestris
6. Structural determinants of Ricinus communis agglutinin and toxin specificity for oligosaccharides
7. New α-ι-arabinofuranosidase produced by Streptomyces lividans: Cloning and DNA sequence of the abfB gene and characterization of the enzyme
8. Substrate-binding domains of glycanases from Streptomyces lividans: Characterization of a new family of xylan-binding domains
9. The adsorption of a bacterial cellulase and its two isolated domains to crystalline cellulose
10. The binding of Cellulomonas fimi endoglucanase C (CenC) to cellulose and Sephadex is mediated by the N-terminal repeats
11. An examination of some methods for fractionation of plant hemicelluloses
12. Isolation and analysis of cell walls from plant material
13. Relationship of an unstable argG gene to a 5.7-kilobase amplifiable DNA sequence in Streptomyces lividans 66
14. The pTugA and pTugAS vectors for high-level expression of cloned genes in Escherichia coli
15. Interaction of polysaccharides with the N-terminal cellulose-binding domain of Cellulomonas fimi CenC. 1. Binding specificity and calorimetric analysis
16. Statistical determination of the average values of the extinction coefficients of tryptophan and tyrosine in native proteins
17. Fluorescence quenching studies with proteins
18. Fluorescence methods for studying equilibrium macromolecule-ligand interactions
19. Interaction of soluble cellooligosaccharides with the N-terminal cellulose-binding domain of Cellulomonas fimi CenC 2. NMR and ultraviolet absorption spectroscopy
20. Pseudomonas cellulose-binding domains mediate their effects by increasing enzyme substrate proximity
21. Monosaccharides
22. Colorimetric and fluorometric carbohydrate determination with ρ-hydroxybenzoic acid hydrazide
23. Structure of ricin B-chain at 2.5 A resolution
24. Binding of two molecules of 4-methylumbelliferyl galactose or 4-methylumbelliferyl N-acetylgalactosamine to the B chains of ricin and Ricinus communis agglutinin and to purified ricin B chain
25. Binding of galactose and lactose to ricin: Equilibrium studies
26. Double-site ricin B chain mutants retain galactose binding
27. Ricin toxin contains at least three galactose-binding sites located in B chain subdomains 1α, 1β, and 2γ
28. Molecular features and basic understanding of protein-carbohydrate interactions: The arabinose-binding protein-sugar complex
29. Evaluation of the stoichiometry and energetics of carbohydrate binding to Ricinus communis agglutinin: A calorimetric study
30. The interaction of Abrus precatorius agglutinin with saccharides as analyzed by fluorescence spectroscopy
31. Fluorimetric studies of the binding of Momordica charantia (bitter gourd) lectin with ligands
32. Lectins: Carbohydrate-specific proteins that mediate cellular recognition
33. Carbohydrate-binding proteins: Tertiary structures and protein-sugar interactions
34. Structural basis of lectin-carbohydrate recognition
35. Composition of plant cell walls
36. Position of the O-acetyl groups in Birch xylan
37. The polysaccharides of White Birch (Betula papyrifera). III. Determination of composition and identification of 2-O-(4-O-methyl-D-glucopyranosyluronic acid)-D-xylopyranose
38. A family IIb xylan-binding domain has a similar secondary structure to a homologous family IIa cellulose-binding domain but different ligand specificity
39. Solution structure of a cellulose-binding domain from Cellulomonas fimi by nuclear magnetic resonance spectroscopy
40. Crystal structure of a bacterial family-III cellulose-binding domain: A general mechanism for attachment to cellulose
41. Solution structure of the cellulose-binding domain of the endoglucanase Z secreted by Erwinia chrysanthemi
42. Structure of the N-terminal cellulose-binding domain of Cellulomonas fimi CenC determined by nuclear magnetic resonance spectroscopy
43. Identification of functionally important amino acids in the cellulose-binding domain of Trichoderma reesei cellobiohydrolase I
44. Structure and evolution of ricin B chain
45. Tracing the spread of fibronectin type III domains in bacterial glycohydrolases
46. The nature of the cellulose-binding domain affects the activities of a bacterial endoglucanase on different forms of cellulose
47. Roles of the catalytic domain and two cellulose binding domains of Therrnornonospora fusca E4 in cellulose hydrolysis
48. Non-hydrolytic disruption of cellulose fibres by the binding domain of a bacterial cellulase
49. CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position specific gap penalties and weight matrix choice