The complete DNA sequence and analysis of R27, a large IncHI plasmid from Salmonella typhi that is temperature sensitive for transfer

Nucleic Acids Research

Volumn 28, Issue 10, 2000, Pages 2177-2186

  Sherburne, Craig K ^a   Lawley, Trevor D ^a   Gilmour, Matthew W ^a   Blattner, F R ^b   Burland, Valerie ^b   Grotbeck, Erik ^b   Rose, Debra J ^b   Taylor, Diane E ^a  

^a UNIVERSITY OF ALBERTA   (Canada)

^b UNIVERSITY OF WISCONSIN MADISON   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

DNA BINDING PROTEIN; PLASMID DNA; TETRACYCLINE;

ANTIBIOTIC RESISTANCE; ARTICLE; BACTERIUM CONJUGATION; CONTROLLED STUDY; DNA REPLICATION; DNA SEQUENCE; DNA TRANSFER; NONHUMAN; NUCLEOTIDE SEQUENCE; OPEN READING FRAME; PLASMID; PRIORITY JOURNAL; SALMONELLA TYPHI; SEQUENCE HOMOLOGY; TEMPERATURE SENSITIVITY; TRANSPOSON;

BACTERIA (MICROORGANISMS); NEGIBACTERIA; PROKARYOTA; PTEROGYNE NITENS; SALMONELLA TYPHI;

EID: 0034657620     PISSN: 03051048     EISSN: None     Source Type: Journal    
DOI: 10.1093/nar/28.10.2177     Document Type: Article

References (75)

1. Smith, H.W. (1974) Lancet, ii. 281-282.
2. Fica, A., Fernandez-Beras, M.E., Aron-Hott, L., Rivas, A., D'Ottone, K., Chumpitaz, J., Guevara, J.M., Rodriguez, M. and Cabello, F. (1997) Microbial Drug Resist., 3, 339-343.
3. Harnett, N., McLeod, S., AuYong, Y., Wan, J., Alexander, S., Khakhria, R. and Krishnan, C. (1998) Can. J. Microbiol., 44, 356-363.
4. Maher, D. and Taylor, D.E. (1993) Can. J. Microbiol., 39, 581-587.
5. Gabant, P., Newnham, P., Taylor, D. and Couturier, M. (1993) J. Bacteriol., 175, 7697-7701.
6. Gabant, P., Chahdi, A.O. and Couturier, M. (1994) Plasmid, 31, 111-120.
7. Novotny, C., Carnahan, J. and Brinton, C.C.J. (1969) J. Bacteriol., 98, 1294-1306.
8. Maher, D., Sherburne, R. and Taylor, D.E. (1993) J. Bacteriol., 175, 2175-2183.
9. Taylor, D.E., Brose, E.C., Kwan, S. and Van, W. (1985) J. Bacteriol., 162, 1221-1226.
10. Rooker, M., Sherburne, C., Lawley, D. and Taylor, D.E. (1999) Plasmid, 41, 226-39.
11. Taylor, D.E., Newnham, P.J., Sherburne, C., Lawley, T.D. and Rooker, M.M. (1999) Plasmid, 41, 207-218.
12. Frost, L.S., Ippen-Ihler, K. and Skurray, R.A. (1994) Microbiol. Rev., 58, 162-210.
13. Whelan, K.F., Maher, D., Colleran, E. and Taylor, D.E. (1994) J. Bacteriol., 176, 2242-2251.
14. Mahillon, J., Kirkpatrick, H., Kijenski, H., Bloch, C., Rode, C., Mayhew, G., Rose, D., Plunkett, G.R., Burland, V. and Blattner, F. (1998) Gene, 223, 47-54.
15. Burland, V., Daniels, D., Plunkett, G.R. and Blattner, F. (1993) Nucleic Acids Res., 21, 3385-3390.
16. Blattner, F.R., Plunkett, G.I., Bloch, C.A., Perna, N.T., Burland, V., Riley, M., Collado-Vides, J., Glasner, J.D., Rode, C.K., Mayhew, G., Gregor, J., Davis, N.W., Kirkpatrick, H.A., Goeden, M.A., Rose, D.J., Mau, B. and Shao, Y. (1997) Science, 277, 1453-1474.
17. Burland, V., Shao, Y., Perna, N.T., Plunkett, G., Sofia, H.J. and Blattner, F.R. (1998) Nucleic Acids Res., 26, 4196-1204.
18. Altschul, S.D., Gish, W., Miller, W., Myers, E.W. and Lipman, D.J. (1990) J. Mol. Biol., 215, 403-410.
19. Pearson, W.R. and Lipman, D.J. (1988) Proc. Natl Acad. Sci. USA, 85, 2444-2448.
20. Lupas, A., VanDyke, M. and Stock, J. (1991) Science, 252, 1162-1164.
21. Berger, B., Wilson, D.B., Wolf, E., Tonchev, T., Milla, M. and Kim, P.S. (1995) Proc. Natl Acad Sci. USA, 92, 8259-8263.
22. Hill, L.R. (1966) J. Gen. Microbiol., 44, 419-437.
23. Freiberg, C., Fellay, R., Bairoch, A., Broughton, W.J., Rosenthal, A. and Perret, X. (1997) Nature, 387, 394-401.
24. Saul, D., Lane, D. and Bergquist, P.L. (1988) Mol. Microbiol., 2, 219-225.
25. Lawley, T.D., Burland, V. and Taylor, D.E. (2000) Plasmid, 43, in press.
26. Newnham, P.J. (1995) PhD thesis. University of Alberta, Edmonton, Alberta, Canada.
27. Newnham, P.J. and Taylor, D.E. (1994) Mol. Microbiol., 11, 757-768.
28. Geiger, G.E. and Modrich, P. (1979) J. Biol. Chem., 254, 1408-1413.
29. Wilkins, B. and Lanka, E. (1993) In Clewell, D.B. (ed.), Bacterial Conjugation. Plenum Press, New York, NY, pp. 105-129.
30. Llosa, M., Bolland, S. and de la Cruz, F. (1994) J. Mol. Biol., 235, 448-464.
31. Balzer, D., Werner, P. and Lanka, E. (1994) J. Bacteriol., 176, 4285-4295.
32. Page, D.T., Whelan, K.F. and Colleran, E. (1999) FEMS Microbiol. Lett., 179, 21-29.
33. Tobe, T., Hayashi, T., Han, C.G., Schoolnik, G.K., Ohtsubo, E. and Sasakawa, C. (1999) Infect. Immun., 67, 5455-5462.
34. Abeles, A.L., Friedman, S.A. and Austin, S.J. (1985) J. Mol. Biol., 185, 261-272.
35. Davis, M.A. and Austin, S.J. (1988) EMBO J., 7, 1881-1888.
36. Friedman, S.A. and Austin, S.J. (1988) Plasmid, 19, 103-112.
37. Haase, J. and Lanka, E. (1997) J. Bacteriol., 179, 5728-5735.
38. Fullner, K.J. and Nester, E.W. (1996) J. Bacteriol., 178, 1498-1504.
39. Christie, P.J. (1997) J. Bacteriol., 179, 3085-3094.
40. Zupan, J.R. and Zambryski, P. (1995) Plant Physiol., 107, 1041-1047.
41. Riker, A.J. (1926) J. Agric. Res., 32, 83-96.
42. Jin, S., Song, Y.N., Deng, W.Y., Gordon, M.P. and Nester, E.W. (1993) J. Bacteriol., 175, 6830-6835.
43. Tempe, J., Petit, A., Holsters, M., vanMontagu, M. and Schell, J. (1977) Proc. Natl Acad. Sci. USA, 74, 2848-2859.
44. Taylor, D.E. and Levine, J.G. (1980) J. Gen. Microbiol., 116, 475-484.
45. Hurme, R., Berndt, K.D., Normork, E. and Rhen, M. (1997) Cell, 90, 55-64.
46. Hurme, R., Berndt, K.D., Normork, E. and Rhen, M. (1996) J. Biol. Chem., 271, 12626-12631.
47. Mourino, M., Madrid, C., Balsalobre, C., Prenafeta, A., Munoa, F., Blanco, J., Blanco, M., Blanco, J.E. and Juarez, A. (1996) Infect. Immun., 64, 2881-2884.
48. Brooks, J.E., Blumenthal, R.M. and Gingeras, T.R. (1983) Nucleic Acids Res., 11, 837-851.
49. Dalrymple, B., Caspers, P. and Arber, W. (1984) EMBO J., 3, 2145-2149.
50. Salmi, D., Magrini, V., Hartzell, P.L. and Youderian, P. (1998) J. Bacteriol., 180, 614-621.
51. Bogosian, G., Bilyeu, K. and O'Neil, J.P. (1993) Gene, 133, 17-22.
52. Fleischmann, R.D., Adams, M.D., White, O., Clayton, R.A., Kirkness, E.F., Kerlavage, A.R., Bult, C.J., Tomb, J.-F., Dougherty, B.A., Merrick, J.M., McKenney, K., Sutton, G., FitzHugh, W., Fields, C.A., Gocayne, J.D., Scott, J.D., Shirley, R., Liu, L.-I., Glodek, A., Kelley, J.M., Weidman, J.F., Phillips, C.A., Spriggs, T., Hedblom, E., Cotton, M.D., Utterback, T.R., Hanna, M.C., Nguyen, D.T., Saudek, D.M., Brandon, R.C., Fine, L.D., Fritchman, J.L., Fuhrmann, J.L., Geoghagen, N.S.M., Gnehm, C.L., McDonald, L.A., Small, K.V., Fraser, C.M., Smith, H.O. and Venter, J.C. (1995) Science, 269, 496-512.
53. Hillen, W. and Schollmeier, K., (1983) Nucleic Acids Res., 11, 525-539.
54. Schollmeier, K. and Hillen, W. (1984) J. Bacteriol., 160, 499-503.
55. Perna, N.T, Mayhew, G.F., Posfai, G., Elliott, S., Donnenberg, M.S., Kaper, J.B. and Blattner, F.R. (1998) Infect. Immun., 66, 3810-3817.
56. Drummelsmith, J., Amor, P.A. and Whitfield, C. (1997) J. Bacteriol., 179, 3232-3238.
57. Ohtsubo, H. and Ohtsubo, E. (1978) Proc. Natl Acad. Sci. USA, 75, 615-619.
58. Daniels, D.L., Plunkett, G.I., Burland, V. and Blattner, F.R. (1992) Science, 257, 771-778.
59. Golub, E.I. and Panzer, H.A. (1988) Mol. Gen. Genet., 214, 353-357.
60. Romine, M.F., Stillwell, L.C., Wong, K.-K., Thurston, S.J., Sisk, E.C., Sensen, C.W., Gaasterland, T., Saffer, J.D. and Fredrickson, J.K. (1999) J. Bacteriol., 181, 1585-1602.
61. Firth, N. and Skurray, R. (1992) Mol. Gen. Genet., 232, 145-153.
62. Shevchik, V.E., Condemine, G. and Robert-Baudouy, J. (1994) EMBO J., 13, 2007-2012.
63. Hendrix, L.R., Mallavia, L.P. and Samuel, J.E. (1993) Infect. Immun., 61, 470-477.
64. Perry, K.L., Elledge, S.J., Mitchell, B.B., Marsh, L. and Walker, G.C. (1985) Proc. Natl Acad. Sci. USA, 82, 4331-4335.
65. Loessner, M.J., Wendlinger, G. and Scherer, S. (1995) Mol. Microbiol., 16, 1231-1241.
66. Sasatsu, M., Misra, T.K., CHu, L., Laddaga, R. and Silver, S. (1985) J. Bacteriol., 164, 983-993.
67. Vlcek, C., Paces, V., Maltsev, N., Paces, J., Haselkorn, R. and Fonstein, M. (1997) Proc. Natl Acad. Sci. USA, 94, 9384-9388.
68. Muse, W.B. and Bender, R.A. (1998) J. Bacteriol., 180, 1166-1173.
69. Gerlitz, M., Hrabak, O. and Schwab, H. (1990) J. Bacteriol., 172, 6194-6203.
70. Som, S., Bhagwat, A.S. and Friedman, S. (1987) Nucleic Acids Res., 15, 313-332.
71. Fraser, C.M., Casjens, S., Huang, W.M., Sutton, G.G., Clayton, R.A., Lathigra, R., White, O., Ketchum, K.A., Dodson, R., Hickey, E.K., Gwinn, M., Dougherty, B., Tomb, J.-F., Fleischmann, R.D., Richardson, D., Peterson, J., Kerlavage, A.R., Quackenbush, J., Salzberg, S., Hanson, M., van-Vugt, R., Palmer, N., Adams, M.D., Gocayne, J.D., Weidman, J., Utterback, T., Watthey, L., McDonald, L., Artiach, P., Bowman, C., Garland, S., Fujii, C., Cotton, M.D., Horst, K., Roberts, K., Hatch, B., Smith, H.O. and Venter, J.C. (1997) Nature, 390, 580-586.
72. Pon, C.L., Calogero, R.A. and Gualerzi, C.O. (1988) Mol. Gen. Genet., 212, 199-202.
73. Johnsrud, L. (1979) Mol. Gen. Genet., 169, 213-218.
74. Machida, Y., Machida, C. and Ohtsubo, E. (1984) J. Mol. Biol., 177, 229-245.
75. Ronecker, H.J. and Rak, B. (1987) Gene, 59, 291-296.