The road taken: Past and future foundations of membrane traffic

Cell

Volumn 100, Issue 1, 2000, Pages 99-112

  Mellman, Ira ^a   Warren, Graham ^a  

^a YALE UNIVERSITY SCHOOL OF MEDICINE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CELL FRACTIONATION; CELL MEMBRANE TRANSPORT; CELL SELECTION; CELL STRUCTURE; ENDOCYTOSIS; GOLGI COMPLEX; MEMBRANE FUSION; NONHUMAN; PRIORITY JOURNAL; PROTEIN FOLDING; PROTEIN SECRETION; REVIEW; SYNAPSE VESICLE;

EID: 0034614647     PISSN: 00928674     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0092-8674(00)81687-6     Document Type: Review

References (108)

1. Arvan, P., and Castle, D. (1998). Sorting and storage during secretory granule biogenesis - Looking backward and looking forward. Biochem J. 332, 593-610.
2. Baumert, M., Maycox, P.R., Navone, F., De Camilli, P., and Jahn, R. (1989). Synaptobrevin: An integral membrane protein of 18,000 daltons present in small synaptic vesicles of rat brain. EMBO J. 8, 379-384.
3. Bednarek, S.Y., Ravazzola, M., Hosobuchi, M., Amherdt, M., Perrelet, A., Schekman, R., and Orci, L. (1995). COP I-coated and COP II-coated vesicles bud directly from the endoplasmic reticulum in yeast. Cell 83, 1183-1196.
4. Bennett, M.K., Calakos, N., and Scheller, R.H. (1992). Syntaxin: A synaptic protein implicated in docking of synaptic vesicles at presynaptic active zones. Science 257, 255-259.
5. Bentivoglio, M. (1998). 1898 - The Golgi-apparatus emerges from nerve-cells. Trends Neurosci. 21, 195-200.
6. Bergmann, J.E., Tokuyasu, K.T., and Singer, S.J. (1981). Passage of an integral membrane protein, the vesicular stomatitis virus glyco-protein, through the Golgi apparatus en route to the plasma membrane. Proc. Natl. Acad. Sci. USA 78, 1746-1750.
7. Blobel, G. (1980). Intracellular protein topogenesis. Proc. Natl. Acad. Sci. USA 77, 1496-1500.
8. Blobel, G., and Dobberstein, B. (1975a). Transfer of proteins across membranes. II. Reconstitution of functional rough microsomes from heterologous components. J. Cell Biol. 67, 852-862.
9. Blobel, G., and Dobberstein, B. (1975b). Transfer of proteins across membranes. I. Presence of proteolytically processed and unprocessed nascent immunoglobulin light chains on membrane-bound ribosomes of murine myeloma. J. Cell Biol. 67, 835-851.
10. Block, M.R., Glick, B.S., Wilcox, C.A., Wieland, F.T., and Rothman, J.E. (1988). Purification of an N-ethylmaleimide-sensitive protein catalyzing vesicular transport. Proc. Natl. Acad. Sci. USA 85, 7852-7856.
11. Bonifacino, J.S., and Dell'Angelica, E.C. (1999). Molecular bases for the recognition of tyrosine-based sorting signals. J. Cell Biol. 145, 923-926.
12. Bretscher, M.S., and Munro, S. (1993). Cholesterol and the Golgi apparatus. Science 267, 1280-1281.
13. Bretscher, M.S., and Raff, M.C. (1975). Mammalian plasma membranes. Nature 258, 43-49.
14. Chavrier, P., Parton, R.G., Hauri, H.P., Simons, K., and Zerial, M. (1990). Localization of low molecular weight GTP binding proteins to exocytic and endocytic compartments. Cell 62, 317-329.
15. Clary, D.O., Griff, I.C., and Rothman, J.E. (1990). SNAPs, a family of NSF attachment proteins involved in intracellular membrane fusion in animals and yeast. Cell 61, 709-721.
16. Cohen, A.R., Woods, D.F., Marfatia, S.M., Walther, Z., Chishti, A.H., Anderson, J.M., and Wood, D.F. (1998). Human CASK/LIN-2 binds syndecan-2 and protein 4.1 and localizes to the basolateral membrane of epithelial cells. J. Cell Biol. 142, 129-138. Erratum: J. Cell Biol. 142 (4), 1998.
17. de Duve, C. (1975). Exploring cells with a centrifuge. Science 189, 186-194.
18. Dotti, C.G., and Simons, K. (1990). Polarized sorting of viral glycoproteins to the axon and dendrites of hippocampal neurons in culture. Cell 62, 63-72.
19. Duong, F., Eichler, J., Price, A., Leonard, M.R., and Wickner, W. (1997). Biogenesis of the gram-negative bacterial envelope. Cell 91, 567-573.
20. Ellgaard, L., Molinari, M., and Helenius, A. (1999). Setting the standards: Quality control in the secretory pathway. Science 286, 1882-1888.
21. Ellis, R.J., and Hartl, F.U. (1999). Principles of protein folding in the cellular environment. Curr. Opin. Struct. Biol. 9, 102-110.
22. Engelman, D.M. (1971). Lipid bilayer structure in the membrane of Mycoplasma laidlawii. J. Mol. Biol. 58, 153-165.
23. Felder, S., Miller, K., Moehren, G., Ullrich, A., Schlessinger, J., and Hopkins, C.R. (1990). Kinase activity controls the sorting of the epidermal growth factor receptor within the multivesicular body. Cell 61, 623-634.
24. Fernandez-Chacon, R., and Sudhof, T.C. (1999). Genetics of synaptic vesicle function: Toward the complete functional anatomy of an organelle. Annu. Rev. Physiol. 61, 753-776.
25. Ferro-Novick, S., and Jahn, R. (1994). Vesicle fusion from yeast to man. Nature 370, 191-193.
26. Folsch, H., Ohno, H., Bonifacino, J.S., and Mellman, I. (1999). A novel clathrin adaptor complex mediates basolateral targeting in polarized epithelial cells. Cell 99, 189-198.
27. Fries, E., and Rothman, J.E. (1980). Transport of vesicular stomatitis virus glycoprotein in a cell-free extract. Proc. Natl. Acad. Sci. USA 77, 3870-3874.
28. Frye, L.D., and Edidin, M. (1970). The rapid intermixing of cell surface antigens after formation of mouse-human heterokaryons. J. Cell Sci. 7, 319-335.
29. Gaynor, E.C., and Emr, S.D. (1997). Copi-independent anterograde transport: Cargo-selective ER to Golgi protein transport in yeast COPI mutants. J. Cell Biol. 136, 789-802.
30. Goldstein, J.L., Andersen, R.G., and Brown, M.S. (1979). Coated pits, coated vesicles, and receptor-mediated endocytosis. Nature 279, 679-685.
31. Golgi, C. (1898). Sur la structure des cellules nerveuses. Arch. Ital. Biol. 30, 60-71.
32. Gorlich, D., and Laskey, R.A. (1995). Roles of importin in nuclear protein import. Cold Spring Harb. Symp. Quant. Biol. 60, 695-699.
33. Gorter, E., and Grendel, F. (1925). On bimolecular layers of lipoids on the chromocytes of the blood. J. Exp. Med. 41, 439-443.
34. Griffiths, G., and Simons, K. (1986). The trans Golgi network: Sorting at the exit site of the Golgi complex. Science 234, 438-443.
35. Haigler, H.T., McKanna, J.A., and Cohen, S. (1979). Direct visualization of the binding and internalization of a ferritin conjugate of epidermal growth factor in human carcinoma cells A-431. J. Cell Biol. 81, 382-395.
36. Hanson, P.I., Roth, R., Morisaki, H., Jahn, R., and Heuser, J.E. (1997). Structure and conformational changes in NSF and its membrane receptor complexes visualized by quick-freeze/deep-etch electron microscopy. Cell 90, 523-535.
37. Henry, J.M. (1998). Neurons and nobel-prizes - A centennial history of neuropathology. Neurosurgery 42, 143-155.
38. Heuser, J., and Evans, L. (1980). Three-dimensional visualization of coated vesicle formation in fibroblasts. J. Cell Biol. 84, 560-583.
39. Heuser, J.E., and Reese.t.s. (1973). Evidence for recycling of synaptic vesicle membrane during neurotransmitter release at the frog neuromuscular junction. J. Cell Biol. 57, 315-344.
40. Hirst, J., and Robinson, M.S. (1998). Clathrin and adaptors. Biochim. Biophys. Acta 1404, 173-193.
41. Jamieson, J.D., and Palade, G.E. (1967). Intracellular transport of secretory proteins in the pancreatic exocrine cell. II. Transport to condensing vacuoles and zymogen granules. J. Cell Biol. 34, 597-615.
42. Jamieson, J.D., and Palade, G.E. (1971). Condensing vacuole conversion and zymogen granule discharge in pancreatic exocrine cells: Metabolic studies. J. Cell Biol. 48, 503-522.
43. Jareb, M.,and Banker, G. (1998). The polarized sorting of membrane proteins expressed in cultured hippocampal neurons using viral vectors. Neuron 20, 855-867.
44. Kanaseki, T., and Kadota, K. (1969). The "vesicle in a basket." A morphological study of the coated vesicle isolated from the nerve endings of the guinea pig brain, with special reference to the mechanism of membrane movements. J. Cell Biol. 42, 202-220.
45. Koehler, C.M., Merchant, S., and Schatz, G. (1999). How membrane proteins travel across the mitochondrial intermembrane space. Trends Biochem. Sci. 24, 428-432.
46. Kornfeld, S., and Mellman, I. (1989). The biogenesis of lysosomes. Annu. Rev. Cell Biol. 5, 483-525.
47. Kosaka, T., and Ikeda, K. (1983). Reversible blockage of membrane retrieval and endocytosis in the garland cell of the temperature-sensitive mutant of Drosophila melanogaster, shibire. J. Cell Biol. 97, 499-507.
48. Kuehn, M.J., Herrmann, J.M., and Schekman, R. (1998). COPII-cargo interactions direct protein sorting into ER-derived transport vesicles. Nature 391, 187-190.
49. Letourneur, F., Gaynor, E.C., Hennecke, S., Demolliere, C., Duden, R., Emr, S.D., Riezman, H., and Cosson, P. (1994). Coatomer is essential for retrieval of dilysine-tagged proteins to the endoplasmic-reticulum. Cell 79, 1199-1207.
50. Lodish, H.F., Braell, W.A., Schwartz, A.L., Strous, G.J., and Zilberstein, A. (1981). Synthesis and assembly of membrane and organelle proteins. Int. Rev. Cytol. Suppl. 12, 247-307.
51. Lyman, S.K., and Schekman, R. (1996). Polypeptide translocation machinery of the yeast endoplasmic reticulum. Experientia 52, 1042-1049.
52. Malhotra, V., Serafini, T., Orci, L., Shepherd, J.C., and Rothman, J.E. (1989). Purification of a novel class of coated vesicles mediating biosynthetic protein transport through the golgi stack. Cell 58, 329-336.
53. Marsh, M., and McMahon, HT. (1999). The structural era of endocytosis. Science 285, 215-220.
54. Martinez-Menarguez, J.A., Geuze, HJ., Slot, J.W., and Klumperman, J. (1999). Vesicular tubular clusters between the ER and Golgi mediate concentration of soluble secretory proteins by exclusion from COPI-coated vesicles. Cell 98, 81-90.
55. Matter, K., and Mellman, I. (1994). Mechanisms of cell polarity: Sorting and transport in epithelial cells. Curr. Opin. Cell Biol. 6, 545-554.
56. May, T., and Soll, J. (1999). Chloroplast precursor protein translocon. FEBS Lett. 452, 52-56.
57. Mayer, A., Wickner, W., and Haas, A. (1996). Sec18p (NSF)-driven release of Sec17p (α-SNAP) can precede docking and fusion of yeast vacuoles. Cell 85, 83-94.
58. Mayorga, L.S., Diaz, R., and Stahl, P.D. (1989). Regulatory role for GTP-binding proteins in endocytosis. Science 244, 1475-1477.
59. Mellman, I. (1996). Endocytosis and molecular sorting. Annu. Rev. Cell Dev. Biol. 12, 575-625.
60. Mellman, I., Fuchs, R., and Helenius, A. (1986). Acidification of the endocytic and exocytic pathways. Annu. Rev. Biochem 55, 663-700.
61. Merisko, E.M., Fletcher, M., and Palade, G.E. (1986). The reorganization of the Golgi complex in anoxic pancreatic acinar cells. Pancreas 1, 95-109.
62. Metchnikoff, E. (1887). Sur la lutte des cellules de l'organisme cintre l'invasion des microbes. Ann. Inst. Pasteur 1, 321-326.
63. Montecucco, C., and Schiavo, G. (1995). Structure and function of tetanus and botulinum neurotoxins. Q. Rev. Biophys. 28, 423-472.
64. Nelson, W.J., and Veshnock, P.J. (1987). Ankyrin binding to (Na+ + K+)ATPase and implications for the organization of membrane domains in polarized cells. Nature 328, 533-536.
65. Neupert, W. (1997). Protein import into mitochondria. Annu. Rev. Biochem. 66, 863-917.
66. Nichols, B.J., and Pelham, H.R. (1998). SNAREs and membrane fusion in the Golgi apparatus. Biochim. Biophys. Acta 1404, 9-31.
67. Nilsson, T., and Warren, G. (1994). Retention and retrieval in the endoplasmic-reticulum and the Golgi-apparatus. Curr. Opin. Cell Biol. 6, 517-521.
68. Nishimura, N., and Balch, W.E. (1997). A di-acidic signal required for selective export from the endoplasmic reticulum. Science 277, 556-558.
69. Novick, P., and Zerial, M. (1997). The diversity of Rab proteins in vesicle transport. Curr. Opin. Cell Biol. 9, 496-504.
70. Novick, P., Field, C., and Schekman, R. (1980). Identification of 23 complementation groups required for post-translational events in the yeast secretory pathway. Cell 21, 205-215.
71. Oprins, A., Duden, R., Kreis, T.E., Geuze, H.J., and Slot, J.W. (1993). β-COP localizes mainly to the cis-Golgi side in exocrine pancreas. J. Cell Biol. 121, 49-59.
72. Orci, L., Halban, P., Amherdt, M., Ravazzola, M., Vassalli, J.D., and Perrelet, A. (1984). Aclathrin-coated, Golgi-related compartment of the insulin secreting cell accumulates proinsulin in the presence of monensin. Cell 39, 39-47.
73. Orci, L., Stamnes, M., Ravazzola, M., Amherdt, M., Perrelet, A., Söllner, T.H., and Rothman, J.E. (1997). Bidirectional transport by distinct populations of COPI-coated vesicles. Cell 90, 335-349.
74. Palade, G. (1975). Intracellular aspects of the process of protein synthesis. Science 189, 347-358.
75. Pearse, B.M. (1975). Coated vesicles from pig brain: Purification and biochemical characterization. J. Mol. Biol. 97, 93-98.
76. Pelham, H.R.B. (1996). The dynamic organization of the secretory pathway. Cell Struct. Funct. 21, 413-419.
77. Pfeffer, S.R. (1996). Transport vesicle docking: SNAREs and associates. Annu. Rev. Cell Dev. Biol. 12, 441-461.
78. Pfeffer, S.R. (1999). Transport-vesicle targeting: Tethers before SNAREs. Nat. Cell Biol. 1, E17-E22.
79. Presley, J.F., Cole, N.B., Schroer, T.A., Hirschberg, K., Zaal, K.J.M., and Lippincott-Schwartz, J. (1997). ER-to-Golgi transport visualized in living cells. Nature 389, 81-85.
80. Rongo, C., Whitfield, C.W., Rodal, A., Kim, S.K., and Kaplan, J.M. (1998). LIN-10 is a shared component of the polarized protein localization pathways in neurons and epithelia. Cell 94, 751-759.
81. Roth, T.F., and Porter, K.R. (1964). Yolk protein uptake in the oocyte of the mosquito Aedes aegypti L. J. Cell Biol. 20, 313-332.
82. Rothman, J.E. (1994). Mechanisms of intracellular protein transport. Nature 372, 55-63.
83. Sabatini, D.D., Bensch, K., and Barrnett, R.J. (1963). Cytochemistry and electron microscopy: The preservation of cellular ultrastructure and enzymatic activity by aldehyde fixation. J. Cell Biol. 17, 19-58.
84. Sacher, M., Jiang, Y., Barrowman, J., Scarpa, A., Burston, J., Zhang, L., Schieltz, D., Yates, J.R., III, Abeliovich, H., and Ferro-Novick, S. (1998). TRAPP, a highly conserved novel complex on the cis-Golgi that mediates vesicle docking and fusion. EMBO J. 17, 2494-2503.
85. Salminen, A., and Novick, P.J. (1987). A ras-like protein is required for a post-Golgi event in yeast secretion. Cell 49, 527-538.
86. Sigler, P.B., Xu, Z., Rye, H.S., Burston, S.G., Fenton, W.A., and Norwich, A.L. (1998). Structure and function inGroEL-mediated protein folding. Annu. Rev. Biochem. 67, 581-608.
87. Simons, K. (1993). Biogenesis of epithelial cell surface polarity. Harvey Lect. 89, 125-146.
88. Simons, K., and Ikonen, E. (1997). Functional rafts in cell membranes. Nature 387, 569-572.
89. Singer, S.J., and Nicolson, G.L. (1972). The fluid mosaic model of the structure of cell membranes. Cell membranes are viewed as two-dimensional solutions of oriented globular proteins and lipids. Science 175, 720-731.
90. Skehel, J.J., and Wiley, D.C. (1998). Coiled coils in both intracellular vesicle and viral membrane fusion. Cell 95, 871-874.
91. Slot, J.W., and Geuze, H.J. (1983). Immunoelectron microscopic exploration of the Golgi complex. J. Histochem. Cytochem. 31, 1049-1056.
92. Söllner, T., Whitehall, S.W., Brunner, M., Erdjument-Bromage, H., Geromanos, S., Tempst, P., and Rothman, J.E. (1993). SNAP receptors implicated in vesicle targeting and fusion. Nature 362, 318-324.
93. Springer, S., and Schekman, R. (1998). Nucleation of COPII vesicular coat complex by endoplasmic-reticulum to Golgi vesicle SNAREs. Science 281, 698-700.
94. Springer, S., Spang, A., and Schekman, R. (1999). A primer on vesicle budding. Cell 97, 145-148.
95. Steinman, R.M., Brodie, S.E., and Cohn, Z.A. (1976). Membrane flow during pinocytosis. A stereologic analysis. J. Cell Biol. 68, 665-687.
96. Stent, G. (1969). The Coming of the Golden Age: A View of the End of Progress. (Garden City, NY: Natural History Press).
97. Subramani, S. (1998). Components involved in peroxisome import, biogenesis, proliferation, turnover, and movement. Physiol. Rev. 78, 171-188.
98. Sutton, R.B., Fasshauer, D., Jahn, R., and Brunger, A.T. (1998). Crystal structure of a SNARE complex involved in synaptic exocytosis at 2.4 Å resolution. Nature 395, 347-353.
99. Takei, K., McPherson, P.S., Schmid, S.L., and De Camilli, P. (1995). Tubular membrane invaginations coated by dynamin rings are induced by GTPγS in nerve terminals. Nature 374, 186-190.
100. Terbush, D.R., Maurice, T., Roth, D., and Novick, P. (1996). The exocyst is a multiprotein complex required for exocytosis in Saccharomyces cerevisiae. EMBO J. 15, 6483-6494.
101. Thiele, C., and Huttner, W.B. (1998). Protein and lipid sorting from the trans-Golgi network to secretory granules - Recent developments. Semin. Cell Dev. Biol. 9, 511-516.
102. Tisdale, E.J., Plutner, H., Matteson, J., and Balch, W.E. (1997). p53/ 58 binds COPI and is required for selective transport through the early secretory pathway. J. Cell Biol. 137, 581-593.
103. Tooze, J., and Tooze, S.A. (1986). Clathrin-coated vesicular transport of secretory proteins during the formation of ACTH-containing secretory granules in AtT20 cells. J. Cell Biol. 103, 839-850.
104. Trimble, W.S., Cowan, D.M., and Scheller, R.H. (1988). VAMP-1: A synaptic vesicle-associated integral membrane protein. Proc. Natl. Acad. Sci. USA 85, 4538-4542.
105. Warren, G., and Mellman, I. (1999). Bulkflow redux? Cell 98, 125-127.
106. Weber, T., Zemelman, B.V., McNew, J.A., Westermann, B., Gmachl, M., Parlati, F., Söllner, T.H., and Rothman, J.E. (1998). SNAREpins: Minimal machinery for membrane fusion. Cell 92, 759-772.
107. Whitney, J.A., Gomez, M., Sheff, D., Kreis, T.E., and Mellman, I. (1995). Cytoplasmic coat proteins involved in endosome function. Cell 83, 703-713.
108. Wurmser, A.E., and Emr, S.D. (1998). Phosphoinositide signaling and turnover: Ptdlns(3)P, a regulator of membrane traffic, is transported to the vacuole and degraded by a process that requires lumenal vacuolar hydrolase activities. EMBO J. 17, 4930-4942.