Biosynthesis of poly(3-Hydroxybutyrate) and poly(3-Hydroxybutyrate-co-3-Hydroxyvalerate) and its regulation in bacteria

Mikrobiologiya

Volumn 69, Issue 6, 2000, Pages 753-763

  Trotsenko, Yu A ^a   Belova, L L ^a  

^a SKRYABIN INSTITUTE OF BIOCHEMISTRY AND PHYSIOLOGY OF MICROORGANISMS   (Russian Federation)

Author keywords

[No Author keywords available]

Indexed keywords

POLY(3 HYDROXYBUTYRATE) CO (3 HYDROXYVALERATE); POLY(3-HYDROXYBUTYRATE)-CO-(3-HYDROXYVALERATE); POLYESTER;

BACTERIUM; METABOLISM; REVIEW;

BACTERIA; POLYESTERS;

EID: 0034327012     PISSN: 00263656     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (75)

1. Anderson AJ., Dawes E A. Occurrence, metabolism, metabolic role, and industrial uses of bacterial polyhydroxyalkanoates // Microbiol. Rev. 1990. V. 54. P. 450-472
2. Steinbüchel A., Valentin H.E. Diversity of bacterial polyhydroxyalkanoic acids // FEMS Microbiol. Lett. 1995. V. 128. P. 219-228.
3. Steinbüchel A., Schlegel H.G. Physiology and molecular genetics of poly (β-hydroxyalkanoic acid) synthesis in Alcaligenes eutrophus // Mol. Microbiol. 1991. V. 5. P. 535-542.
4. Hahn S.K., Chang Y.K., Lee S.Y. Recovery and characterization of poly(3-hydroxybutyric acid), synthesized in Alcaligenes eutrophus and recombinant Escherichia colill Appl. Environ. Microbiol. 1995. V. 61. P. 34-39.
5. Leaf I.A., Peterson M.S., Stoup S.K., Somers D.A., Srienc F. Saccharomyces cerevisiae expressing bacterial polyhydroxybutyrate synthase produces PHB // Microbiology. 1996. V. 142. P. 1169-1180.
6. Poirier Y., Dennis D.E., Klomparens K., Somerville C. Polyhydroxybutyrate, a biodegradable thermoplastic, produced in transgenic plants //Science. 1992. V. 256. P. 520-523.
7. Wang F., Lee S. Y. Production of poly-β-hydroxybutyrate by fed-batch culture of filamentation-suppressed recombinant Escherichia coli II Appl. Environ. Microbiol. 1997. V. 63. P. 4765-4769.
8. Hahn JJ., Eschenlauer A.C., Narrol M.H., SomersDA., Srienc F. Growth kinetics, nutrient uptake, and expression of the Alcaligenes eutrophus poly (beta-hydroxybutyrate) synthesis pathway in transgenic maize cell suspension cultures // Biotechnol. Prog. 1997. V. 13. P. 347-354.
9. Kalousek S., Lubitz W. High-level poly (beta-hydroxybutyrate) production in recombinant Escheichia coli in sugar-free, complex medium // Can. J. Microbiol. 1995. V. 41. P. 216-221.
10. Slater S.C., Voige W.H., Dennis D.E. Cloning and expression in Escherichia coli of the Alcaligenes eutrophus PHB biosynthetic pathway genes // J. Bacteriol. 1988. V. 170. P. 4431-4436.
11. Kidwell J., Valentin H.E., Dennis D. Regulated expression of the Alcaligenes eutrophus pha biosynthesis genes in Escherichia coli II Appl. Environ. Microbiol. 1995. V. 61. P. 1391-1398.
12. Trotsenko Y A., Doronina N.V., Sokolov A.P., Ostafin M. Synthesis of polyhydroxybutyrate by methylotrophic bacteria//FEMS Microbiol. Lett. 1993. V. 103. P. 393-394.
13. Yamane T. Yield of poly-D(-)-3-hydroxybutyrate from various carbon sources: a theoretical study // Biotechnol. Bioeng. 1993. V. 41. P. 165-170.
14. Bourque D., Pomerleau Y., Groleau D. High-cell-density production of poly-hydroxybutyrate (PHB) from methanol by Methylobacterium extorquens: production of high-molecular-mass PHB // Appl. Microbiol. Biotechnol. 1995. V. 44. P. 367-376.
15. Zhao S., Fan C., Hu X., Chen J., Feng H. The microbial production of polyhydroxybutyrate from methanol // Appl. Biochem. Biotechnol. 1993. V. 39. P. 191-199.
16. Suzuki T., Yamane T., Shimizu S. Mass production of poly-β-hydroxybutyric acid by fed-batch culture with controlled carbon/nitrogen feeding // Appl. Microbiol. Biotech. 1986. V. 24. P. 370-374.
17. Follner C.G., Muller S., Steinbüchel A., Babel W. Biosynthesis of poly-3-hydroxybutyric acid by the facultatively methanol-assimilating bacterium Mycoplana rubra B346 and recombinant strains // J. Basic Microbiol. 1995. V. 35. P. 179-188.
18. Veaa S., Matsumoto S., Takagi A., Yamane T. Synthesis of poly (3-hydroxybutyrate-co-3-hydroxyvalerate) from methanol and w-amyl alcohol by the methylotrophic bacteria Paracoccus denitrificans and Methylobacterium extorquens // Appl. Environ. Microbiol. 1992. V. 58. P. 3574-3579.
19. Doi Y., Segawa A., Kawaguchi Y., Kunioka M. Cyclic nature of poly (3-hydroxyalkanoate) metabolism in Alcaligenes eutrophus II FEMS Microbiol. Lett. 1990. V. 67. P. 165-170.
20. Moskowits GJ., MerrickJ.M. Metabolism of poly-β-hydroxybutyrate. II. Enzymatic synthesis of D-(-)-β-hydroxybutyryl coenzyme A by an enoyl hydratase from Rhodospirilium rubrum // Biochemistry. 1969. V. 8. P. 2748-2755.
21. Oeding V., Schlegel H. β-Ketothiolase from Hydrogenomonas eutropha H16 and its significance in the regulation of hydroxybutyrate metabolism // Biochem. J. 1973. V. 134. P. 239-248.
22. Haywood G.W., Anderson AJ., Chu L., Dawes E.A. Characterization of two 3-ketothiolases possessing differing substrate specificities in the polyhydroxyalkanoate synthesizing organism Alcaligenes eutrophus II FEMS Microbiol. Lett. 1988. V. 52. P. 91-96.
23. Slater S., Houmiel K.L., Tran M., Mitsky TA., Taylor N.B., PadgetteS.R., Gruys KJ. Multiple β-ketothiolases mediate of poly (3-hydroxyalkanoate) copolymer synthesis in Ralstonia eutropha II J. Bacteriol. 1998. V.180. P. 1979-1987.
24. Maekawa B., Koyama N., Doi Y. Purification and properties of 3-ketothiolase from Alcaligenes latus II Biotechnol. Lett. 1993. V. 15. P. 691-696.
25. Nishimura T., Saito T., Tomita K. Purification and properties of -ketothiolase from Zoogloea ramigera II Arch. Microbiol. 1978. V. 116. P. 21-27.
26. Davis J.T., Moore R.N., Imperiali B., Pratt AJ., KobayashiK., Masamune S.t SinskeyAJ., Walsh C.T. Biosynthetic thiolase from Zoogloea ramigera. I. Preliminary characterization and analysis of proton transfer reaction // J. Biol. Chem. 1987. V. 262. P. 82-89.
27. Peoples O.P., Masamune S., Sinskey AJ. Biosynthetic thiolase from Zoogloea ramigera. Isolation and characterization of the structural gene // J. Biol. Chem. 1987. V. 262. P. 97-102.
28. Ritchie G.A.F., Senior P.J., Dawes E A. The purification and characterization of acetoacetyl-coenzyme A reductase from Azotobacter beijerinckii // Biochem. J. 1971. V. 121. P. 309-316.
29. Haywood G.W., Anderson AJ., Chu L., Dawes E A. The role of NADH- and NADPH-linked acetoacetyl-CoA reductases in the polyhydroxyalkanoate synthesizing organism Alcaligenes eutrophus // FEMS Microbiol. Lett. 1988, V. 52. P. 91-96.
30. Shuto H., Fukui T., Saito T., Shirakura Y., Tomita K. An NAD-linked acetoacetyl-CoA reductase from Zoogloea ramigera I-16-M // Eur. J. Biochem. 1989. V. 118. P. 53-59.
31. Fukui T., Masaki J., Saito T., Tomita K. Purification and characterization of NADP-linked acetoacetyl-CaA reductase from Zoogloea ramigera I-16-M // Biochim. Biophys. Acta. 1987. V. 917. P. 365-371.
32. Mothes G., Babel W. Methylobacterium rhodesianum MB 126 possesses two stereospecific crotonyl-CoA hydratases // Can. J. Microbiol. 1995. V. 41. Suppl. 1 L. P. 68-72.
33. Mothes G., Babel W. Methylobacterium rhodesianum MB 126 possesses two acetoacetyl-CoA reductases // Arch. Microbiol. 1994. V. 161. P. 277-280.
34. Belova L.L., Sokolov A.P., Sidorov I.A., Trotsenko Y A. Purification and characterization of NADPH-dependent acetoacetyl-CoA reductase from Methylobacterium extorquens //FEMS Microbiol. Lett. 1997. V. 156. P. 275-279.
35. Haywood G.W., Anderson AJ., Dawes E A. The importance of PHB-synthase substrate specificity in PHA synthesis by Alcaligenes eutrophus // FEMS Microbiol. Lett. 1989. V. 57. P. 1-6.
36. Jossek R., Reichelt R., Steinbuchel A. In vitro biosynthesis of poly(3-hydroxybutyric acid) by using purified of poly (3-hydroxyalkanoic acid) synthase of Chromatium vinosum 1,1 Appl. Microbiol. Biotechnol. 1998. V. 49. P. 258-266.
37. Gerngros T.U., Reily P., Stubbe J., Sinskey AJ., Peoples O.P. Immunocytochemical analysis of poly-β-hy-droxybutyrate (PHB) synthase in Alcaligenes eutrophus H16: localization of the synthase enzyme at the surface of PHB granules //J. Bacteriol. 1993. V. 175. P. 5289-5293.
38. Gerngross T.U., Snell K.D., Peoples O.P., Sinskey A.J. Overexpression and purification of the soluble polyhydroxyalkanoate synthase from Alcaligenes eutrophus: evidence for a required posttranslational modification for catalytic activity // Biochemistry. 1994. V. 33. P. 9311-9320.
39. Liebergessel M., Sonomoto K., Madkour M., May er F., Steinbüchel A. Purification and characterization of the poly (hydroxyalkanoic acid) synthase from Chromatium vinosum and localization of the enzyme at the surface of poly (hydroxyalkanoic acid) granules // Eur. J. Biochem. 1994. V. 126. P. 71-80.
40. Miyake M., Kataoka K., Shirai M., Acada Y. Control of poly-β-hydroxybutyrate synthase mediated by acetyl phosphate in cyanobacteria // J. Bacteriol. 1997. V. 179. P. 5009-5013.
41. Henderson A.A., Jones C.W. Poly-3-hydroxybutyrate production by washed cells of Alcaligenes eutrophus: purification, characterization and potential regulatory role of citrate synthase // Arch. Microbiol. 1997. V. 168. P. 486-492.
42. Henderson R.A., Jones C.W. Physiology of poly-3-hydroxybutyrate (PHB) production by Alcaligenes eutrophus growing in continuous culture // Microbiology. 1997. V. 143. P. 2361-2371.
43. Steinbüchel A., Schlegel H,G. Excretion of pyruvate by mutants of Alcaligenes eutrophus, which are impaired in the accumulation of poly (β-hydroxyburyric acid) (PHB), under conditions permitting synthesis of PHB // Appl. Mkrobiol. Biotechnol. 1989. V. 31. P. 168-175.
44. Cook AM., Schlegel H.G. Metabolite concentrations in Alcaligenes eutrophus H16 and mutant defective in poly-β-hydroxybutyrate synthesis // Arch. Microbiol. 1978. V. 119. P. 231-235.
45. Mansfield DA., Anderson AJ., Naylor LA. Regulation of PHB metabolism in Alcaligenes eutrophus // Can. J. Microbiol. 1995. V. 41. Suppl. 1. P. 44-49.
46. Park J.-S., Lee Y.-H. Metabolic characteristics of isocitrate dehydrogenase leaky mutant of Alcaligenes eutrophus and its utilization for poly-β-hydroxybutyrate production // J. Ferment. Bioeng. 1996. V. 81. P. 197-205.
47. Lee Y., Kim M.K., Park Y.N., Lee S.Y. Regulatory effects of cellular nicotinamide nucleotides and enzyme activities on poly (3-hydroxybutyrate) synthesis in recombinant Escherichia coli //Biotechnol. Bioeng. 1996. V. 52. P. 707-712.
48. Senior P.J., Dawes E A. The regulation of poly-β-hydroxybutyrate metabolism in Azotobacter beijerinckii // Biochem. J. 1973. V. 134. P. 225-238.
49. Jackson FA., Dawes E.A. Regulation of the tricarboxylic acid cycle and poly-β-hydroxybutyrate metabolism in Azotobacter beijerinckii II J. Gen. Microbiol. 1976. V. 97. P. 303-312.
50. Pal S., Manna A., Paul A.R. Induction of encystment and poly-beta-hydroxybutyric acid production by Azotobacterchroococcum MAL-201 //Curr. Microbiol. 1997. V. 35. P. 327-330.
51. Lin L.P., SadoffHL. Encystment and polymer production by Azotobacter vinelandii in the presence of β-hydroxybutyrate// J. Bacteriol. 1968. V. 95. P. 2336-2343.
52. Page WJ., Knosp O. Hyperproduction of poly-β-hydroxybutyrate during exponential growth of Azotobacter vinelandii UWD // Appl. Environ. Microbiol. 1989. V. 55. P. 1334-1339.
53. Manchak J., Page W.J. Control of polyhydroxyalkanoate synthesis in Azotobacter vinelandii UWD // Microbiology. 1994. V. 140. P. 953-963.
54. Mothes G., Rivera I.S., Babel W. Competition between -ketothiolase and citrate synthase during PHB synthesis in Methylobacterium rhodesianum II Arch. Microbiol. 1997. V. 66. P. 405-410.
55. Mothes G., Ackermann J.-U., Babel W. Regulation of PHB synthesis in Methylobacterium rhodesianum MB 126 growing on methanol or fructose // Arch. Microbiol. 1998. V. 169. P. 360-363.
56. Ackermann J.-U., Babel W. Growth-associated synthesis of poly (hydroxybutyric acid) in Methylobacterium rhodesianum as an expression of an internal bottleneck // Appl. Microbiol. Biotechnol. 1997. V. 47. P. 144-149.
57. Breuer U., Ackermann J.-U., Babel W. Accumulation of poly (3-hydroxybutyric acid) and overproduction of exopolysaccharides in a mutant of a methylotrophic bacterium // Can. J. Microbiol. 1995. V. 41. Suppl. 1. P. 55-59.
58. 1 transfer enzymes and coenzymes linking methylotrophic bacteria and methanogenic Archaea II Science. 1998. V. 281. P. 99-102.
59. Vorholt JA., Chistoserdova L., Lidstrom ME., Thauer R.K. The NADP-dependent méthylène tetrahydromethanopterin dehydrogenase in Methylobacterium extorquens AMI //J. Bacteriol. 1998. V. 180. P. 5351-5356.
60. Schubert P., Steinbüchel A., Schlegel H.G. Cloning the Alcaligenes eutrophus genes for synthesis of poly-β-hydroxybutyrate acid (PHB) in Escherichia coli // J. Bacteriol. 1988. V. 170. P. 5837-5847.
61. Peoples O.P., Sinskey A.J. Poly-β-hydroxybutyrate biosynthesis in Alcaligenes eutrophus H16. Characterization of the genes encoding β-ketothiolase and acetoacetyl-CoA reductase // J. Biol. Chem. 1989. V. 264. P.15293-15297.
62. Peoples O.P., Sinskey AJ. Poly-β-hydroxybutyrate biosynthesis in Alcaligenes eutrophus H16. Identification and characterization of the PHB polymerase gene (phbC) II J. Biol. Chem. 1989. V. 264. P. 15298-15303.
63. Schubert P., Kruger N., Steinbüchel A. Molecular analysis of the Alcaligenes eutrophus poly-(3-hydroxybutyrate) biosynthetic operon: identification of the W-terminus of poly-(3-hydroxybutyrate) synthase and identification of the promoter // J. Bacteriol. 1991. V. 173. P. 168-175.
64. Schembri M.A., Bayly R.C., Davis J.K. Cloning and analysis of the polyhydroxyalkanoic acid synthase gene from anAcinetobacter sp.: evidence that the gene is both plasmid and chromosomally located // FEMS Microbiol. Lett. 1994. V. 118. P. 145-152.
65. Valentin H.E., Steinbüchel A. Cloning and characterization of the Methylobacterium extorquens polyhydroxyalkanoic synthase stuctural gene //Appl. Microbiol. Biotech. 1993. V. 39. P. 309-311.
66. Pieper U., Steinbüchel A. Identification, cloning and sequence analysis poly (3-hydroxyalkanoic acid) synthase gene of Rhodococcm ruber // FEMS Microbiol. Lett. 1992. V. 96. P. 73-80.
67. Peoples O.P., Sinskey A.J. Fine structural analysis of the Zoogloea ramigera phaAphaB locus encoding β-ketothiolase and acetoacetyl-CoA reductase: nucleotide sequence ofphaB //Mol. Microbiol. 1989. V. 3. P. 349-357.
68. Ueda S., Yabutani T., MaeharaA., Yamane T. Molecular analysis of poly (3-hydroxyalkanoate) synthase gene from Paracossus denitrificans II J. Bacteriol. 1996. V. 178. P. 774-779.
69. Yabutani T., Maehara A., Ueda S., Yamane T. Analysis of β-ketothiolase and acetoacetyl-CoA reductase genes of a methylotrophic bacterium, Paracossus denitrificans, and their expression in Escherichia coli II FEMS Microbiol. Lett. 1995. V. 133. P. 85-90.
70. Liebergessel M., Steinbüchel A. Cloning and nucleotide sequences of genes relevant for biosynthesis of poly (3-hydroxybutyrate) in Chromatium vinosum // Eur. J. Biochem. 1992. V. 209. P. 135-150.
71. Liebergessel M., Steinbüchel A. New knowledge about the PHA-locus and P(3HB) granule-associated proteins in Chromatium vinosum // Biotechnol. Lett. 1996. V. 18. P. 719-724.
72. Liebergessel M., Steinbüchel A. Cloning and molecular analysis of the poly (3-hydroxybutyric acid) biosynthetic genes of Thiocystis violacea II Appl. Microbiol. Biotechnol. 1993. V. 38. P. 493-501.
73. Tombolini R., Povolo S., Buson A., Squartini A., NutiM.P. Poly-beta-hydroxybutyrate (PHB) biosynthetic genes in Rhizobium meliloti 41 // Microbiology. 1995. V. 141. P. 2553-2559.
74. Hustede E., Steinbüchel A., Schlegel H.G. Cloning of poly(3-hydroxybutyric acid) synthase genes of Rhodobacter sphaeroides and Rhodospirillum rubrum and heterologous expression in Alcaligenes eutrophus II FEMS Microbiol. Lett. 1992. V. 71. P. 285-290.
75. Madison L.L., Huisman G.W. Metabolic engineering of poly (3-hydroxyalkanoates): from DNA to plastic // Microbiol. Mol. Biol. Rev. V. 63. No 1. P. 21-53.