Compactness, aggregation, and prionlike behavior of protein: a lattice model study

Journal of Chemical Physics

Volumn 113, Issue 12, 2000, Pages 5072-5077

  Giugliarelli, Gilberto ^a   Micheletti, Cristian ^b,c   Banavar, Jayanth R ^d   Maritan, Amos ^b,c  

^a UNIVERSITY OF UDINE   (Italy)

^b INFM   (Italy)

^c ABDUS SALAM INTERNATIONAL CENTRE FOR THEORETICAL PHYSICS   (Italy)

^d PENNSYLVANIA STATE UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

AGGLOMERATION; AMINO ACIDS; MATHEMATICAL MODELS; MOLECULAR STRUCTURE; SOLUBILITY;

COMPACTNESS; LATTICE MODEL; PRIONLIKE BEHAVIOR;

PROTEINS;

EID: 0034275017     PISSN: 00219606     EISSN: None     Source Type: Journal    
DOI: 10.1063/1.1289463     Document Type: Article

References (34)

1. C. Anfinsen, Science 181, 223 (1973).
2. C. Branden and J. Tooze, in Introduction to Protein Structure (Garland, New York, 1991); T. E. Creighton, in Proteins: Structures and Molecular Properties (Freeman, New York, 1992).
3. C. Branden and J. Tooze, in Introduction to Protein Structure (Garland, New York, 1991); T. E. Creighton, in Proteins: Structures and Molecular Properties (Freeman, New York, 1992).
4. P. G. Wolynes and W. A. Eaton, Phys. World 3, 39 (1990).
5. C. Micheletti, J. R. Banavar, A. Maritan, and F. Seno, Phys. Rev. Lett. 82, 3372 (1999).
6. D. K. Klimov and D. Thirumalai, J. Mol. Biol. 282, 471 (1998).
7. K. F. Lau and K. A. Dill, Macromolecules 22, 3986 (1989).
8. S. Miyazawa and R. L. Jernigan, Macromolecules 18, 534 (1985); J. Mol. Biol. 256, 623 (1996).
9. S. Miyazawa and R. L. Jernigan, Macromolecules 18, 534 (1985); J. Mol. Biol. 256, 623 (1996).
10. D. T. Jones, W. R. Taylor, and J. M. Thornton, Nature (London) 358, 86 (1992).
11. H. S. Chan and K. A. Dill, Proteins 24, 335 (1996).
12. J. D. Hirst, Protein Eng. 12, 721 (1999).
13. R. A. Broglia, G. Tiana, S. Pasquali, H. E. Roman, and E. Vigezzi, Proc. Natl. Acad. Sci. U.S.A. 95, 12930 (1998).
14. S. Istrail, R. Schwartz, and J. King, J. Comput. Biol. 6, 143 (1999).
15. P. Gupta, C. K. Hall, and A. C. Voegler, Protein Sci. 7, 2642 (1998).
16. S. Kamtekar, J. M. Schiffer, H. Xiong, J. M. Babik, and M. H. Hecht, Science 262, 1680 (1993).
17. S. B. Prusiner, Science 252, 1515 (1991).
18. S. B. Prusiner and S. J. DeArmond, Annu. Rev. Neurosci. 17, 311 (1994).
19. F. E. Cohen, K.-M. Pan, Z. Huang, M. Baldwin, R. Fletterick, and S. B. Prusiner, Science 264, 530 (1994).
20. P. M. Harrison, P. Bamborough, V. Daggett, S. B. Prusiner, and F. E. Cohen, Curr. Opin. Struct. Biol. 7, 53 (1997).
21. K.-M. Pan et al., Proc. Natl. Acad. Sci. U.S.A. 90, 10962 (1994).
22. P. M. Harrison, H. S. Chan, S. B. Prusiner, and F. E. Cohen, J. Mol. Biol. 286, 593 (1999).
23. B. H. Park and M. Levitt, J. Mol. Biol. 249, 493 (1995).
24. C. Micheletti, J. R. Banavar, A. Maritan, and F. Seno, Phys. Rev. Lett. 80. 5683 (1998).
25. D. G. Covell and R. Jernigan, Biochemistry 29, 3287 (1990).
26. E. S. Huang, S. Subbiah, and M. Levitt, J. Mol. Biol. 252, 709 (1995).
27. H. Li, C. Tang and N. Wingreen, Phys. Rev. Lett. 79, 765 (1997).
28. C. Micheletti, F. Seno, A. Maritan, and J. R. Banavar, Phys. Rev. Lett. 80, 2237 (1998).
29. C. Micheletti, A. Maritan, and J. R. Banavar, J. Chem. Phys. 110, 9730 (1999).
30. C. Micheletti, F. Seno, A. Maritan, and J. R. Banavar, Ann. Combinatorics 3, 39 (1999).
31. N. E. G. Buchler and R. A. Goldstein, Proteins 34, 113 (1999).
32. M. Cieplak, M. Henkel, J. Karbowski, and J. R. Banavar. Phys. Rev. Lett. 80, 3654 (1998).
33. M. R. Ejtehadi, N. Hamedani, and V. Shahrezaei, Phys. Rev. Lett. 82, 4723 (1990).
34. S. Lindquist, Cell 89, 495 (1997).