Protein design in a lattice model of hydrophobic and polar amino acids

Physical Review Letters

Volumn 80, Issue 10, 1998, Pages 2237-2240

  Micheletti, C ^a   Seno, F ^a   Maritan, A ^b   Banavar, J R ^c  

^a UNIVERSITY OF PADOVA   (Italy)

^b SISSA   (Italy)

^c PENNSYLVANIA STATE UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 0000823682     PISSN: 00319007     EISSN: 10797114     Source Type: Journal    
DOI: 10.1103/PhysRevLett.80.2237     Document Type: Article

References (27)

1. M. H. J. Cordes, A. R. Davidson, and R. T. Sauer, Curr. Opin. Struct. Biol. 6, 3–10 (1996).
2. Y. Kuroda, T. Nakai, and T. Ohkubo, J. Mol. Biol. 236, 862–868 (1994).
3. T. P. Quinn, N. B. Tweedy, R. W. Williams, J. S. Richardson, and D. C. Richardson, Proc. Natl. Acad. Sci. U.S.A. 91, 8747–8751 (1994).
4. A. Lombardi, J. W. Bryson, and W. F. DeGrado, Biopolym. Peptide Sci. 40, 495–504 (1997).
5. S. Kamtekar, J. M. Schiffer, H. Xiong, J. M. Babik, and M. H. Hecht, Science 262, 1680–1685 (1993).
6. K. Yue, K. M. Fiebig, P. D. Thomas, H. S. Chan, E. I. Shackhnovich, and K. A. Dill, Proc. Natl. Acad. Sci. U.S.A. 92, 325–329 (1995).
7. E. I. Shakhnovich and A. M. Gutin, Proc. Natl. Acad. Sci. U.S.A. 90, 7195–7199 (1993).
8. E. I. Shakhnovich, Phys. Rev. Lett. 72, 3907–3910 (1994).
9. K. Yue and K. A. Dill, Proc. Natl. Acad. Sci. U.S.A. 89, 4163–4167 (1992)
10. S. J. Sun, R. Brem, H. S. Chan, and K. A. Dill, Protein Eng. 8, 1205 (1995).
11. J. M. Deutsch and T. Kurosky, Phys. Rev. Lett. 76, 323–326 (1996).
12. F. Seno, M. Vendruscolo, A. Maritan, and J. R. Banavar, Phys. Rev. Lett. 77, 1901–1904 (1996).
13. M. P. Morrissey and E. I. Shakhnovich, Folding Des. 1, 391–405 (1996).
14. J. W. Ponder and F. M. Richards, J. Mol. Biol. 193, 775–791 (1987).
15. J. U. Bowie, R. Luthy, and D. Eisenberg, Science 253, 164–170 (1991).
16. C. Pabo, Nature (London) 301, 200 (1983).
17. K. F. Lau and K. A. Dill, Macromolecules 22, 3986–3997 (1989).
18. K. F. Lau and K. A. Dill, Proc. Natl. Acad. Sci. U.S.A. 87, 6388–6392 (1990).
19. H. S. Chan and K. A. Dill, J. Chem Phys. 95, 3775–3787 (1991).
20. K. A. Dill, S. Bromberg, S. Yue, K. Fiebig, K. M. Yee, P. D. Thomas, and H. S. Chan, Protein Sci. 4, 561–602 (1995).
21. J. N. Onuchic, P. G. Wolynes, and N. D. Socci, Proc. Natl. Acad. Sci. U.S.A. 92, 3626–3629 (1995).
22. C. J. Camacho and D. Thirumalai, Proc. Natl. Acad. Sci. U.S.A. 90, 6369–6372 (1993).
23. A. Sali, E. I. Shakhnovich, and M. Karplus, Nature (London) 369, 248–250 (1994).
24. J. Bryngelson, J. N. Onuchic, N. D. Socci, and P. G. Wolynes, Proteins Struct. Funct. Genet. 21, 167–195 (1995).
25. K. Yue and K. A. Dill, Proc. Natl. Acad. Sci. U.S.A. 92, 146–150 (1995).
26. K. Yue and K. A. Dill, Phys. Rev. E 48, 2267–2278 (1993).
27. H. Li, R. Helling, C. Tang, and N. Wingreen, Science 273, 666 (1996).