Prediction of the exon-intron structure by comparison of genomic sequences

Molecular Biology

Volumn 34, Issue 2, 2000, Pages 200-206

  Novichkov, P S ^a   Gelfand, M S ^a   Mironov, A A ^a  

^a STATE RESEARCH INSTITUTE OF GENETICS AND SELECTION OF INDUSTRIAL MICROORGANISMS   (Russian Federation)

Author keywords

Comparative analysis; Exon intron structure; Gene recognition; Genome

Indexed keywords

EUKARYOTA; HEXAPODA; NEMATODA; TAKIFUGU; VERTEBRATA;

EID: 0034147484     PISSN: 00268933     EISSN: None     Source Type: Journal    
DOI: 10.1007/BF02759640     Document Type: Article

References (13)

1. 1. Gelfand, M.S., Mironov, A.M., and Pevzner, P.A., Proc. Natl. Acad. Sci. USA, 1996, vol. 93, pp. 9061-9066.
2. 2. Mironov, A.M., Roytberg, M.A., Pevzner, P.A., and Gelfand, M.S., Genomics, 1998, vol. 51, pp. 332-339.
3. 3. Burset, M., and Guigo, R., Genomics, 1996, vol. 34, pp. 353-367.
4. 4. Ansari-Lari, M.A., Oeltjen, J.C., Schwartz, S., Zhang, Z., Muzny, D.M., Lu, J., Gorrell, J.H., Chinault, A.C., Belmont, J.W., Miller, W., and Gibbs, R.A., Genome Res., 1998, vol. 8, pp. 29-40.
5. 5. Thacker, C., Marra, M.A., Jones, A., Baillie, D.L., and Rose, A.M., Genome Res., 1999, vol. 9, pp. 348-359.
6. 6. Lipman, D.J., Nucleic Acids Res., 1997, vol. 25, pp. 3580-3583.
7. 7. Duret, L., and Bucher, P., Curr. Opin. Struct. Bio., 1997, vol. 7, pp. 399-406.
8. 8. Benson, D.A., Boguski, M.S., Lipman, D.J., Ostell, J., and Ouelette, B.F.F., Nucleic Acids Res., 1998, vol. 26, pp. 1-7.
9. 9. Breathnach, R. and Chambon, P., Annu. Rev. Biochem., 1981, vol. 50, pp. 349-383.
10. 10. Altschul, S.F., Boguski, M.S., Gish, W., and Wootton, J.C., Nature Genetics, 1994, vol. 6, pp. 119-129.
11. 11. Mushegian, A.R., Bassett, D.E., Jr., Boguski, M.S., Bork, P., and Koonin, E.V., Proc. Natl. Acad. Sci. USA, 1997, vol. 94, pp. 5831-5836
12. 12. Gelfand, M.S., Res. Microbiol, 1999, vol. 150(in press).
13. 13. Jurka, J., Klonowski, P., Dagman, V., and Pelton, P., Comput. Chem., 1996, vol. 20, pp. 119-121.