메뉴 건너뛰기




Volumn 7, Issue 2, 2000, Pages 258-264

Improved repetitive-element PCR fingerprinting of Salmonella enterica with the use of extremely elevated annealing temperatures

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL DNA;

EID: 0034009483     PISSN: 1071412X     EISSN: None     Source Type: Journal    
DOI: 10.1128/CDLI.7.2.258-264.2000     Document Type: Article
Times cited : (33)

References (37)
  • 1
    • 0028223556 scopus 로고
    • Polymerase chain reaction-mediated genotyping in microbial epidemiology
    • Arbeit, R. D., J. N. Maslow, and M. E. Mulligan. 1994. Polymerase chain reaction-mediated genotyping in microbial epidemiology. Clin. Infect. Dis. 18:1018-1019.
    • (1994) Clin. Infect. Dis. , vol.18 , pp. 1018-1019
    • Arbeit, R.D.1    Maslow, J.N.2    Mulligan, M.E.3
  • 4
    • 0030006927 scopus 로고    scopus 로고
    • Rapid genotyping of Escherichia coli O157 isolates by random amplification of polymorphic DNA
    • Birch, M., D. W. Denning, and D. Law. 1996. Rapid genotyping of Escherichia coli O157 isolates by random amplification of polymorphic DNA. Eur. J. Clin. Microbiol. Infect. Dis. 15:297-302.
    • (1996) Eur. J. Clin. Microbiol. Infect. Dis. , vol.15 , pp. 297-302
    • Birch, M.1    Denning, D.W.2    Law, D.3
  • 5
    • 0027137711 scopus 로고
    • Amplifying DNA with arbitrary oligonucleotide primers
    • Caetano-Anolles, G. 1993. Amplifying DNA with arbitrary oligonucleotide primers. PCR Methods Appl. 3:85-94.
    • (1993) PCR Methods Appl. , vol.3 , pp. 85-94
    • Caetano-Anolles, G.1
  • 6
    • 0029093804 scopus 로고
    • Sex in Escherichia coli does not disrupt the clonal structure of the population: Evidence from random amplified polymorphic DNA and restriction-fragment-length polymorphism
    • Desjardins, P., B. Picard, B. Kaltenbock, J. Elion, and E. Denamur. 1995. Sex in Escherichia coli does not disrupt the clonal structure of the population: evidence from random amplified polymorphic DNA and restriction-fragment-length polymorphism. J. Mol. Evol. 41:440-448.
    • (1995) J. Mol. Evol. , vol.41 , pp. 440-448
    • Desjardins, P.1    Picard, B.2    Kaltenbock, B.3    Elion, J.4    Denamur, E.5
  • 8
    • 0025272439 scopus 로고
    • New molecular techniques for microbial epidemiology and the diagnosis of infectious diseases
    • Eisenstein, B. I. 1990. New molecular techniques for microbial epidemiology and the diagnosis of infectious diseases. J. Infect. Dis. 161:595-602.
    • (1990) J. Infect. Dis. , vol.161 , pp. 595-602
    • Eisenstein, B.I.1
  • 9
    • 0342813028 scopus 로고    scopus 로고
    • Method to improve reliability of random-amplified polymorphic DNA markers
    • Gallego, F. J., and I. Martinez. 1997. Method to improve reliability of random-amplified polymorphic DNA markers. BioTechniques 23:663-664.
    • (1997) BioTechniques , vol.23 , pp. 663-664
    • Gallego, F.J.1    Martinez, I.2
  • 11
    • 0028835540 scopus 로고
    • Molecular epidemiology of infections due to Enterobacter aerogenes: Identification of hospital outbreak-associated strains by molecular techniques
    • Georghiou, P. R., R. J. Hamill, C. E. Wright, J. Versalovic, T. Koeuth, D. A. Watson, and R. Lupski. 1995. Molecular epidemiology of infections due to Enterobacter aerogenes: identification of hospital outbreak-associated strains by molecular techniques. Clin. Infect. Dis. 20:84-94.
    • (1995) Clin. Infect. Dis. , vol.20 , pp. 84-94
    • Georghiou, P.R.1    Hamill, R.J.2    Wright, C.E.3    Versalovic, J.4    Koeuth, T.5    Watson, D.A.6    Lupski, R.7
  • 12
    • 0027204781 scopus 로고
    • Development of species-specific DNA probes for Campylobacter jejuni, Campylobacter coli, and Campylobacter lari by polymerase chain reaction fingerprinting
    • Giesendorf, B. A. J., A. van Belkum, A. Koeken, H. Stegeman, M. H. C. Henkens, and J. van der Plas. 1993. Development of species-specific DNA probes for Campylobacter jejuni, Campylobacter coli, and Campylobacter lari by polymerase chain reaction fingerprinting. J. Clin. Microbiol. 31:1541-1546.
    • (1993) J. Clin. Microbiol. , vol.31 , pp. 1541-1546
    • Giesendorf, B.A.J.1    Van Belkum, A.2    Koeken, A.3    Stegeman, H.4    Henkens, M.H.C.5    Van Der Plas, J.6
  • 13
    • 0030221135 scopus 로고    scopus 로고
    • Repetitive and arbitrary primer DNA sequences in PCR-medicated fingerprinting of outbreak and sporadic isolates of Campylobacter jejuni
    • Iriarte, M. P., and R. J. Owen. 1996. Repetitive and arbitrary primer DNA sequences in PCR-medicated fingerprinting of outbreak and sporadic isolates of Campylobacter jejuni. FEMS Immunol. Med. Microbiol. 15:17-22.
    • (1996) FEMS Immunol. Med. Microbiol. , vol.15 , pp. 17-22
    • Iriarte, M.P.1    Owen, R.J.2
  • 14
    • 0031969701 scopus 로고    scopus 로고
    • Colonization with and acquisition of uropathogenic Escherichia coli strains as revealed by polymerase chain reaction-based detection
    • Johnson, J. R., and J. J. Brown. 1998. Colonization with and acquisition of uropathogenic Escherichia coli strains as revealed by polymerase chain reaction-based detection. J. Infect. Dis. 177:1120-1124.
    • (1998) J. Infect. Dis. , vol.177 , pp. 1120-1124
    • Johnson, J.R.1    Brown, J.J.2
  • 15
    • 0034095046 scopus 로고    scopus 로고
    • Improved repetitive-element PCR fingerprinting for resolving pathogenic and nonpathogenic phylogenetic groups within Escherichia coli
    • 14a. Johnson, J. R., and T. T. O'Bryan. 2000. Improved repetitive-element PCR fingerprinting for resolving pathogenic and nonpathogenic phylogenetic groups within Escherichia coli. Clin. Diagn. Lab. Immunol. 7:265-273.
    • (2000) Clin. Diagn. Lab. Immunol. , vol.7 , pp. 265-273
    • Johnson, J.R.1    O'Bryan, T.T.2
  • 17
    • 0030926863 scopus 로고    scopus 로고
    • Characteristics and prevalence within serogroup O4 of a J96-like clonal group of uropathogenic Escherichia coli O4:H5 containing the class I and class III alleles of papG
    • Johnson, J. R., A. E. Stapleton, T. A. Russo, F. S. Scheutz, J. J. Brown, and J. N. Maslow. 1997. Characteristics and prevalence within serogroup O4 of a J96-like clonal group of uropathogenic Escherichia coli O4:H5 containing the class I and class III alleles of papG. Infect. Immun. 65:2153-2159.
    • (1997) Infect. Immun. , vol.65 , pp. 2153-2159
    • Johnson, J.R.1    Stapleton, A.E.2    Russo, T.A.3    Scheutz, F.S.4    Brown, J.J.5    Maslow, J.N.6
  • 19
    • 0027323326 scopus 로고
    • Molecular epidemiology and its clinical application
    • Lupski, J. R. 1993. Molecular epidemiology and its clinical application. JAMA 270:1363-1364.
    • (1993) JAMA , vol.270 , pp. 1363-1364
    • Lupski, J.R.1
  • 20
    • 0029039869 scopus 로고
    • Arbitrarily primed PCR DNA fingerprinting of Escherichia coli O157:H7 strains by using templates from boiled cultures
    • Madico, G., N. S. Akopyants, and D. E. Berg. 1995. Arbitrarily primed PCR DNA fingerprinting of Escherichia coli O157:H7 strains by using templates from boiled cultures. J. Clin. Microbiol. 33:1534-1536.
    • (1995) J. Clin. Microbiol. , vol.33 , pp. 1534-1536
    • Madico, G.1    Akopyants, N.S.2    Berg, D.E.3
  • 21
    • 0343376081 scopus 로고    scopus 로고
    • Genetic typing methods applied to the differentiation of clonal lines among Salmonella enterica serogroup G strains causing human salmonellosis
    • Martin, M. C., M. A. Gonzalez-Hevia, I. Moro, and M. C. Mendoza. 1997. Genetic typing methods applied to the differentiation of clonal lines among Salmonella enterica serogroup G strains causing human salmonellosis. FEMS Immunol. Med. Microbiol. 19:215-221.
    • (1997) FEMS Immunol. Med. Microbiol. , vol.19 , pp. 215-221
    • Martin, M.C.1    Gonzalez-Hevia, M.A.2    Moro, I.3    Mendoza, M.C.4
  • 24
    • 0001292973 scopus 로고
    • Genetic structure and variation in natural populations of Escherichia coli
    • F. C. Neidhardt, K. L. Ingraham, B. Magasanik, K. B. Low, M. Schaechter, and H. E. Umbarger (ed.), American Society for Microbiology, Washington, D.C.
    • Selander, R. K., D. A. Caugant, and T. S. Whittam. 1987. Genetic structure and variation in natural populations of Escherichia coli, p. 1625-1648. In F. C. Neidhardt, K. L. Ingraham, B. Magasanik, K. B. Low, M. Schaechter, and H. E. Umbarger (ed.), Escherichia coli and Salmonella typhimurium: cellular and molecular biology. American Society for Microbiology, Washington, D.C.
    • (1987) Escherichia Coli and Salmonella Typhimurium: Cellular and Molecular Biology , pp. 1625-1648
    • Selander, R.K.1    Caugant, D.A.2    Whittam, T.S.3
  • 25
    • 0022625897 scopus 로고
    • Genetic relationships and clonal structure of strains of Escherichia coli causing neonatal septicemia and meningitis
    • Selander, R. K., T. K. Korhonen, V. Väisänen-Rhen, P. H. Williams, P. E. Pattison, and D. A. Caugant. 1986. Genetic relationships and clonal structure of strains of Escherichia coli causing neonatal septicemia and meningitis. Infect. Immun. 52:213-222.
    • (1986) Infect. Immun. , vol.52 , pp. 213-222
    • Selander, R.K.1    Korhonen, T.K.2    Väisänen-Rhen, V.3    Williams, P.H.4    Pattison, P.E.5    Caugant, D.A.6
  • 26
    • 0029968082 scopus 로고    scopus 로고
    • Validation of use of whole-cell repetitive extragenic palindromic sequence-based PCR (REP-PCR) for typing strains belonging to the Acinetobacter calcoaceticus-Acinetobacter baumannii complex and application of the method to the investigation of a hospital outbreak
    • Snelling, A. M., P. Gerner-Smidt, P. M. Hawkey, J. Heritage, P. Parnell, C. Porter, A. R. Bodenham, and T. Inglis. 1996. Validation of use of whole-cell repetitive extragenic palindromic sequence-based PCR (REP-PCR) for typing strains belonging to the Acinetobacter calcoaceticus-Acinetobacter baumannii complex and application of the method to the investigation of a hospital outbreak. J. Clin. Microbiol. 34:1193-1202.
    • (1996) J. Clin. Microbiol. , vol.34 , pp. 1193-1202
    • Snelling, A.M.1    Gerner-Smidt, P.2    Hawkey, P.M.3    Heritage, J.4    Parnell, P.5    Porter, C.6    Bodenham, A.R.7    Inglis, T.8
  • 28
    • 0029050037 scopus 로고
    • Amplification methods for epidemiologic investigations of infectious diseases
    • Swaminathan, B., and T. J. Barrett. 1995. Amplification methods for epidemiologic investigations of infectious diseases. J. Microbiol. Methods 23: 129-139.
    • (1995) J. Microbiol. Methods , vol.23 , pp. 129-139
    • Swaminathan, B.1    Barrett, T.J.2
  • 29
    • 0026736251 scopus 로고
    • Degenerative oligonucleotide-primed PCR: General amplification of target DNA by a single degenerate primer
    • Telenius, H., N. P. Carter, C. E. Bebb, M. Nordenskjold, B. A. Ponder, and A. Tunnacliffe. 1992. Degenerative oligonucleotide-primed PCR: general amplification of target DNA by a single degenerate primer. Genomics 13: 718-725.
    • (1992) Genomics , vol.13 , pp. 718-725
    • Telenius, H.1    Carter, N.P.2    Bebb, C.E.3    Nordenskjold, M.4    Ponder, B.A.5    Tunnacliffe, A.6
  • 30
    • 0027408486 scopus 로고
    • Comparison of phage typing and DNA fingerprinting by polymerase chain reaction for discrimination of methicillin-resistant Staphylococcus aureus strains
    • van Belkum, A., R. Bax, P. Peerbooms, W. H. F. Goessens, N. van Leeuwen, and W. G. V. Quint. 1993. Comparison of phage typing and DNA fingerprinting by polymerase chain reaction for discrimination of methicillin-resistant Staphylococcus aureus strains. J. Clin. Microbiol. 31:798-803.
    • (1993) J. Clin. Microbiol. , vol.31 , pp. 798-803
    • Van Belkum, A.1    Bax, R.2    Peerbooms, P.3    Goessens, W.H.F.4    Van Leeuwen, N.5    Quint, W.G.V.6
  • 31
    • 0028223556 scopus 로고
    • Polymerase chain reaction-mediated genotyping in microbial epidemiology
    • van Belkum, A., and J. Meis. 1994. Polymerase chain reaction-mediated genotyping in microbial epidemiology. Clin. Infect. Dis. 18:1017-1018.
    • (1994) Clin. Infect. Dis. , vol.18 , pp. 1017-1018
    • Van Belkum, A.1    Meis, J.2
  • 32
    • 0027317259 scopus 로고
    • Typing of Legionella pneumophila strains by polymerase chain reaction-mediated DNA fingerprinting
    • van Belkum, A., M. Struelens, and W. Quint. 1993. Typing of Legionella pneumophila strains by polymerase chain reaction-mediated DNA fingerprinting. J. Clin. Microbiol. 31:2198-2200.
    • (1993) J. Clin. Microbiol. , vol.31 , pp. 2198-2200
    • Van Belkum, A.1    Struelens, M.2    Quint, W.3
  • 33
    • 0027992990 scopus 로고
    • Genomic fingerprinting of bacteria using repetitive sequence-based polymerase chain reaction
    • Versalovic, J., M. Schneid, F. J. de Bruijn, and J. R. Lupski. 1994. Genomic fingerprinting of bacteria using repetitive sequence-based polymerase chain reaction. Methods Mol. Cell. Biol. 5:25-40.
    • (1994) Methods Mol. Cell. Biol. , vol.5 , pp. 25-40
    • Versalovic, J.1    Schneid, M.2    De Bruijn, F.J.3    Lupski, J.R.4
  • 34
    • 0022775046 scopus 로고
    • Molecular epidemiology of bacterial infections: Examples of methodology and of investigations of outbreaks
    • Wachsmuth, K. 1986. Molecular epidemiology of bacterial infections: examples of methodology and of investigations of outbreaks. Rev. Infect. Dis. 8: 682-692.
    • (1986) Rev. Infect. Dis. , vol.8 , pp. 682-692
    • Wachsmuth, K.1
  • 35
    • 0025633560 scopus 로고
    • Fingerprinting genomes using PCR with arbitrary primers
    • Welsh, J., and M. McClelland. 1990. Fingerprinting genomes using PCR with arbitrary primers. Nucleic Acids Res. 18:7213-7218.
    • (1990) Nucleic Acids Res. , vol.18 , pp. 7213-7218
    • Welsh, J.1    McClelland, M.2
  • 37
    • 0026787243 scopus 로고
    • Analysis of relationships among isolates of Citrobacter diversus by using DNA fingerprints generated by repetitive sequence-based primers in the polymerase chain reaction
    • Woods, C. R., J. Versalovic, T. Koeuth, and J. R. Lupski. 1992. Analysis of relationships among isolates of Citrobacter diversus by using DNA fingerprints generated by repetitive sequence-based primers in the polymerase chain reaction. J. Clin. Microbiol. 30:2921-2929.
    • (1992) J. Clin. Microbiol. , vol.30 , pp. 2921-2929
    • Woods, C.R.1    Versalovic, J.2    Koeuth, T.3    Lupski, J.R.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.