A genetic map of tomato based on BC1 Lycopersicon esculentum x Solanum lycopersicoides reveals overall synteny but suppressed recombination between these homeologous genomes

Genetics

Volumn 154, Issue 2, 2000, Pages 857-867

  Chetelat, Roger T ^a   Meglic, Vladimir ^b   Cisneros, Pedro ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b AGRICULTURAL INSTITUTE OF SLOVENIA   (Slovenia)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; CHROMOSOME 10; CHROMOSOME 2; CHROMOSOME 5; CHROMOSOME 6; CHROMOSOME 9; GENE MAPPING; GENE SEGREGATION; GENETIC RECOMBINATION; GENOME; NONHUMAN; PRIORITY JOURNAL; SYNTENY; TOMATO;

CROSSES, GENETIC; GENETIC MARKERS; GENOME, PLANT; LINKAGE (GENETICS); LYCOPERSICON ESCULENTUM; POLYMORPHISM, RESTRICTION FRAGMENT LENGTH; RECOMBINATION, GENETIC;

EMBRYOPHYTA; LYCOPERSICON ESCULENTUM; SOLANUM; SOLANUM LYCOPERSICOIDES;

EID: 0033953860     PISSN: 00166731     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (52)

1. AFIFY, A., 1933 The cytology of the hybrid between Lycopersicon esculentum and L. racemigerum in relation to its parents. Genetica 15: 225-240.
2. AHN, S., and S. D. TANKSLEY, 1993 Comparative linkage maps of the rice and maize genomes. Proc. Natl. Acad. Sci. USA 90: 7980-7984.
3. AHN, S., J. A. ANDERSON, M. E. SORRELLS and S. D. TANKSLEY, 1993 Homoeologous relationships of rice, wheat and maize chromosomes. Mol. Gen. Genet. 241: 483-490.
4. BEGUN, D. J., and C. F. AQUADRO, 1992 Levels of naturally occurring DNA polymorphism correlate with recombination rates in D. melanogaster. Nature 356: 519-520.
5. BERNACCHI, D., and S. D. TANKSLEY, 1997 An interspecific backcross of Lycopersicon esculentum × L. hirsutum: linkage analysis and a QTL study of sexual compatibility factors and floral traits. Genetics 147: 861-877.
6. BOURNIVAL, B. L., C. E. VALLEJOS and J. W. SCOTT, 1988 Two new enzyme loci for chromosome 1. Rep. Tomato Genet. Coop. 38: 10-11.
7. CHETELAT, R. T., and J. W. DEVERNA, 1993 Map location of Malate dehydrogenase-1 (Mdh-1), a new marker for 3L. Rep. Tomato Genet. Coop. 43: 13.
8. CHETELAT, R. T., and V. MEGLIC, 1999 Molecular mapping of chromosome segments introgressed from Solanum lycopersicoides into cultivated tomato (Lycopersicon esculentum). Theor. Appl. Genet. (in press).
9. CHETELAT, R. T., C. M. RICK and J. W. DEVERNA, 1989 Isozyme analysis, chromosome pairing, and fertility of Lycopersicon esculentum × Solanum lycopersicoides diploid backcross hybrids. Genome 32: 783-790.
10. CHETELAT, R. T., M. TAKAHASHI and J. W. DEVERNA, 1993 Map location of Diaphorase-3 (Dia-3), a new isozyme marker on 9S. Rep. Tomato Genet. Coop. 43: 10.
11. CHETELAT, R. T., P. CISNEROS, L. STAMOVA and C. M. RICK, 1997 A male-fertile Lycopersicon esculentum × Solamon lycopersicoides hybrid enables direct backcrossing to tomato at the diploid level. Euphytica 95: 99-108.
12. CHETELAT, R. T., C. M. RICK, P. CISNEROS, K. B. ALPERT and J. W. DEVERNA, 1998 Identification, transmission, and cytological behavior of Solanum lycopersicoides Dun. monosomic alien addition lines in tomato (Lycopersicon esculentum Mill.). Genome 41: 40-50.
13. CHETELAT, R. T., D. F. ADAMS and D. O. ADAMS, 1999 Mae-1, a malic enzyme coding gene on chromosome 5. Rep. Tomato Genet. Coop. 49: 12-13.
14. CORRELL, D. S., 1962 The Potato and Its Wild Relatives. Contributions from the Texas Research Foundation, Renner, Texas. Botanical Studies 4: 1-606.
15. DE VICENTE, M. C., and S. D. TANKSLEY, 1991 Genome-wide reduction in recombination of backcross progeny derived from male versus female gametes in an interspecific backcross of tomato. Theor. Appl. Genet. 83: 173-178.
16. FARIS, J. D., B. LADDOMADA and B. S. GILL, 1998 Molecular mapping of segregation distortion loci in Aegilops tauschii. Genetics 149: 319-327.
17. FULTON, T. M., J. C. NELSON and S. D. TANKSLEY, 1997 Introgression and DNA marker analysis of Lycopersicon peruvianum, a wild relative of the cultivated tomato, into Lycopersicon esculentum, followed through three successive backcross generations. Theor. Appl. Genet. 95: 895-902.
18. GANAL, M. W., and S. D. TANKSLEY, 1996 Recombination around the Tm2a and Mi resistance genes in different crosses of Lycopersicon peruvianum. Theor. Appl. Genet. 92: 101-108.
19. GRADZIEL, T. M., and R. W. ROBINSON, 1989 Solanum lycopersicoides gene introgression to tomato, Lycopersicon esculentum, through the systematic avoidance and suppression of breeding barriers. Sex. Plant Reprod. 2: 43-52.
20. GRANDILLO, S., and S. D. TANKSLEY, 1996 Genetic analysis of RFLPs, GATA microsatellites and RAPDs in a cross between L. esculentum and L. pimpinellifolium. Theor. Appl. Genet. 92: 957-965.
21. KHUSH, G. S., and C. M. RICK, 1963 Meiosis in hybrids between Lycopersicon esculentum and Solanum pennellii. Genetica 33: 167-183.
22. KOSAMBI, D. D., 1944 The estimation of map distances from recombination values. Ann. Eugen. 12: 172-175.
23. LAGERCRANTZ, U., 1998 Comparative mapping between Arabidopsis thaliana and Brassica nigra indicates that Brassica genomes have evolved through extensive genome replication accompanied by chromosome fusions and frequent rearrangements. Genetics 150: 1217-1228.
24. LANDER, E. S., P. GREEN, J. ABRAHAMSON, A. BARLOW, M. J. DALY et al., 1987 MAPMAKER: an interactive computer package for constructing primary genetic linkage maps of experimental and natural populations. Genomics 1: 174-181.
25. LESLEY, M. M., and J. W. LESLEY, 1943 Meiosis in hybrids of the Chilean tomato. J. Hered. 34: 199-205.
26. MCGUIRE, D. C., and C. M. RICK, 1954 Self-incompatibility in species of Lycopersicon Sect. Eriopersicon and hybrids with L. esculentum. Hilgardia 23: 101-123.
27. MENZEL, M. Y., 1962 Pachytene chromosomes of the intergeneric hybrid Lycopersicon esculentum × Solanum lycopersicoides. Am. J. Bot. 49: 605-615.
28. MENZEL, M. Y., 1964 Differential chromosome pairing in allotetraploid Lycopersicon esculentum-Solanum lycopersicoides. Genetics 50: 855-862.
29. MILLER, J. C., and S. D. TANKSLEY, 1990 RFLP analysis of phylogenetic relationships and genetic variation in the genus Lycopersicon. Theor. Appl. Genet. 80: 437-448.
30. NEAL, C. A., and L. D. TOPOLESKI, 1983 Effects of the basal medium on growth of immature tomato embryos in vitro. J. Am. Soc. Hortic. Sci. 108: 434-438.
31. NELSON, C. J., 1997 QGENE: software for marker-based genomic analysis and breeding. Mol. Breed. 3: 229-235.
32. PARAN, I., I. GOLDMAN, S. D. TANKSLEY and D. ZAMIR, 1995 Recombinant inbred lines for genetic mapping in tomato. Theor. Appl. Genet. 90: 542-548.
33. PATERSON, A. H., J. W. DEVERNA, B. LANINI and S. D. TANKSLEY, 1990 Fine mapping of quantitative trait loci using selected overlapping recombinant chromosomes, in an interspecies cross of tomato. Genetics 124: 735-742.
34. PATERSON, A. H., Y. R. LIN, Z. LI, K. F. SCHERTZ, J. F. DOEBLEY et al., 1995 Convergent domestication of cereal crops by independent mutations at corresponding genetic loci. Science 269: 1714-1718.
35. PATERSON, A. H., T. LAN, K. P. REISCHMANN, C. CHANG, Y. LIN et al., 1990 Toward a unified genetic map of higher plants, transcending the monocot-dicot divergence. Nat. Genet. 14: 380-382.
36. PELHAM, J., 1968 Disturbed segregation of genes on chromosome 9: gamete promoter, Gp, a new gene. Rep. Tomato Genet. Coop. 18: 27-29.
37. PEREIRA, M. G., M. LEF, P. BRAMEL-COX, W. WOODMAN, J. DOEBLEY et al., 1994 Construction of an RFLP map in sorghum and comparative mapping in maize. Genome 37: 236-243.
38. PRINCE, J. P., E. POCHARD and S. D. TANKSLEY, 1993 Construction of a molecular linkage map of pepper and a comparison of synteny with tomato. Genome 36: 404-417.
39. RICK, C. M., 1951 Hybrids between Lycopersicon esculentum Mill, and Solanum lycopersicoides Dun. Proc. Natl. Acad. Sci. USA 37: 741-744.
40. RICK, C. M., 1979 Biosystematic studies in Lycopersicon and closely related species of Solanum, pp. 667-678 in The Biology and Taxonomy of the Solanaceae, edited by J. G. HAWKES, R. N. LESTER and A. D. SKELDING. Academic Press, New York.
41. RICK, C. M., 1995 Tomato, Lycopersicon esculentum (Solanaceae), pp. 452-457 in Evolution of Crop Plants, Ed. 2, edited by J. SMARTT and N. W. SIMMONDS. Longman, London.
42. RICK, C. M., and J. F. FOBES, 1975 Allozyme variation in the cultivated tomato and closely related species. Bull. Torrey Bot. Club 102: 376-384.
43. RICK, C. M., J. W. DEVERNA, R. T. CHETELAT and M. A. STEVENS, 1986 Meiosis in sesquidiploid hybrids of Lycopersicon esculentum and Solanum lycopersicoides. Proc. Natl. Acad. Sci. USA 83: 3580-3583.
44. RICK, C. M., R. T. CHETELAT and J. W. DEVERNA, 1988 Recombination in sesquidiploid hybrids of Lycopersicon esculentum × Solanum lycopersicoides and derivatives. Theor. Appl. Genet. 76: 647-655.
45. SAWANT, A. C., 1958 Cytogenetics of interspecific hybrids, Lycopersicon esculentum Mill. × L. hirsutum Humb. and Bonpl. Genetics 43: 502-514.
46. SHERMAN, J. D., and S. M. STACK, 1995 Two-dimensional spreads of synaptonemal complexes from solanaceous plants. VI. High resolution recombination nodule map for tomato (Lycopersicon esculentum). Genetics 141: 683-708.
47. SPOONER, D. M., G. J. ANDERSON and R. K. JANSEN, 1993 Chloroplast DNA evidence for the interrelationships of tomatoes, potatoes, and pepinos (Solanaceae). Am. J. Bot. 80: 676-688.
48. STEPHAN, W., and C. H. LANGLEY, 1998 DNA polymorphism in Lycopersicon and crossing-over per physical length. Genetics 150: 1585-1593.
49. TANKSLEY, S. D., M. W. GANAL, J. P. PRINCE, M. C. DE VICENTE, M. W. BONIERBALE, et al., 1992 High density molecular linkage maps of the tomato and potato genomes. Genetics 132: 1141-1160.
50. VAN WORDRAGEN, M. F., R. L. WEIDE, E. COPPOOLSE, M. KOORNNEEF and P. ZABEL, 1996 Tomato chromosome 6: a high resolution map of the long arm and construction of a composite integrated marker-order map. Theor. Appl. Genet. 92: 1065-1072.
51. WILLIAMS, C. E., and D. A. ST. CLAIR, 1993 Phenetic relationships and levels of variability detected by restriction fragment length polymorphism and random amplified polymorphic DNA analysis of cultivated and wild accessions of Lycopersicon esculentum. Genome 36: 619-630.
52. ZAMIR, D., and Y. TADMOR, 1986 Unequal segregation of nuclear genes in plants. Bot. Gaz. 147: 355-358.