Modeling dynamic light scattering of supercoiled DNA

Macromolecules

Volumn 33, Issue 4, 2000, Pages 1459-1466

  Kienin, Konstantin ^a   Hammermann, Markus ^a   Langowski, Jörg ^a  

^a GERMAN CANCER RESEARCH CENTER DKFZ   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

COMPUTER SIMULATION; CONFORMATIONS; LIGHT SCATTERING; MATHEMATICAL MODELS; MOLECULAR DYNAMICS; MOLECULAR STRUCTURE; MONTE CARLO METHODS; RELAXATION PROCESSES; SODIUM CHLORIDE; SOLUTIONS;

BROWNIAN DYNAMICS; DYNAMIC LIGHT SCATTERING;

DNA;

EID: 0033902554     PISSN: 00249297     EISSN: None     Source Type: Journal    
DOI: 10.1021/ma9914467     Document Type: Article

References (32)

1. Ermak, D. L.; McCammon, J. A. J. Chem. Phys. 1978, 69, 1352-1360.
2. Allison, S. A.; McCammon, J. A. Biopolymers 1984, 23, 167-187.
3. Allison, S. Macromolecules 1986, 19, 118-124.
4. Allison, S.; Austin, R.; Hogan, M. J. Chem. Phys. 1989, 90, 3843-3854.
5. Chirico, G.; Langowski, J. Macromolecules 1992, 25, 769-775.
6. Jian, H.; Vologodskii, A.; Schlick, T. J. Comput. Phys. 1997, 73, 123-132.
7. Podtelezhnikov, A.; Vologodskii, A. Macromolecules 1997, 30, 6668-6673.
8. Allison, S. A.; McCammon, J. A. Biopolymers 1984, 23, 363-375.
9. Allison, S. A.; Sorlie, S. S.; Pecora, R. Macromolecules 1990, 23, 1110-1118.
10. Allison, S. A. Macromolecules 1991, 24, 530-536.
11. Chirico, G.; Langowski, J. Biopolymers 1994, 34, 415-433.
12. Chirico, G.; Langowski, J. Biophys. J. 1996, 71, 955-971.
13. Heath, P. J.; Gebe, J. A.; Allison, S. A.; Schurr, J. M. Macromolecules 1996, 29, 3583-3596.
14. Klenin, K.; Merlitz, H.; Langowski, J. Biophys. J. 1998, 74, 780-788.
15. Jian, H.; Schlick, T.; Vologodskii, A. J. Mol. Biol. 1998, 284, 287-296.
16. Hammermann, M.; Steinmaier, C.; Merlitz, H.; Kapp, U.; Waldeck, W.; Chirico, G.; Langowski, J. Biophys. J. 1997, 73, 2674-2687.
17. Berg, O. G. Biopolymers 1979, 18, 2861-2874.
18. Soda, K. Macromolecules 1984, 17, 2365-2375.
19. Chu, B. Laser Light Scattering, 2nd ed.; Academic Press: Boston, 1991.
20. Tanford, C. Physical Chemistry of Macromolecules; Wiley: New York, 1961.
21. Lewis, R.; Huang, J. H.; Pecora, P. Macromolecules 1985, 18, 944-948.
22. Langowski, J.; Giesen, U.; Lehmann, C. Biophys. Chem. 1986, 25, 191-200.
23. Fishman, D. M.; Patterson, G. D. Biopolymers 1996, 38, 535-552.
24. Vologodskii, A. V.; Levene, S. D.; Klenin K. V.; Frank-Kamenetskii, M. D.; Cozzarelli, N. R. J. Mol. Biol. 1992, 227, 1224-1243.
25. Allen, M. P.; Tildesley, D. J. Computer Simulation of Liquids; Clarendon Press: Oxford, 1987.
26. Hammermann, M.; Brun, N.; Klenin, K. V.; May, R.; Tóth, K.; Langowski, J. Biophys. J. 1998, 75, 3057-3063.
27. Hagerman, P. J.; Zimm, B. H. Biopolymers 1981, 20, 1481-1502.
28. Stigter, D. Biopolymers 1977, 16, 1435-1448.
29. Baumann, C. G.; Smith S. B.; Bloomfield V. A.; Bustamante, C. Proc. Natl. Acad. Sci. U.S.A. 1997, 94, 6185-6190.
30. Langowski, J.; Kapp, U.; Klenin, K.; Vologodskii, A. Biopolymers 1994, 34, 639-646.
31. Yamakawa, H. Modern Theory of Polymer Solutions; Harper and Row: New York, 1971.
32. Garcia de la Torre, J.; Bloomfield, V. A. Q. Rev. Biophys. 1981, 14, 81-139.