Effect of 3' terminal adenylic acid residue on the uridylation of human small RNAs in vitro and in frog oocytes

RNA

Volumn 6, Issue 9, 2000, Pages 1277-1288

  Chen, Yahua ^a   Sinha, Krishna ^a   Perumal, Karthika ^a   Reddy, Ram ^a  

^a BAYLOR COLLEGE OF MEDICINE   (United States)

Author keywords

3' adenylation; 3' uridylation; 7SK RNA; SRP RNA; U6 snRNA

Indexed keywords

ADENOSINE PHOSPHATE; RIBOSOME RNA; RNA; SIGNAL RECOGNITION PARTICLE; SMALL NUCLEAR RNA; URIDINE PHOSPHATE;

ADENYLATION; ARTICLE; EVOLUTION; HUMAN; NONHUMAN; PRIORITY JOURNAL; PROTEIN RNA BINDING; RNA PROCESSING; RNA TRANSCRIPTION; XENOPUS;

ADENOSINE MONOPHOSPHATE; ALU ELEMENTS; ANIMALS; HELA CELLS; HUMANS; OOCYTES; RNA PROCESSING, POST-TRANSCRIPTIONAL; RNA, RIBOSOMAL, 5S; RNA, SMALL NUCLEAR; SIGNAL RECOGNITION PARTICLE; TRANSFECTION; URIDINE; URIDINE MONOPHOSPHATE; XENOPUS;

EID: 0033826978     PISSN: 13558382     EISSN: None     Source Type: Journal    
DOI: 10.1017/S1355838200000285     Document Type: Article

References (54)

1. A doughnut-shaped heteromer of human Sm-like proteins binds to the 3'-end of U6 snRNA, thereby facilitating U4/U6 duplex formation in vitro
2. The mechanism of U insertion/deletion RNA editing in kinetoplastid mitochondria
3. Functions of the exosome in rRNA, snoRNA and snRNA synthesis
4. The yeast exosome and human PM-Scl are related complexes of 3' → 5' exonucleases
5. Poliovirus replicase stimulation by terminal uridylyl transferase
6. Mechanism and evolution of RNA editing in kinetoplastida
7. A possible role for the guide RNA U-tail as a specificity determinant in formation of guide RNA-messenger RNA chimeras in mitochondrial extracts of Crithidia fasciculata
8. Animal mitochondrial DNA: An extreme example of genetic economy
9. Identification and characterization of a nuclease specific for the 3' end of the U6 small nuclear RNA
10. Accurate 3' end processing and adenylation of human signal recognition particle RNA and alu RNA in vitro
11. Transcription and replication of animal mitochondrial DNAs
12. Upstream regulatory elements are necessary and sufficient for transcription of a U6 RNA gene by RNA polymerase III
13. Biochemical research on oogenesis. 7. Synthesis and maturation of 5S RNA in the small oocytes of Xenopus laevis
14. Ribonucleases, tRNA nucleotidyltransferase, and the 3' processing of tRNA
15. Accurate transcription initiation by RNA polymerase II in a soluble extract from isolated mammalian nuclei
16. Specific labeling of 3' termini of RNA with T4 RNA ligase
17. An essential signaling role for the m3G cap in the transport of U1 snRNP to the nucleus
18. 3'-Terminal RNA structures and poly(U) tracts inhibit initiation by a 3' → 5' exonuclease in vitro
19. Formation of 2',3'-Cyclic phosphates at the 3' end of human U6 small nuclear RNA in vitro. Identification of 2',3'-cyclic phosphates at the 3' ends of human signal recognition particle and mitochondrial RNA processing RNAs
20. Formation of the 3' end of U1 snRNA is directed by a conserved sequence located downstream of the coding region
21. Uridylation of U6 RNA in a nuclear extract in Ehrlich ascites tumor cells
22. No end yet to messenger RNA 3' processing!
23. Accurate and efficient 3' processing of U2 small nuclear RNA precursor in a fractionated cytoplasmic extract
24. U6 small nuclear RNA is transcribed by RNA polymerase III
25. Mapping contacts between gRNA and mRNA in trypanosome RNA editing
26. Polyadenylation of stable RNA precursors in vivo
27. Cyclic 2',3'-phosphates and nontemplated nucleotides at the 3' end of spliceosomal U6 small nuclear RNA's
28. A complex protein assembly catalyzes polyadenylation of mRNA precursors
29. Characterization of Sm-like proteins in yeast and their association with U6 snRNA
30. The exosome: A conserved eukaryotic RNA processing complex containing multiple 3' → 5' exoribonucleases
31. Determination of RNA-protein and RNA-ribonucleoprotein interactions by nuclease probing
32. Characterization of two classes of ribonucleoprotein complexes possibly involved in RNA editing from Leishmania tarentolae mitochondria
33. Evolutionary conservation of posttranscriptional 3' end adenylation of small RNAs: S. cerevisiae signal recognition particle RNA and U2 small nuclear RNA are posttranscriptionally adenylated
34. Poly(U)-binding protein inhibits Drosophila pre-5 S RNA 3'-exonuclease digestion
35. The capped U6 small nuclear RNA is transcribed by RNA polymerase III
36. Association of the lupus antigen La with a subset of U6 snRNA molecules
37. DNA sequencing with chain-terminating inhibitors
38. Methylphosphate cap structure increases the stability of 7SK, B2 and U6 small RNAs in Xenopus oocytes
39. 32P labeling in the sequence analysis of nonradioactive tRNAs
40. Gamma-monomethyl phosphate: A cap structure in spliceosomal U6 small nuclear RNA
41. Posttranscriptional adenylation of signal recognition particle RNA is carried out by an enzyme different from mRNA Poly(A) polymerase
42. Adenylation of small RNAs in human cells. Development of a cell-free system for accurate adenylation on the 3'-end of human signal recognition particle RNA
43. Trypanosome RNA editing: Resolved
44. RNA editing in kinetoplastid protozoa
45. 3'-end-dependent formation of U6 small nuclear ribonucleoprotein particles in Xenopus laevis oocyte nuclei
46. Nuclear transport of RNAs in microinjected Xenopus oocytes
47. In vivo expression of a variant human U6 RNA from a unique, internal promoter
48. A highly specific terminal uridylyl transferase modifies the 3'-end of U6 small nuclear RNA
49. The exosome: A proteasome for RNA?
50. Faithful transcription of eukaryotic genes by RNA polymerase III in systems reconstituted with purified DNA templates
51. Formation of the 3' end of sea urchin U1 small nuclear RNA occurs independently of the conserved 3' box and on transcripts initiated from a histone promoter
52. Nuclear processing of the 3'-terminal nucleotides of pre-U1 RNA in Xenopus laevis oocytes
53. Terminal uridylyl transferase of Vigna unguiculata: Purification and characterization of an enzyme catalyzing the addition of a single UMP residue to the 3'-end of an RNA primer
54. Newly synthesized small nuclear RNAs appear transiently in the cytoplasm