Three steps of homology assessment

Cladistics

Volumn 12, Issue 3, 1996, Pages 265-272

  Brower, Andrew V Z ^a   Schawaroch, Valerie ^a,b  

^a DIVISION OF INVERTEBRATE ZOOLOGY   (United States)

^b CITY COLLEGE OF NEW YORK   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

PINNA;

EID: 0000775209     PISSN: 07483007     EISSN: None     Source Type: Journal    
DOI: 10.1006/clad.1996.0020     Document Type: Article

References (33)

1. BOCK, W. J. 1973. Philosophical foundations of classical evolutionary classification. Syst. Zool. 22: 375-392.
2. BRADY, R. H. 1985. On the independence of systematics. Cladistics 1: 113-126.
3. DE BEER, G. R. 1971. Homology: an unsolved problem. Oxford Biol. Readers 11: 3-16.
4. DE PINNA, M. C. C. 1991. Concepts and tests of homology in the cladistic paradigm. Cladistics 7: 367-394.
5. DOOLITTLE, R. F. 1981. Similar amino acid sequences: chance or common ancestry? Science 214: 149-159.
6. ELDREDGE, N. AND J. CRACRAFT. 1980. Phylogenetic Patterns and the Evolutionary Process. Columbia University Press, New York.
7. FARRIS, J. S. 1982. Outgroups and parsimony. Syst. Zool. 31: 328-334.
8. FARRIS, J. S. 1983. The logical basis of phylogenetic analysis. In: N. I. Platnick and V. A. Funk (eds). Advances in Cladistics, vol. 2. Columbia University Press, New York, pp. 7-36.
9. GAFFNEY, E. S. 1979. An introduction to the logic of phylogeny reconstruction. In: J. Cracraft and N. Eldredge (eds). Phylogenetic Analysis and Paleontology. New York, Columbia University Press. pp. 79-111.
10. HENNIG, W. 1966. Phylogenetic Systematics. University of Illinois Press, Urbana, IL.
11. HILLIS, D. M. 1987. Molecular versus morphological approaches to systematics. Annu. Rev. Ecol. Syst. 18: 23-42.
12. INGLIS, W. G. 1966. The observational basis of homology. Syst. Zool. 15: 219-228.
13. JARDINE, N. 1969. The observational and theoretical components of homology: a study on the morphology of the dermal skull-roofs of rhidpidistian fishes. Biol. J. Linn. Soc. 1: 327-361.
14. KLUGE, A. G. 1994. Moving targets and shell games. Cladistics 10: 403-413.
15. LIPSCOMB, D. L. 1992. Parsimony, homology and the analysis of multistate characters. Cladistics 8: 45-65.
16. MAYR, E. 1969. Principles of Systematic Zoology. McGraw-Hill, New York.
17. MINDELL, D. P. 1991. Aligning DNA sequences: homology and phylogenetic weighting. In: M. M. Miyamoto and J. Cracraft (eds). Phylogenetic Analysis of DNA Sequences. Oxford University Press, Oxford, pp. 73-89.
18. NELSON, G. AND N. PLATNICK. 1981. Systematics and Biogeography. Columbia University Press, New York.
19. NIXON, K. C. AND J. M. CARPENTER. 1993. On outgroups. Cladistics 9: 413-426.
20. PATTERSON, C. 1982. Morphological characters and homology. In: K A. Joysey and A. E. Friday (eds). Problems of Phylogenetic Reconstruction. Academic Press, London and New York, pp. 21-74.
21. PATTERSON, C. 1988. Homology in classical and molecular biology. Mol. Biol. Evol. 5: 603-625.
22. PLATNICK, N. I. 1977. Cladograms, phylogenetic trees, and hypothesis testing. Syst. Zool 26: 438-442.
23. PLATNICK, N. I. 1979. Philosophy and the transformation of cladistics. Syst. Zool. 28: 537-546.
24. POGUE, M. G. AND M. F. MICKEVICH. 1990. Character definitions and character state delineation: the bête noire of phylogenetic inference. Cladistics 6: 319-361.
25. POPPER, K. R. 1959. The Logic of Scientific Discovery. Basic Books. New York.
26. REMANE, A. 1952. Die Grundlagen des naturlichen Systems, der vergleichenden Anatomie und der Phylogenetik. Geest und Portig, Leipzig.
27. RIEPPEL, O. C. 1988. Fundamentals of Comparative Biology. Birkhäuser Verlag, Basel.
28. WESTWOOD, J. O. 1840. Observations upon the relationships existing amongst natural objects, resulting from more or less perfect resemblance, usually termed affinity and analogy. Mag. Nat. Hist. 6 (N.S.): 141-144.
29. WHEELER, Q. D. 1990. Ontogeny and character phylogeny. Cladistics 6: 225-268.
30. WHEELER, W. C. 1994. Sources of ambiguity in nucleic acid sequence alignment. In: B. Schierwater, B. Streit, G. P. Wagner, and R. DeSalle (eds). Molecular Ecology and Evolution: Approaches and Applications. Birkhäuser Verlag, Basel, pp. 323-354.
31. WHEELER, W. C. 1995. Sequence alignment, parameter sensitivity, and the phylogenetic analysis of molecular data. Syst. Biol. 44: 321-331.
32. WILEY, E. O. 1975. Karl R. Popper, systematics, and classification: a reply to Walter Bock and other evolutionary systematists. Syst. Zool. 24: 233-243.
33. WOODGER, J. H. 1945. On biological transformations. In: W. E. Le Gros Clark and P. B. Medawar (eds). Essays on Growth and Form Presented to D'arcy Thompson. Oxford University Press, Oxford, pp. 95-120.