The role of the interdomain B linker in the activation of the XyIR protein of Pseudomonas putida

Molecular Microbiology

Volumn 38, Issue 2, 2000, Pages 401-410

  Garmendia, J ^a   De Lorenzo, V ^a  

^a CENTRO NACIONAL DE BIOTECNOLOGÍA   (Spain)

Author keywords

[No Author keywords available]

Indexed keywords

ALANINE; AROMATIC COMPOUND; ASPARTIC ACID; BINDING PROTEIN; PROLINE; TOLUENE; TOLUENE DERIVATIVE; UNCLASSIFIED DRUG; VALINE; XYLENE; XYLR PROTEIN;

ARTICLE; CONTROLLED STUDY; ENHANCER REGION; GENE ACTIVATION; NONHUMAN; PHENOTYPE; PLASMID; PRIORITY JOURNAL; PROMOTER REGION; PROTEIN EXPRESSION; PROTEIN STRUCTURE; PSEUDOMONAS PUTIDA; STRUCTURE ACTIVITY RELATION;

ALLELES; BACTERIAL PROTEINS; CULTURE MEDIA; DNA-BINDING PROTEINS; GENE EXPRESSION REGULATION, BACTERIAL; GENES, BACTERIAL; MODELS, BIOLOGICAL; MUTAGENESIS; NAPHTHALENES; PHENOTYPE; PSEUDOMONAS PUTIDA; TOLUENE; TRANSCRIPTION FACTORS;

PROKARYOTA; PSEUDOMONAS; PSEUDOMONAS PUTIDA;

EID: 0033753298     PISSN: 0950382X     EISSN: None     Source Type: Journal    
DOI: 10.1046/j.1365-2958.2000.02139.x     Document Type: Article

References (33)

1. Regulator and enzyme specificities of the TOL plasmid-encoded upper pathway for degradation of aromatic and expansion of the substrate range of the pathway
2. Identification of linker regions and domain borders of the transcription activator protein NtrC from Escherichia coli by limited proteolysis, in-gel digestion and mass spectrometry
3. 54 in exponential silencing of the Pseudomonas putida TOL plasmid Pu promoter
4. Prediction of the secondary structure of proteins from their amino acid sequence
5. The xylABC promoter from the Pseudomonas putida TOL plasmid is activated by nitrogen regulatory genes in Escherichia coli
6. Activation of the transcriptional regulator XylR of Pseudornonas putida by release of repression between functional domains
7. Transposon vectors containing non-antibiotic resistance selection markers for cloning and stable chromosomal insertion of foreign genes in gram-negative bacteria
8. Determination of the transcription initiation site and identification of the protein product of the regulatory gene xylR for xyl operons on the TOL plasmid
9. Nucleotide sequence of the regulatory gene xylR of the TOL plasmid from Pseudomonas putida
10. A wide-host-range suicide vector for improving reverse genetics in Gram-negative bacteria: Inactivation of the blaA gene of Yersinia enterocolitica
11. Analysis and construction of stable phenotypes in Gram-negative bacteria with Tn5- and Tn10-derived minitransposons
12. Mini-Tn5 transposon derivatives for insertion mutagenesis, promoter probing, and chromosome insertion of cloned DNA in Gram-negative eubacteria
13. Engineering alkyl- and haloaromatic-responsive gene expression with mini-transposons containing regulated promoters of biodegradative pathways of Pseudomonas
14. Prediction and analysis of coiled-coil structures
15. 38 depending on the growth phase
16. Transcriptional regulation in bacteriophage Φ29: Expression of the viral promoters throughout the infection cycle
17. 54 bacterial enhancer-binding protein family: Mechanism of action and phylogenetic relationship of their functional domains
18. 54-dependant activator DmpR
19. Prokaryotic enhancer-binding proteins reflect eukaryote-like modularity: The puzzle of nitrogen regulatory protein C
20. 54-dependent regulator DmpR
21. The amino-terminal domain of the prokaryotic enhancer-binding protein XylR is a specific intramolecular repressor
22. ATP binding to the σ-54 dependent activator XyIR triggers a protein multimerizaton cycle catayzed by UAS DNA
23. Identification of the repressor subdomain within the signal reception module of the prokaryotic enhancer-binding protein XylR of Pseudomonas putida
24. Signal-regulator interactions. Genetic analysis of the effector binding site of XylS, the benzoate-activated positive regulator of Pseudomonas TOL plasmid metacleavage pathway operon
25. Transcriptional control of the Pseudomonas TOL plasmid catabolic operons is achieved through an interplay of host factors and plasmid encoded regulators
26. Modulation of the function of the signal receptor domain of XylR, a member of a family of prokaryotic enhancer-like positive regulators
27. Signal sensing by sigma 54-dependent regulators: Derepression as a control mechanism
28. The Q-linker: A class of interdomain sequences found in bacterial multi-domain regulatory proteins
29. Carbon-source-dependent expression of the PalkB promoter from the Pseudomonas oleovorans alkane degradation pathway