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Volumn 28, Issue 1, 1998, Pages 131-141

Aromatic ligand binding and intramolecular signalling of the phenol-responsive σ54-dependent regulator DmpR

Author keywords

[No Author keywords available]

Indexed keywords

ADENOSINE TRIPHOSPHATASE; PHENOL; REGULATOR PROTEIN;

EID: 0031945812     PISSN: 0950382X     EISSN: None     Source Type: Journal    
DOI: 10.1046/j.1365-2958.1998.00780.x     Document Type: Article
Times cited : (46)

References (46)
  • 1
    • 0024357889 scopus 로고
    • Regulator and enzyme specificities of the TOL plasmid-encoded upper pathway for the degradation of aromatic hydrocarbons and expansion of the substrate range of the pathway
    • Abril, M.A., Michan, C., Timmis, K.N., and Ramos, J.L. (1989) Regulator and enzyme specificities of the TOL plasmid-encoded upper pathway for the degradation of aromatic hydrocarbons and expansion of the substrate range of the pathway. J Bacteriol 171: 6782-6790.
    • (1989) J Bacteriol , vol.171 , pp. 6782-6790
    • Abril, M.A.1    Michan, C.2    Timmis, K.N.3    Ramos, J.L.4
  • 2
    • 0026581288 scopus 로고
    • The prokaryotic enhancer binding protein NtrC has an ATPase activity which is phosphorylation and DNA dependent
    • Austin, S., and Dixon, R. (1992) The prokaryotic enhancer binding protein NtrC has an ATPase activity which is phosphorylation and DNA dependent. EMBO J 11: 2219-2228.
    • (1992) EMBO J , vol.11 , pp. 2219-2228
    • Austin, S.1    Dixon, R.2
  • 3
    • 0019841247 scopus 로고
    • Role of the nifA gene product in the regulation of nil expression in Klebsiella pneumoniae
    • Buchanan-Wollaston, V., Cannon, M.C., Beynon, J.L., and Cannon, F.C. (1981) Role of the nifA gene product in the regulation of nil expression in Klebsiella pneumoniae. Nature 294: 776-778.
    • (1981) Nature , vol.294 , pp. 776-778
    • Buchanan-Wollaston, V.1    Cannon, M.C.2    Beynon, J.L.3    Cannon, F.C.4
  • 4
    • 0029858051 scopus 로고    scopus 로고
    • Cascade regulation of the toluene-3-monooxygenase operon (tbuA1UBVA2C) of Burkholderia pickettii PKO1 : Role of the tbuA1 promoter (Ptbu1) in the expression of its cognate activator, TbuT
    • Byrne, A.M., and Olsen, R.H. (1996) Cascade regulation of the toluene-3-monooxygenase operon (tbuA1UBVA2C) of Burkholderia pickettii PKO1 : role of the tbuA1 promoter (Ptbu1) in the expression of its cognate activator, TbuT. J Bacteriol 178: 6327-6337.
    • (1996) J Bacteriol , vol.178 , pp. 6327-6337
    • Byrne, A.M.1    Olsen, R.H.2
  • 5
    • 0026323326 scopus 로고
    • The C-terminal region of the Vibrio fischen LuxR protein contains an inducer-independent lux gene activating domain
    • Choi, S.H., and Greenberg, E.P. (1991) The C-terminal region of the Vibrio fischen LuxR protein contains an inducer-independent lux gene activating domain. Proc Natl Acad Sci USA 88: 11115-11119.
    • (1991) Proc Natl Acad Sci USA , vol.88 , pp. 11115-11119
    • Choi, S.H.1    Greenberg, E.P.2
  • 6
    • 0028244041 scopus 로고
    • Genetic evidence for activation of the positive transcriptional regulator XyIR, a member of the NtrC family of regulators, by effector binding
    • Delgado, A., and Ramos, J.L. (1994) Genetic evidence for activation of the positive transcriptional regulator XyIR, a member of the NtrC family of regulators, by effector binding. J Biol Chem 269: 8059-8062.
    • (1994) J Biol Chem , vol.269 , pp. 8059-8062
    • Delgado, A.1    Ramos, J.L.2
  • 7
    • 0028912178 scopus 로고
    • Single amino acid changes in the signal receptor domain of XyIR result in mutants that stimulate transcription in the absence of effectors
    • Delgado, A., Salto, R., Marqués, S., and Ramos, J.L. (1995) Single amino acid changes in the signal receptor domain of XyIR result in mutants that stimulate transcription in the absence of effectors. J Biol Chem 270: 5144-5150.
    • (1995) J Biol Chem , vol.270 , pp. 5144-5150
    • Delgado, A.1    Salto, R.2    Marqués, S.3    Ramos, J.L.4
  • 8
    • 0027132539 scopus 로고
    • Amino-terminal amino acids modulate σ-factor DNA binding activity
    • Dombroski, A.J., Walter, W.A., and Gross, C.A. (1993) Amino-terminal amino acids modulate σ-factor DNA binding activity. Genes Dev 7: 2446-2455.
    • (1993) Genes Dev , vol.7 , pp. 2446-2455
    • Dombroski, A.J.1    Walter, W.A.2    Gross, C.A.3
  • 9
    • 0029063837 scopus 로고
    • Activation of the transcriptional regulator XyIR of Pseudomonas putida by release of repression between functional domains
    • Fernández, S., de Lorenzo, V., and Perez-Martin, J. (1995) Activation of the transcriptional regulator XyIR of Pseudomonas putida by release of repression between functional domains. Mol Microbiol 16: 205-213.
    • (1995) Mol Microbiol , vol.16 , pp. 205-213
    • Fernández, S.1    De Lorenzo, V.2    Perez-Martin, J.3
  • 10
    • 0029164694 scopus 로고
    • A common switch in activation of the response regulator NtrC and PhoB: Phosphorylation induces dimerization of the receiver module
    • Fiedler, U., and Weiss, V. (1995) A common switch in activation of the response regulator NtrC and PhoB: phosphorylation induces dimerization of the receiver module. EMBO J 14: 3696-3705.
    • (1995) EMBO J , vol.14 , pp. 3696-3705
    • Fiedler, U.1    Weiss, V.2
  • 11
    • 0005536404 scopus 로고
    • Molecular and functional analysis of the TOL plasmid pWWO from Pseudomonas putida and cloning of genes for the entire regulated aromatic ring meta-cleavage pathway
    • Franklin, F.C.H., Bagdasarian, M.M., Bagdasarian, M., and Timmis, K.N. (1981) Molecular and functional analysis of the TOL plasmid pWWO from Pseudomonas putida and cloning of genes for the entire regulated aromatic ring meta-cleavage pathway. Proc Natl Acad Sci USA 18: 7458-7462.
    • (1981) Proc Natl Acad Sci USA , vol.18 , pp. 7458-7462
    • Franklin, F.C.H.1    Bagdasarian, M.M.2    Bagdasarian, M.3    Timmis, K.N.4
  • 12
    • 0013616157 scopus 로고
    • Molecular cloning of the RP4 DNA primase region in a multirange tacP expression vector
    • Fürste, J.P., Pansegrau, W., Frank, R., Blöcker, H., Scholz, P., Bagdasarian, M., et al. (1987) Molecular cloning of the RP4 DNA primase region in a multirange tacP expression vector. Gene 55: 19-28.
    • (1987) Gene , vol.55 , pp. 19-28
    • Fürste, J.P.1    Pansegrau, W.2    Frank, R.3    Blöcker, H.4    Scholz, P.5    Bagdasarian, M.6
  • 13
    • 0030967333 scopus 로고    scopus 로고
    • Role of the transcriptional activator RocR in the arginine-degradation pathway of Bacillus subtilis
    • Gardan, R., Rapoport, G., and Débarbouillé, M. (1997) Role of the transcriptional activator RocR in the arginine-degradation pathway of Bacillus subtilis. Mol Microbiol 24: 825-837.
    • (1997) Mol Microbiol , vol.24 , pp. 825-837
    • Gardan, R.1    Rapoport, G.2    Débarbouillé, M.3
  • 14
    • 0028286432 scopus 로고
    • 54-dependent transcriptional activator, may be negatively controlled by a subdomain in the C-terminal end of its two-component receiver module
    • 54-dependent transcriptional activator, may be negatively controlled by a subdomain in the C-terminal end of its two-component receiver module. Mol Microbiol 13: 51-66.
    • (1994) Mol Microbiol , vol.13 , pp. 51-66
    • Gu, B.1    Lee, J.H.2    Hoover, T.R.3    Scholl, D.4    Nixon, T.5
  • 15
    • 0023714467 scopus 로고
    • A short polypeptide marker sequence useful for recombinant protein identification and purification
    • Hopp, T.P., Prickett, K.S., Price, V.L., Libby, R.T., March, C.J., Cerretti, D.P., et al. (1988) A short polypeptide marker sequence useful for recombinant protein identification and purification. Biotechnology. 6: 1204-1210.
    • (1988) Biotechnology , vol.6 , pp. 1204-1210
    • Hopp, T.P.1    Prickett, K.S.2    Price, V.L.3    Libby, R.T.4    March, C.J.5    Cerretti, D.P.6
  • 16
    • 0029044907 scopus 로고
    • 54-dependent transcriptional activator FHLA from Escherichia coli
    • 54-dependent transcriptional activator FHLA from Escherichia coli. J Bacteriol 177: 2798-2803.
    • (1995) J Bacteriol , vol.177 , pp. 2798-2803
    • Hopper, S.1    Böck, A.2
  • 17
    • 0027476641 scopus 로고
    • Integration of multiple developmental signals in Bacillus subtilis through the Spo0A transcription factor
    • Ireton, K., Rudner, D.Z., Siranosia, K.J., and Grossman, A.D. (1993) Integration of multiple developmental signals in Bacillus subtilis through the Spo0A transcription factor. Genes Dev 7: 283-294.
    • (1993) Genes Dev , vol.7 , pp. 283-294
    • Ireton, K.1    Rudner, D.Z.2    Siranosia, K.J.3    Grossman, A.D.4
  • 18
    • 0025775119 scopus 로고
    • Modular structure of FixJ: Homology of the transcriptional activator domain with the -35 binding domain of sigma factors
    • Kahn, D., and Ditta, G. (1991) Modular structure of FixJ: homology of the transcriptional activator domain with the -35 binding domain of sigma factors. Mol Microbiol 5: 987-997.
    • (1991) Mol Microbiol , vol.5 , pp. 987-997
    • Kahn, D.1    Ditta, G.2
  • 19
    • 0031038366 scopus 로고    scopus 로고
    • Characterization of fh/A mutations resulting in ligand-independent transcriptional activation and ATP hydrolysis
    • Korsa, L, and Böck, A. (1997) Characterization of fh/A mutations resulting in ligand-independent transcriptional activation and ATP hydrolysis. J Bacteriol 179: 41-45.
    • (1997) J Bacteriol , vol.179 , pp. 41-45
    • Korsa, L.1    Böck, A.2
  • 20
    • 0025938894 scopus 로고
    • Prokaryotic transcriptional enhancers and enhancer-binding proteins
    • Kustu, S., North, A.K., and Weiss, D.S. (1991) Prokaryotic transcriptional enhancers and enhancer-binding proteins. Trends Biochem Sci 16: 397-402.
    • (1991) Trends Biochem Sci , vol.16 , pp. 397-402
    • Kustu, S.1    North, A.K.2    Weiss, D.S.3
  • 21
    • 0025707308 scopus 로고
    • Comparison of promoter activities in Escherichia coli and Pseudomonas aeruginosa: Use of a new broadhost-range promoter probe vector
    • Lodge, J.L., Williams, R., Bell, A., Chan, B., and Busby, S. (1990) Comparison of promoter activities in Escherichia coli and Pseudomonas aeruginosa: use of a new broadhost-range promoter probe vector. FEMS Lett 67: 221-226.
    • (1990) FEMS Lett , vol.67 , pp. 221-226
    • Lodge, J.L.1    Williams, R.2    Bell, A.3    Chan, B.4    Busby, S.5
  • 22
    • 0025357958 scopus 로고
    • Activation of ara operons by a truncated AraC protein does not require inducer
    • Menon, K.P., and Lee, N.I. (1990) Activation of ara operons by a truncated AraC protein does not require inducer. Proc Natl Acad Sci USA. 87: 3708-3712.
    • (1990) Proc Natl Acad Sci USA , vol.87 , pp. 3708-3712
    • Menon, K.P.1    Lee, N.I.2
  • 23
    • 0029148094 scopus 로고
    • Mechanism of activation of a response regulator: Interaction of NtrC dinners induces ATPase activity
    • Mettke, I., Fiedler, U., and Weiss, V. (1995) Mechanism of activation of a response regulator: interaction of NtrC dinners induces ATPase activity. J Bacteriol 177: 5056-5061.
    • (1995) J Bacteriol , vol.177 , pp. 5056-5061
    • Mettke, I.1    Fiedler, U.2    Weiss, V.3
  • 24
    • 0027340543 scopus 로고
    • 54 bacterial enhancer-binding protein family: Mechanism of action and phylogenetic relationship of their functional domains
    • 54 bacterial enhancer-binding protein family: mechanism of action and phylogenetic relationship of their functional domains. J Bacteriol 175: 6067-6074.
    • (1993) J Bacteriol , vol.175 , pp. 6067-6074
    • Morett, E.1    Segovia, L.2
  • 25
    • 0028944411 scopus 로고
    • Aromatic effector activation of the NtrC-like transcriptional regulator PhhR limits the catabolic potential of the (methyl)phenol degradative pathway it controls
    • Ng, L.C., Poh, C.L., and Shingler, V. (1995) Aromatic effector activation of the NtrC-like transcriptional regulator PhhR limits the catabolic potential of the (methyl)phenol degradative pathway it controls. J Bacteriol 177: 1485-1490.
    • (1995) J Bacteriol , vol.177 , pp. 1485-1490
    • Ng, L.C.1    Poh, C.L.2    Shingler, V.3
  • 26
    • 0038566311 scopus 로고    scopus 로고
    • Genetic evidence for interdomain regulation of the phenol-responsive independent activator DmpR
    • Ng, L.C., O'Neill, E., and Shingler, V. (1996) Genetic evidence for interdomain regulation of the phenol-responsive independent activator DmpR. J Biol Chem 271: 17281-17286.
    • (1996) J Biol Chem , vol.271 , pp. 17281-17286
    • Ng, L.C.1    O'Neill, E.2    Shingler, V.3
  • 27
    • 0027938931 scopus 로고
    • An aromatic effector specificity mutant of the transcriptional regulator DmpR overcomes the growth constraints of Pseudomonas sp. strain CF600 on para-substituted methylphenols
    • Pavel, H., Forsman, M., and Shingler, V. (1994) An aromatic effector specificity mutant of the transcriptional regulator DmpR overcomes the growth constraints of Pseudomonas sp. strain CF600 on para-substituted methylphenols. J Bacteriol 176: 7550-7557.
    • (1994) J Bacteriol , vol.176 , pp. 7550-7557
    • Pavel, H.1    Forsman, M.2    Shingler, V.3
  • 28
    • 0029073435 scopus 로고
    • The amino-terminal domain of the prokaryotic enhancer-binding protein XyIR is a specific intramolecular repressor
    • Perez-Martin, J., and de Lorenzo, V. (1995a) The amino-terminal domain of the prokaryotic enhancer-binding protein XyIR is a specific intramolecular repressor. Proc Natl Acad Sci USA 92: 9392-9396.
    • (1995) Proc Natl Acad Sci USA , vol.92 , pp. 9392-9396
    • Perez-Martin, J.1    De Lorenzo, V.2
  • 29
    • 0029870669 scopus 로고
    • Identification of the repressor subdomain within the signal reception module of the prokaryotic enhancer-binding protein XyIR of Pseudomonas putida
    • Perez-Martin, J., and de Lorenzo, V. (1995b) Identification of the repressor subdomain within the signal reception module of the prokaryotic enhancer-binding protein XyIR of Pseudomonas putida. J Biol Chem 271: 7899-7902.
    • (1995) J Biol Chem , vol.271 , pp. 7899-7902
    • Perez-Martin, J.1    De Lorenzo, V.2
  • 30
    • 0030602821 scopus 로고    scopus 로고
    • 54-dependent activator XyIR triggers a protein multimerization cycle catalysed by UAS DNA
    • 54-dependent activator XyIR triggers a protein multimerization cycle catalysed by UAS DNA. Cell 86: 331-339.
    • (1996) Cell , vol.86 , pp. 331-339
    • Perez-Martin, J.1    De Lorenzo, V.2
  • 31
    • 0029919623 scopus 로고    scopus 로고
    • 54-dependent transcriptional activator of Pseudomonas putida
    • 54-dependent transcriptional activator of Pseudomonas putida. J Mol Biol 258: 575-587.
    • (1996) J Mol Biol , vol.258 , pp. 575-587
    • Perez-Martin, J.1    De Lorenzo, V.2
  • 32
    • 0027359777 scopus 로고
    • Oligomerization of NTRC at the g/nA enhancer is required for transcriptional activation
    • Porter, S.C., North, A.K., Wedel, A.B., and Kustu, S. (1993) Oligomerization of NTRC at the g/nA enhancer is required for transcriptional activation. Genes Dev 7: 2258-2273.
    • (1993) Genes Dev , vol.7 , pp. 2258-2273
    • Porter, S.C.1    North, A.K.2    Wedel, A.B.3    Kustu, S.4
  • 33
    • 0002830404 scopus 로고
    • Mechanism of transcriptional activation by NtrC (nitrogen regulatory protein C): Requirement for Oligomerization and phosphorylation
    • Silhavy, T., and Hoch, J. (eds). Washington, DC: American Society for Microbiology Press
    • Porter, S.C., North, A.K., and Kustu, S. (1995) Mechanism of transcriptional activation by NtrC (nitrogen regulatory protein C): requirement for Oligomerization and phosphorylation. In Two-Component Signal Transduction. Silhavy, T., and Hoch, J. (eds). Washington, DC: American Society for Microbiology Press, pp. 147-158.
    • (1995) Two-Component Signal Transduction , pp. 147-158
    • Porter, S.C.1    North, A.K.2    Kustu, S.3
  • 34
    • 0031022512 scopus 로고    scopus 로고
    • On the role of DmpK, an auxiliary protein associated with multicomponent phenol hydroxylase from Pseudomonas sp. strain CF600
    • Powlowski, J., Sealy, J., Shingler, V., and Cadieux, E. (1997) On the role of DmpK, an auxiliary protein associated with multicomponent phenol hydroxylase from Pseudomonas sp. strain CF600. J Biol Chem 272: 945-951.
    • (1997) J Biol Chem , vol.272 , pp. 945-951
    • Powlowski, J.1    Sealy, J.2    Shingler, V.3    Cadieux, E.4
  • 35
    • 0023464708 scopus 로고
    • Vectors for selective expression of cloned DNAs by T7 RNA polymerase
    • Rosenberg, A.H., Lade, B.N., Chui, D.-S., Lin, S.-W., Dunn, J.J., and Studier, F.W. (1987) Vectors for selective expression of cloned DNAs by T7 RNA polymerase. Gene 56: 125-135.
    • (1987) Gene , vol.56 , pp. 125-135
    • Rosenberg, A.H.1    Lade, B.N.2    Chui, D.-S.3    Lin, S.-W.4    Dunn, J.J.5    Studier, F.W.6
  • 37
    • 0031039255 scopus 로고    scopus 로고
    • Expression, inducer spectrum, domain structure, and function of MopR, the regulator of phenol degradation in Acinetobacter calcoaceticus NCIB8250
    • Schirmer, F., Ehrt, S., and Hillen, W. (1997) Expression, inducer spectrum, domain structure, and function of MopR, the regulator of phenol degradation in Acinetobacter calcoaceticus NCIB8250. J Bacteriol 179: 1329-1336.
    • (1997) J Bacteriol , vol.179 , pp. 1329-1336
    • Schirmer, F.1    Ehrt, S.2    Hillen, W.3
  • 38
    • 0029670970 scopus 로고    scopus 로고
    • 54-dependent regulators: Derepression as a control mechanism
    • 54-dependent regulators: derepression as a control mechanism. Mol Microbiol 19:409-416.
    • (1996) Mol Microbiol , vol.19 , pp. 409-416
    • Shingler, V.1
  • 39
    • 0028325759 scopus 로고
    • Sensing of aromatic compounds by the DmpR transcriptional activator of phenolcatabolizing Pseudomonas sp. strain CF600
    • Shingler, V., and Moore, T. (1994) Sensing of aromatic compounds by the DmpR transcriptional activator of phenolcatabolizing Pseudomonas sp. strain CF600. J Bacteriol 176: 1555-1560.
    • (1994) J Bacteriol , vol.176 , pp. 1555-1560
    • Shingler, V.1    Moore, T.2
  • 40
    • 0029132191 scopus 로고
    • Direct regulation of the ATPase activity of the transcriptional activator DmpR by aromatic compounds
    • Shingler, V., and Pavel, H. (1995) Direct regulation of the ATPase activity of the transcriptional activator DmpR by aromatic compounds. Mol Microbiol 17: 505-513.
    • (1995) Mol Microbiol , vol.17 , pp. 505-513
    • Shingler, V.1    Pavel, H.2
  • 41
    • 0026567783 scopus 로고
    • Nucleotide sequence and functional analysis of the complete phenol/3, 4-dimethylphenol catabolic pathway of Pseudomonas sp. strain CF600
    • Shingler, V., Powlowski, J., and Marklund, U. (1992) Nucleotide sequence and functional analysis of the complete phenol/3, 4-dimethylphenol catabolic pathway of Pseudomonas sp. strain CF600. J Bacteriol 174: 711-724.
    • (1992) J Bacteriol , vol.174 , pp. 711-724
    • Shingler, V.1    Powlowski, J.2    Marklund, U.3
  • 42
    • 0027400541 scopus 로고
    • Cloning and nucleotide sequence of the positive regulator, DmpR, of the phenol catabolic pathway of pVI150: A member of the NtrC family of transcriptional activators
    • Shingler, V., Bartilson, M., and Moore, T. (1993) Cloning and nucleotide sequence of the positive regulator, DmpR, of the phenol catabolic pathway of pVI150: a member of the NtrC family of transcriptional activators. J Bacteriol 175: 1596-1604.
    • (1993) J Bacteriol , vol.175 , pp. 1596-1604
    • Shingler, V.1    Bartilson, M.2    Moore, T.3
  • 43
    • 0001493114 scopus 로고    scopus 로고
    • 54-dependent Po promoter controlling the (methyl)phenol dmp-operon of pVI150
    • 54-dependent Po promoter controlling the (methyl)phenol dmp-operon of pVI150. J Bacteriol 178: 3727-3735.
    • (1996) J Bacteriol , vol.178 , pp. 3727-3735
    • Sze, C.C.1    Moore, T.2    Shingler, V.3
  • 44
    • 0030447463 scopus 로고    scopus 로고
    • The transcription initiation pathway of sigma 54 mutants that bypass the enhancer protein requirement. Implications for the mechanism of activation
    • Wang, J.T., and Gralla, J.D. (1996) The transcription initiation pathway of sigma 54 mutants that bypass the enhancer protein requirement. Implications for the mechanism of activation. J Biol Chem 271: 32707-32713.
    • (1996) J Biol Chem , vol.271 , pp. 32707-32713
    • Wang, J.T.1    Gralla, J.D.2
  • 46
    • 0026070143 scopus 로고
    • The phosphorylated form of enhancer-binding protein NTRC has an ATPase activity that is essential for activation of transcription
    • Weiss, D.S., Batut, J., Klose, K.E., Keener, J., and Kustu, S. (1991) The phosphorylated form of enhancer-binding protein NTRC has an ATPase activity that is essential for activation of transcription. Cell 67: 155-167.
    • (1991) Cell , vol.67 , pp. 155-167
    • Weiss, D.S.1    Batut, J.2    Klose, K.E.3    Keener, J.4    Kustu, S.5


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