Finding pathogenicity islands and gene transfer events in genome data

Bioinformatics

Volumn 16, Issue 10, 2000, Pages 932-940

  Liò, Pietro ^a   Vannucci, Marina ^b  

^a UNIVERSITY OF CAMBRIDGE   (United Kingdom)

^b TEXAS A AND M UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL DNA; CYTOSINE; GUANINE;

ARTICLE; BACTERIAL GENE; BACTERIAL VIRULENCE; COMPUTER PROGRAM; DATA ANALYSIS; DATA BASE; DEINOCOCCUS RADIODURANS; GENE TRANSFER; GENETIC ANALYSIS; HELICOBACTER PYLORI; MATHEMATICAL COMPUTING; MATHEMATICAL GENETICS; NEISSERIA MENINGITIDIS; NONHUMAN; NUCLEOTIDE SEQUENCE; PATHOGENICITY; PRIORITY JOURNAL; SIGNAL TRANSDUCTION; STATISTICAL ANALYSIS; STRAIN DIFFERENCE; THEORY;

EID: 0033637404     PISSN: 13674803     EISSN: 13674811     Source Type: Journal    
DOI: 10.1093/bioinformatics/16.10.932     Document Type: Article

References (32)

1. Genomic-sequence comparison of two unrelated isolates of the human gastric pathogen Helicobacter pylori
2. Basic local alignment search tool
3. Wavelet scalograms and their application in economic time series
4. What can we learn with wavelets about DNA sequences
5. An Escherichia coli strain with all rRNA operons inactivated: Complete exchange of rRNA genes between bacteria
6. A wavelet analysis for time-series
7. Dimerization of the Agrobacterium tumefaciens VirB4 ATP-binding cassette mutations on the assembly and function of the T-DNA transporter
8. Ideal spatial adaption via wavelet shrinkage
9. Wavelet shrinkage: Asymptopia? (with discussion)
10. Relationships between genomic G+C content, RNA secondary structures, and optimal growth temperature in prokaryotes
11. Analyzing genomes with cumulative skew diagrams (1998)
12. Serum amyloid P component bound to gram-negative bacteria prevents lipopolysaccharide-mediated classical pathway complement activation
13. Pathogenicity islands of virulent bacteria: Structure, function and impact on microbial evolution
14. Cellular responses to postsegregational killing by restriction-modification genes
15. The hydrophobic core of proteins predicted by wavelet analysis
16. Comparative DNA analysis across diverse genomes
17. Wavelet change-point prediction of transmembrane proteins
18. A theory for multiresolution signal decomposition: The wavelet representation
19. The distribution of genes in the human genome
20. The discrete wavelet transform in S
21. Data dependent wavelet thresholding in nonparametric regression with change-point applications
22. Complete DNA sequence of a serogroup A strain of Neisseria menigitidis Z2491
23. Minimax estimation of sharp change points
24. On the genetic basis of variation and heterogeneity of DNA base composition
25. Directional mutation pressure, selective constraints and genetic equilibria
26. Complete genome sequence of Neisseria meningitidis serogroup B strain MC58
27. The complete genome sequence of the gastric pathogen Helicobacter pylori
28. Cloning and nucleotide sequence of frpC, a second gene from Neisseria meningitidis encoding a protein similar to RTX cytotoxins
29. Jump and sharp cusp detection by wavelets
30. Genome sequence of the radioresistant bacterium Deinococcus radiodurans R1