Specificity in the binding of aminoglycosides to HIV-RRE RNA

Biochemistry

Volumn 38, Issue 26, 1999, Pages 8548-8554

  Cho, Junhyeong ^a   Rando, Robert R ^a  

^a HARVARD MEDICAL SCHOOL   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

AMINOGLYCOSIDE; FRAMYCETIN; KANAMYCIN B; NEOMYCIN; PAROMOMYCIN; RNA;

ARTICLE; CONTROLLED STUDY; FLUORESCENCE SPECTROSCOPY; MUTATION; NONHUMAN; PRIORITY JOURNAL; PROTEIN BINDING; PROTEIN STRUCTURE; RNA PURIFICATION; RNA SYNTHESIS;

ANTI-BACTERIAL AGENTS; BINDING SITES; DNA MUTATIONAL ANALYSIS; FLUORESCENT DYES; FRAMYCETIN; GENE PRODUCTS, REV; HIV; PAROMOMYCIN; RESPONSE ELEMENTS; RHODAMINES; RNA, VIRAL;

EID: 0033614825     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi990273a     Document Type: Article

References (30)

1. Chambers, H. F., and Sande, M. A. (1996) Goodman & Gilman's The Pharmacological Basis of Therapeutics, p 1103, McGraw-Hill, New York.
2. Noller, H. F. (1991) Annu. Rev. Biochem. 60, 191-227.
3. Fourmy, D., Recht, M. I., Blanchard, S. C., and Puglisi, J. D. (1996) Science 274, 1367-1371.
4. Chow, C. S., and Bogdan, F. M. (1997) Chem. Rev. 97, 1489-1513.
5. Michael, K., and Tor, Y. (1998) Chem. Eur. J. 4, 2091-2098.
6. Hermann, T., and Westhof, E. (1998) Curr. Opin. Biotechnol. 9, 66-73.
7. von Ahsen, U., Davis, J., and Schroeder, R. (1991) Nature 353, 368-370.
8. Stage, T. K., Hertel, K. J., and Uhlenbeck, O. C. (1995) RNA 1, 95-101.
9. Zapp, M. L., Stern, S., and Green, M. R. (1993) Cell 74, 969-978.
10. Wang, Y., and Rando, R. R. (1995) Chem. Biol 2, 281-290.
11. Lato, S. M., Boles, A. R., and Ellington, A. D. (1995) Chem. Biol. 2, 219-303.
12. Wallis, M. G., von Asen, U., Schroeder, R., and Famulok, M. (1995) Chem. Biol. 2, 543-552.
13. Werstuck, G., Zapp, M. L., and Green, M. R. (1996) Chem. Biol. 3, 129-137.
14. Peterson, R. D., Bartel, D. P., Szostak, J. W., Horvath, S. J., and Feigon, J. (1994) Biochemistry 33, 5357-5366.
15. Bartel, D. P., Zapp, M. L., Green, M. R., and Szostak, J. W. (1991) Cell 67, 529-536.
16. Battiste, J. L., Mao, H., Rao, N. S., Tan, R., Muhandiram, D. R., Kay, L. E., Frankel, A. D., and Williamson, J. R. (1996) Science 273, 1547-1551.
17. Wang, Y., Hamasaki, K., and Rando, R. R. (1997) Biochemistry 36, 768-779.
18. Milligan, J. F., and Uhlenbeck, O. C. (1989) Methods Enzymol. 180, 51-62.
19. Jaeger, J. A., Turner, D. H., and Zuker, M. (1989) Methods Enzymol. 183, 281-306.
20. Noller, H. (1984) Annu. Rev. Biochem. 53, 119-162.
21. Morden, K. M., Chu, Y. G., Martin, F. H., and Tinoco, I., Jr. (1983) Biochemistry 22, 5557-5563.
22. Recht, M. I., Fourmy, D., Blanchard, S. C., Dahlquist, K. D., and Puglisi, J. D. (1996) J. Mol. Biol. 262, 421-436.
23. Wong, C-H., Hendrix, M., Priestley, E. S., and Greenberg, W. A. (1998) Chem. Biol. 5, 397-406.
24. Hendrix, M., Priestley, E. S., Joyce, G. F., and Wong, C.-H. (1997) J. Am. Chem. Soc. 119, 3641-3648.
25. Mei, H. Y., Cui, M., Heldsinger, A., Lemrow, S. M., Loo, J. A., Sannes-Lowery, K. A., Sharmeen, L., and Czarnik, A. W. (1998) Biochemistry 37, 14204-14212.
26. Hamasaki, K., Killian, J., Cho, J., and Rando, R. R. (1998) Biochemistry 37, 656-663.
27. Cho, J., Hamasaki, K., and Rando, R. R. (1998) Biochemistry 37, 4985-4992.
28. Weeks, K. M., and Crothers, D. M. (1993) Science 261, 1574-1577.
29. Calnan, B. J., Tidor, B., Biancalana, S., Hudson, D., and Frankel, A. D. (1991) Science 252, 1167-1171.
30. Weeks, K. M., and Crothers, D. M. (1991) Cell 66, 577-588.