Transfer RNA identity contributes to transition state stabilization during aminoacyl-tRNA synthesis

Nucleic Acids Research

Volumn 27, Issue 18, 1999, Pages 3631-3637

  Ibba, Michael ^a,b   Sever, Sanja ^a,c   Prætorius Ibba, Mette ^a,d   Söll, Dieter ^a  

^a YALE UNIVERSITY   (United States)

^b UNIVERSITY OF COPENHAGEN   (Denmark)

^c SCRIPPS RESEARCH INSTITUTE   (United States)

^d CARLSBERG LABORATORY   (Denmark)

Author keywords

[No Author keywords available]

Indexed keywords

AMINOACYL TRANSFER RNA; TRANSFER RNA; TRYPTOPHAN; TRYPTOPHAN TRANSFER RNA LIGASE;

AMINOACYLATION; ARTICLE; ESCHERICHIA COLI; FLUOROMETRY; KINETICS; MOLECULAR STABILITY; NONHUMAN; PRIORITY JOURNAL; RNA SYNTHESIS;

ADENOSINE MONOPHOSPHATE; BASE SEQUENCE; BINDING SITES; CATALYSIS; ESCHERICHIA COLI; FLUORESCENCE; KINETICS; MUTATION; NUCLEIC ACID CONFORMATION; RNA, TRANSFER, AMINO ACYL; RNA, TRANSFER, GLN; RNA, TRANSFER, TRP; SUBSTRATE SPECIFICITY; THERMODYNAMICS; TRYPTOPHAN; TRYPTOPHAN-TRNA LIGASE;

EID: 0033568665     PISSN: 03051048     EISSN: None     Source Type: Journal    
DOI: 10.1093/nar/27.18.3631     Document Type: Article

References (27)

1. Ibba, M., Curnow, A.W. and Söll, D. (1997) Trends Biochem. Sci., 22, 39-42.
2. Nureki, O., Vassylyev, D.G., Tateno, M., Shimada, A., Nakama, T., Fukai, S., Konno, M., Hendrickson, T.L., Schimmel, P. and Yokoyama, S. (1998) Science, 280, 578-582.
3. Hale, S.P., Auld, D.S., Schmidt, E. and Schimmel, P. (1997) Science, 276, 1250-1252.
4. First, E.A. (1998) In Sinnott, M.L. (ed.), Comprehensive Biological Catalysis. Academic Press, London, UK, pp. 573-607.
5. Fersht, A.R. (1984) Enzyme Structure and Mechanism, 2nd Edn. W.H. Freeman and Co., New York, NY.
6. Avis, J.M., Day, A.G., Garcia, G.A. and Fersht, A.R. (1993) Biochemistry, 32, 5312-5320.
7. Ibba, M., Johnson, C.M., Hennecke, H. and Fersht, A.R. (1995) FEBS Lett., 358, 293-296.
8. Trezeguet, V., Merle, M., Gandar, J.C. and Labouesse, B. (1986) Biochemistry, 25, 7125-7136.
9. Doublié, S., Bricogne, G., Gilmore, C. and Carter, C.W., Jr (1995) Structure, 3, 17-31.
10. Himeno, H., Hasegawa, T., Asahara, H., Tamura, K. and Shimizu, M. (1991) Nucleic Acids Res., 19, 6379-6382.
11. Merle, M., Trezeguet, V., Graves, P.V., Andrews, D., Muench, K.H. and Labouesse, B. (1986) Biochemistry, 25, 1115-1123.
12. Sever, S., Rogers, K., Rogers, J.M., Carter, C., Jr and Söll, D. (1996) Biochemistry, 35, 32-40.
13. Xue, H., Shen, W., Giegé, R. and Wong, J.T. (1993) J. Biol. Chem., 268, 9316-9322.
14. Rogers, M.J., Adachi, T., Inokuchi, H. and Söll, D. (1992) Proc. Natl Acad. Sci. USA, 89, 3463-3467.
15. Ibba, M., Hong, K.-W., Sherman, J.M., Sever, S. and Söll, D. (1996) Proc. Natl Acad. Sci. USA, 93, 6953-6958.
16. Curnow, A.W., Kung, F.L., Koch, K.A. and Garcia, G.A. (1993) Biochemistry, 32, 5239-5246.
17. Sambrook, J., Fritsch, E.F. and Maniatis, T. (1989) Molecular Cloning: A Laboratory Manual, 2nd Edn. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
18. Hoben, P. and Söll, D. (1985) Methods Enzymol., 113, 55-59.
19. Lloyd, A.J., Thomann, H.U., Ibba, M. and Söll, D. (1995) Nucleic Acids Res., 23, 2886-2892.
20. Avis, J.M. and Fersht, A.R. (1993) Biochemistry, 32, 5321-5326.
21. Fersht, A.R. (1987) Biochemistry, 26, 8031-8037.
22. Giegé, R., Sissler, M. and Florentz, C. (1998) Nucleic Acids Res., 26, 5017-5035.
23. Pope, A.J., Lapointe, J., Mensah, L., Benson, N., Brown, M.J. and Moore, K.J. (1998) J. Biol. Chem., 273, 31680-31690.
24. Arnez, J.G. and Moras, D. (1997) Trends Biochem. Sci., 22, 211-216.
25. Ebel, J.P., Giege, R., Bonnet, J., Kern, D., Befort, N., Bollack, C., Fasiolo, F., Gangloff, J. and Dirheimer, G. (1973) Biochimie, 55, 547-557.
26. Gale, A.J., Shi, J.P. and Schimmel, P. (1996) Biochemistry, 35, 608-615.
27. Schramm, V.L. (1998) Annu. Rev. Biochem., 67, 693-720.