-
1
-
-
0028044574
-
Evolutionary relationships among pyridoxal-5′-phosphate-dependent enzymes. Regio-specific alpha, beta and gamma families
-
Alexander F. W., Sandmeier E., Mehta P. K., Christen P. Evolutionary relationships among pyridoxal-5′-phosphate-dependent enzymes. Regio-specific alpha, beta and gamma families. Eur. J. Biochem. 219:1994;953-960.
-
(1994)
Eur. J. Biochem.
, vol.219
, pp. 953-960
-
-
Alexander, F.W.1
Sandmeier, E.2
Mehta, P.K.3
Christen, P.4
-
2
-
-
0030861438
-
The SWISS-PROT Protein Sequence Data Bank and its supplement TrEMBL
-
Bairoch A., Apweiler R. The SWISS-PROT Protein Sequence Data Bank and its supplement TrEMBL. Nucl. Acids Res. 25:1997;31-36.
-
(1997)
Nucl. Acids Res.
, vol.25
, pp. 31-36
-
-
Bairoch, A.1
Apweiler, R.2
-
3
-
-
0027412196
-
ALSCRIPT: A tool to format multiple sequence alignments
-
Barton G. J. ALSCRIPT: a tool to format multiple sequence alignments. Protein Eng. 6:1993;37-40.
-
(1993)
Protein Eng.
, vol.6
, pp. 37-40
-
-
Barton, G.J.1
-
4
-
-
84990669712
-
-
San Diego, California: Biosym Technologies, Inc.
-
Manual for InsightII. 1993;Biosym Technologies, Inc. San Diego, California.
-
(1993)
Manual for InsightII
-
-
-
6
-
-
0030595364
-
Crystal structure of the pyridoxal-5′-phosphate dependent cystathionine beta-lyase from Escherichia coli at 1.83 Å
-
Clausen T., Huber R., Laber B., Pohlenz H. D., Messerschmidt A. Crystal structure of the pyridoxal-5′-phosphate dependent cystathionine beta-lyase from Escherichia coli at 1.83 Å J. Mol. Biol. 262:1996;202-224.
-
(1996)
J. Mol. Biol.
, vol.262
, pp. 202-224
-
-
Clausen, T.1
Huber, R.2
Laber, B.3
Pohlenz, H.D.4
Messerschmidt, A.5
-
8
-
-
0031058188
-
Maximum-likelihood heavy-atom parameter refinement for the multiple isomorphous replacement and multiwavelength anomalous diffraction methods
-
S. W. Carter, & R. M. Sweet. New York: Academic Press
-
de La Fortelle E., Bricogne G. Maximum-likelihood heavy-atom parameter refinement for the multiple isomorphous replacement and multiwavelength anomalous diffraction methods. Carter S. W., Sweet R. M. Methods in Enzymology. 1997;472-494 Academic Press, New York.
-
(1997)
Methods in Enzymology
, pp. 472-494
-
-
De La Fortelle, E.1
Bricogne, G.2
-
9
-
-
0031569882
-
Crystal structure of the chemotaxis receptor methyltransferase CheR suggests a conserved structural motif for binding S-adenosylmethionine
-
Djordjevic S., Stock A. M. Crystal structure of the chemotaxis receptor methyltransferase CheR suggests a conserved structural motif for binding S-adenosylmethionine. Structure. 5:1997;545-558.
-
(1997)
Structure
, vol.5
, pp. 545-558
-
-
Djordjevic, S.1
Stock, A.M.2
-
10
-
-
79952608525
-
Accurate bond and angle parameters for X-ray protein structure refinement
-
Engh R. A., Huber R. Accurate bond and angle parameters for X-ray protein structure refinement. Acta Crystallog. sect. A. 47:1992;392-400.
-
(1992)
Acta Crystallog. Sect. a
, vol.47
, pp. 392-400
-
-
Engh, R.A.1
Huber, R.2
-
11
-
-
0019014846
-
Three-dimensional structure of a pyridoxal-phosphate-dependent enzyme, mitochondrial aspartate aminotransferase
-
Ford G. C., Eichele G., Jansonius J. N. Three-dimensional structure of a pyridoxal-phosphate-dependent enzyme, mitochondrial aspartate aminotransferase. Proc. Natl Acad. Sci. USA. 77:1980;2259-2563.
-
(1980)
Proc. Natl Acad. Sci. USA
, vol.77
, pp. 2259-2563
-
-
Ford, G.C.1
Eichele, G.2
Jansonius, J.N.3
-
12
-
-
0342961436
-
-
Pittsburgh: Biocrystallography LaboratoryVA Medical Center
-
Furey W. PHASES. 1989;Biocrystallography LaboratoryVA Medical Center, Pittsburgh.
-
(1989)
PHASES
-
-
Furey, W.1
-
14
-
-
0029981787
-
The reaction catalyzed by Escherichia coli aspartate aminotransferase has multiple partially rate-determining steps, while that catalyzed by the Y225F mutant is dominated by ketimine hydrolysis
-
Goldberg J. M., Kirsch J. F. The reaction catalyzed by Escherichia coli aspartate aminotransferase has multiple partially rate-determining steps, while that catalyzed by the Y225F mutant is dominated by ketimine hydrolysis. Biochemistry. 35:1996;5280-5291.
-
(1996)
Biochemistry
, vol.35
, pp. 5280-5291
-
-
Goldberg, J.M.1
Kirsch, J.F.2
-
16
-
-
0021112353
-
The covalent structure of mitochondrial aspartate aminotransferase from chicken. Identification of segments of the polypeptide chain invariant specifically in the mitochondrial isoenzyme
-
Graf-Hausner U., Wilson K. J., Christen P. The covalent structure of mitochondrial aspartate aminotransferase from chicken. Identification of segments of the polypeptide chain invariant specifically in the mitochondrial isoenzyme. J. Biol. Chem. 258:1983;8813-8826.
-
(1983)
J. Biol. Chem.
, vol.258
, pp. 8813-8826
-
-
Graf-Hausner, U.1
Wilson, K.J.2
Christen, P.3
-
19
-
-
0027944321
-
Crystallization and preliminary X-ray analysis of recombinant 1-aminocyclopropane-1-carboxylate synthase from apple. A key enzyme in the biosynthesis of the plant hormone ethylene
-
Hohenester E., White M. F., Kirsch J. F., Jansonius J. N. Crystallization and preliminary X-ray analysis of recombinant 1-aminocyclopropane-1-carboxylate synthase from apple. A key enzyme in the biosynthesis of the plant hormone ethylene. J. Mol. Biol. 243:1994;947-949.
-
(1994)
J. Mol. Biol.
, vol.243
, pp. 947-949
-
-
Hohenester, E.1
White, M.F.2
Kirsch, J.F.3
Jansonius, J.N.4
-
20
-
-
0027440362
-
Protein structure comparison by alignment of distance matrices
-
Holm L., Sander C. Protein structure comparison by alignment of distance matrices. J. Mol. Biol. 233:1993;123-138.
-
(1993)
J. Mol. Biol.
, vol.233
, pp. 123-138
-
-
Holm, L.1
Sander, C.2
-
22
-
-
0025913925
-
Two genes encoding 1-aminocyclopropane-1-carboxylate synthase in zucchini (Cucurbita pepo) are clustered and similar but differentially regulated
-
Huang P. L., Parks J. E., Rottmann W. H., Theologis A. Two genes encoding 1-aminocyclopropane-1-carboxylate synthase in zucchini (Cucurbita pepo) are clustered and similar but differentially regulated. Proc. Natl Acad. Sci. USA. 88:1991;7021-7025.
-
(1991)
Proc. Natl Acad. Sci. USA
, vol.88
, pp. 7021-7025
-
-
Huang, P.L.1
Parks, J.E.2
Rottmann, W.H.3
Theologis, A.4
-
23
-
-
0030039296
-
PROMOTIF-a program to identify and analyze structural motifs in proteins
-
Hutchinson E. G., Thornton J. M. PROMOTIF-a program to identify and analyze structural motifs in proteins. Protein Sci. 5:1996;212-220.
-
(1996)
Protein Sci.
, vol.5
, pp. 212-220
-
-
Hutchinson, E.G.1
Thornton, J.M.2
-
24
-
-
0031297461
-
Specific versus non-specific contacts in protein crystals
-
Janin J. Specific versus non-specific contacts in protein crystals. Nature Struct. Biol. 4:1997;973-974.
-
(1997)
Nature Struct. Biol.
, vol.4
, pp. 973-974
-
-
Janin, J.1
-
26
-
-
0000693863
-
Structural basis for catalysis by aspartate aminotransferase
-
F. A. Jurnak, & A. McPherson. New York: J. Wiley & Sons
-
Jansonius J. N., Vincent M. G. Structural basis for catalysis by aspartate aminotransferase. Jurnak F. A., McPherson A. Biological Macromolecules & Assemblies: Active Sites of Enzymes. 1987;187-285 J. Wiley & Sons, New York.
-
(1987)
Biological Macromolecules & Assemblies: Active Sites of Enzymes
, pp. 187-285
-
-
Jansonius, J.N.1
Vincent, M.G.2
-
27
-
-
84889120137
-
Improved methods for building protein models in electron density maps and the location of errors in these models
-
Jones T. A., Zou J.-Y., Cowan S. W., Kjeldgaard M. Improved methods for building protein models in electron density maps and the location of errors in these models. Acta Crystallog. sect. A. 47, 1991;110-119.
-
(1991)
Acta Crystallog. Sect. a
, vol.47
, pp. 110-119
-
-
Jones, T.A.1
Zou, J.-Y.2
Cowan, S.W.3
Kjeldgaard, M.4
-
28
-
-
0021634693
-
Mechanism of action of aspartate aminotransferase proposed on the basis of its spatial structure
-
Kirsch J. F., Eichele G., Ford G. C., Vincent M. G., Jansonius J. N., Gehring H., Christen P. Mechanism of action of aspartate aminotransferase proposed on the basis of its spatial structure. J. Mol. Biol. 174:1984;497-525.
-
(1984)
J. Mol. Biol.
, vol.174
, pp. 497-525
-
-
Kirsch, J.F.1
Eichele, G.2
Ford, G.C.3
Vincent, M.G.4
Jansonius, J.N.5
Gehring, H.6
Christen, P.7
-
29
-
-
0026244229
-
MOLSCRIPT: A program to produce both detailed and schematic plots of protein structures
-
Kraulis P. J. MOLSCRIPT: a program to produce both detailed and schematic plots of protein structures. J. Appl. Crystallog. 24:1991;946-950.
-
(1991)
J. Appl. Crystallog.
, vol.24
, pp. 946-950
-
-
Kraulis, P.J.1
-
30
-
-
0029958546
-
A novel bifunctional fusion enzyme catalyzing ethylene synthesis via 1-aminocyclopropane1-carboxylic acid
-
Li N., Jiang X. N., Cai G. P., Yang S. F. A novel bifunctional fusion enzyme catalyzing ethylene synthesis via 1-aminocyclopropane1-carboxylic acid. J. Biol. Chem. 271:1996;25738-25741.
-
(1996)
J. Biol. Chem.
, vol.271
, pp. 25738-25741
-
-
Li, N.1
Jiang, X.N.2
Cai, G.P.3
Yang, S.F.4
-
31
-
-
0030695497
-
Kinetic and spectroscopic investigations of wild-type and mutant forms of apple 1-aminocyclopropane-1-carboxylate synthase
-
Li Y., Feng L., Kirsch J. F. Kinetic and spectroscopic investigations of wild-type and mutant forms of apple 1-aminocyclopropane-1-carboxylate synthase. Biochemistry. 36:1997;15477-15488.
-
(1997)
Biochemistry
, vol.36
, pp. 15477-15488
-
-
Li, Y.1
Feng, L.2
Kirsch, J.F.3
-
32
-
-
0027764344
-
Protein sequence alignments: A strategy for the hierarchical analysis of residue conservation
-
Livingstone C. D., Barton G. J. Protein sequence alignments: a strategy for the hierarchical analysis of residue conservation. Comput. Appl. Biosci. 9:1993;745-756.
-
(1993)
Comput. Appl. Biosci.
, vol.9
, pp. 745-756
-
-
Livingstone, C.D.1
Barton, G.J.2
-
33
-
-
0026751404
-
X-ray structure refinement and comparison of three forms of mitochondrial aspartate aminotransferase
-
McPhalen C. A., Vincent M. G., Jansonius J. N. X-ray structure refinement and comparison of three forms of mitochondrial aspartate aminotransferase. J. Mol. Biol. 225:1992a;495-517.
-
(1992)
J. Mol. Biol.
, vol.225
, pp. 495-517
-
-
McPhalen, C.A.1
Vincent, M.G.2
Jansonius, J.N.3
-
34
-
-
0026767761
-
Domain closure in mitochondrial aspartate aminotransferase
-
McPhalen C. A., Vincent M. G., Picot D., Jansonius J. N., Lesk A. M., Chothia C. Domain closure in mitochondrial aspartate aminotransferase. J. Mol. Biol. 227:1992b;197-213.
-
(1992)
J. Mol. Biol.
, vol.227
, pp. 197-213
-
-
McPhalen, C.A.1
Vincent, M.G.2
Picot, D.3
Jansonius, J.N.4
Lesk, A.M.5
Chothia, C.6
-
35
-
-
0028358526
-
Homology of 1-aminocyclopropane-1-carboxylate synthase, 8-amino-7-oxononanoate synthase, 2-amino-6-caprolactam racemase, 2,2- dialkylglycine decarboxylase, glutamate-1-semialdehyde 2,1-aminomutase and isopenicillin-N-epimerase with aminotransferases
-
Mehta P. K., Christen P. Homology of 1-aminocyclopropane-1-carboxylate synthase, 8-amino-7-oxononanoate synthase, 2-amino-6-caprolactam racemase, 2,2- dialkylglycine decarboxylase, glutamate-1-semialdehyde 2,1-aminomutase and isopenicillin-N-epimerase with aminotransferases. Biochem. Biophys. Res. Commun. 198:1994;138-143.
-
(1994)
Biochem. Biophys. Res. Commun.
, vol.198
, pp. 138-143
-
-
Mehta, P.K.1
Christen, P.2
-
36
-
-
0027297771
-
Aminotransferases: Demonstration of homology and division into evolutionary subgroups
-
Mehta P. K., Hale T. I., Christen P. Aminotransferases: demonstration of homology and division into evolutionary subgroups. Eur. J. Biochem. 214:1993;549-561.
-
(1993)
Eur. J. Biochem.
, vol.214
, pp. 549-561
-
-
Mehta, P.K.1
Hale, T.I.2
Christen, P.3
-
37
-
-
0030815133
-
Raster3D photorealistic molecular graphics
-
S. W. Carter, & R. M. Sweet. New York: Academic Press
-
Merritt E. A., Murphy M. E. P. Raster3D photorealistic molecular graphics. Carter S. W., Sweet R. M. Methods in Enzymology. 1997;505-524 Academic Press, New York.
-
(1997)
Methods in Enzymology
, pp. 505-524
-
-
Merritt, E.A.1
Murphy, M.E.P.2
-
38
-
-
0002580781
-
Simplified error estimation a la Cruickshank in macromolecular crystallography
-
Murshudov G. N., Dodson E. J. Simplified error estimation a la Cruickshank in macromolecular crystallography. CCP4 Newsletter. 33:1997;31-35.
-
(1997)
CCP4 Newsletter
, vol.33
, pp. 31-35
-
-
Murshudov, G.N.1
Dodson, E.J.2
-
39
-
-
0000732609
-
GRASP graphical representation and analysis of surface properties
-
Nicholls A., Bharadwaj R., Honig B. GRASP graphical representation and analysis of surface properties. Biophys. J. 64:1993;A166.
-
(1993)
Biophys. J.
, vol.64
, pp. 166
-
-
Nicholls, A.1
Bharadwaj, R.2
Honig, B.3
-
40
-
-
0025933435
-
Reversible inhibition of tomato fruit senescesce by antisense RNA
-
Oeller P. W., Lu M. W., Taylor L. P., Pike D. A., Theologis A. Reversible inhibition of tomato fruit senescesce by antisense RNA. Science. 254:1991;437-439.
-
(1991)
Science
, vol.254
, pp. 437-439
-
-
Oeller, P.W.1
Lu, M.W.2
Taylor, L.P.3
Pike, D.A.4
Theologis, A.5
-
42
-
-
0039573058
-
Stereochemical course of the reaction catalyzed by the pyridoxal phosphate-dependent enzyme 1-aminocyclopropane-1-carboxylate synthase
-
Ramalingam K., Lee K. M., Woodard R. W., Bleecker A. B., Kende H. Stereochemical course of the reaction catalyzed by the pyridoxal phosphate-dependent enzyme 1-aminocyclopropane-1-carboxylate synthase. Proc. Natl Acad. Sci. USA. 82:1985;7820-7824.
-
(1985)
Proc. Natl Acad. Sci. USA
, vol.82
, pp. 7820-7824
-
-
Ramalingam, K.1
Lee, K.M.2
Woodard, R.W.3
Bleecker, A.B.4
Kende, H.5
-
43
-
-
0030845064
-
Refinement and comparisons of the crystal structures of pig cytosolic aspartate aminotransferase and its complex with 2-methylaspartate
-
Rhee S., Silva M. M., Hyde C. C., Rogers P. H., Metzler C. M., Metzler D. E., Arnone A. Refinement and comparisons of the crystal structures of pig cytosolic aspartate aminotransferase and its complex with 2-methylaspartate. J. Biol. Chem. 272:1997;17293-17302.
-
(1997)
J. Biol. Chem.
, vol.272
, pp. 17293-17302
-
-
Rhee, S.1
Silva, M.M.2
Hyde, C.C.3
Rogers, P.H.4
Metzler, C.M.5
Metzler, D.E.6
Arnone, A.7
-
44
-
-
0030040323
-
Reduced surface: An efficient way to compute molecular surfaces
-
Sanner M. F., Spehner J.-C., Olson A. J. Reduced surface: an efficient way to compute molecular surfaces. Biopolymers. 38:1996;305-320.
-
(1996)
Biopolymers
, vol.38
, pp. 305-320
-
-
Sanner, M.F.1
Spehner, J.-C.2
Olson, A.J.3
-
45
-
-
0031571665
-
Human ornithine aminotransferase complexed with L-canaline and gabaculine: Structural basis for substrate recognition
-
Shah S. A., Shen B. W., Brünger A. T. Human ornithine aminotransferase complexed with L-canaline and gabaculine: structural basis for substrate recognition. Structure. 5:1997;1067-1075.
-
(1997)
Structure
, vol.5
, pp. 1067-1075
-
-
Shah, S.A.1
Shen, B.W.2
Brünger, A.T.3
-
46
-
-
0032549664
-
Crystal structure of human recombinant ornithine aminotransferase
-
Shen B. W., Hennig M., Hohenester E., Jansonius J. N., Schirmer T. Crystal structure of human recombinant ornithine aminotransferase. J. Mol. Biol. 277:1998;81-102.
-
(1998)
J. Mol. Biol.
, vol.277
, pp. 81-102
-
-
Shen, B.W.1
Hennig, M.2
Hohenester, E.3
Jansonius, J.N.4
Schirmer, T.5
-
47
-
-
0033534388
-
Crystal structure of human ornithine aminotransferase complexed with the highly specific and potent inhibitor 5-fluoromethylornithine
-
Storici P., Capitani G., Müller R., Schirmer T., Jansonius J. N. Crystal structure of human ornithine aminotransferase complexed with the highly specific and potent inhibitor 5-fluoromethylornithine. J. Mol. Biol. 285:1999;297-309.
-
(1999)
J. Mol. Biol.
, vol.285
, pp. 297-309
-
-
Storici, P.1
Capitani, G.2
Müller, R.3
Schirmer, T.4
Jansonius, J.N.5
-
48
-
-
0032544114
-
Random mutagenesis of 1-aminocyclopropane-1-carboxylate synthase: A key enzyme in ethylene biosynthesis
-
Tarun A. S., Lee J. S., Theologis A. Random mutagenesis of 1-aminocyclopropane-1-carboxylate synthase: a key enzyme in ethylene biosynthesis. Proc. Natl Acad. Sci. USA. 95:1998;9796-9801.
-
(1998)
Proc. Natl Acad. Sci. USA
, vol.95
, pp. 9796-9801
-
-
Tarun, A.S.1
Lee, J.S.2
Theologis, A.3
-
49
-
-
0026627761
-
One rotten apple spoils the whole bushel: The role of ethylene in fruit ripening
-
Theologis A. One rotten apple spoils the whole bushel: the role of ethylene in fruit ripening. Cell. 70:1992;181-184.
-
(1992)
Cell
, vol.70
, pp. 181-184
-
-
Theologis, A.1
-
50
-
-
0028604575
-
Expression of apple 1-aminocyclopropane-1-carboxylate synthase in Escherichia coli: Kinetic characterization of wild-type and active-site mutant forms
-
White M. F., Vasquez J., Yang S. F., Kirsch J. F. Expression of apple 1-aminocyclopropane-1-carboxylate synthase in Escherichia coli: kinetic characterization of wild-type and active-site mutant forms. Proc. Natl Acad. Sci. USA. 91:1994;12428-12432.
-
(1994)
Proc. Natl Acad. Sci. USA
, vol.91
, pp. 12428-12432
-
-
White, M.F.1
Vasquez, J.2
Yang, S.F.3
Kirsch, J.F.4
-
51
-
-
0001212489
-
Ethylene biosynthesis and its regulation in higher plants
-
Yang S. F., Hoffmann N. E. Ethylene biosynthesis and its regulation in higher plants. Annu. Rev. Plant. Physiol. 35:1984;155-189.
-
(1984)
Annu. Rev. Plant. Physiol.
, vol.35
, pp. 155-189
-
-
Yang, S.F.1
Hoffmann, N.E.2
-
52
-
-
0028693407
-
Ethylene biosynthesis and action: A case of conservation
-
Zarembinski T. I., Theologis A. Ethylene biosynthesis and action: a case of conservation. Plant Mol. Biol. 26:1994;1579-1597.
-
(1994)
Plant Mol. Biol.
, vol.26
, pp. 1579-1597
-
-
Zarembinski, T.I.1
Theologis, A.2
|