-
2
-
-
0027181134
-
The PROSITE dictionary of sites and patterns in proteins, its current status
-
Bairoch, A. (1993) The PROSITE dictionary of sites and patterns in proteins, its current status. Nucleic Acids Res., 21, 3097-3103.
-
(1993)
Nucleic Acids Res.
, vol.21
, pp. 3097-3103
-
-
Bairoch, A.1
-
4
-
-
0024571640
-
The helix-turn-helix DNA binding motif
-
Brennan, R.G. and Matthews, B.W. (1989) The helix-turn-helix DNA binding motif. J. Biol. Chem., 264, 1903-1906.
-
(1989)
J. Biol. Chem.
, vol.264
, pp. 1903-1906
-
-
Brennan, R.G.1
Matthews, B.W.2
-
5
-
-
0032512801
-
A symmetric-iterated multiple alignment of protein sequences
-
Brocchieri, L. and Karlin, S. (1998) A symmetric-iterated multiple alignment of protein sequences. J. Mol. Biol., 276, 249-264.
-
(1998)
J. Mol. Biol.
, vol.276
, pp. 249-264
-
-
Brocchieri, L.1
Karlin, S.2
-
6
-
-
0030093114
-
A flexible motif search technique based on generalized profiles
-
Bucher, P., Karplus, K., Moeri, N. and Hofman, K. (1996) A flexible motif search technique based on generalized profiles. Comput. Chem., 20, 3-23.
-
(1996)
Comput. Chem.
, vol.20
, pp. 3-23
-
-
Bucher, P.1
Karplus, K.2
Moeri, N.3
Hofman, K.4
-
7
-
-
0032561249
-
New goals for the U.S. Human Genome Project: 1998-2003
-
Collins, F.S., Patrinos, A., Jordan, E., Chakravarti, A., Gesteland, R., Walters, L. and the members of the DOE and NIH planning groups, (1998) New goals for the U.S. Human Genome Project: 1998-2003. Science, 282, 682-689.
-
(1998)
Science
, vol.282
, pp. 682-689
-
-
Collins, F.S.1
Patrinos, A.2
Jordan, E.3
Chakravarti, A.4
Gesteland, R.5
Walters, L.6
-
8
-
-
0030793767
-
De novo protein design: Fully automated sequence selection
-
Dahiyat, B.I. and Mayo, S.L. (1997) De novo protein design: fully automated sequence selection. Science, 278, 82-87.
-
(1997)
Science
, vol.278
, pp. 82-87
-
-
Dahiyat, B.I.1
Mayo, S.L.2
-
9
-
-
0030623575
-
All in one: A highly detailed rotamer library improves both accuracy and speed in the modelling of sidechains by dead-end elimination
-
De Maeyer, M., Desmet, J. and Lasters, I. (1997) All in one: a highly detailed rotamer library improves both accuracy and speed in the modelling of sidechains by dead-end elimination. Fold. Des., 2, 53-66.
-
(1997)
Fold. Des.
, vol.2
, pp. 53-66
-
-
De Maeyer, M.1
Desmet, J.2
Lasters, I.3
-
10
-
-
0026668613
-
MATCH-BOX: A fundamentally new algorithm for the simultaneous alignment of several protein sequences
-
Depiereux, E. and Feytmans, E. (1992) MATCH-BOX: a fundamentally new algorithm for the simultaneous alignment of several protein sequences. Comput. Appl. Biosci., 8, 501-509.
-
(1992)
Comput. Appl. Biosci.
, vol.8
, pp. 501-509
-
-
Depiereux, E.1
Feytmans, E.2
-
11
-
-
0032144120
-
Computer search algorithms in protein modification and design
-
Desjarlais, J.R. and Clarke, N.D. (1998) Computer search algorithms in protein modification and design. Curr. Opin. Struct. Biol., 8, 471-475.
-
(1998)
Curr. Opin. Struct. Biol.
, vol.8
, pp. 471-475
-
-
Desjarlais, J.R.1
Clarke, N.D.2
-
12
-
-
0026589733
-
The dead-end elimination theorem and its use in protein side-chain positioning
-
Desmet, J., De Maeyer, M., Hazes, B. and Lasters, I. (1992) The dead-end elimination theorem and its use in protein side-chain positioning. Nature, 356, 539-542.
-
(1992)
Nature
, vol.356
, pp. 539-542
-
-
Desmet, J.1
De Maeyer, M.2
Hazes, B.3
Lasters, I.4
-
13
-
-
0028212927
-
Efficient rotamer elimination applied to protein side-chains and related spin glasses
-
Goldstein, R.F. (1994) Efficient rotamer elimination applied to protein side-chains and related spin glasses. Biophys. J., 66, 1335-1340.
-
(1994)
Biophys. J.
, vol.66
, pp. 1335-1340
-
-
Goldstein, R.F.1
-
14
-
-
0030582739
-
Significant improvement in accuracy of multiple protein sequence alignments by iterative refinement as assessed by reference to structural alignments
-
Gotoh, O. (1996) Significant improvement in accuracy of multiple protein sequence alignments by iterative refinement as assessed by reference to structural alignments. J. Mol. Biol., 264, 823-838.
-
(1996)
J. Mol. Biol.
, vol.264
, pp. 823-838
-
-
Gotoh, O.1
-
15
-
-
0029937427
-
Scores for sequence searches and alignments
-
Henikoff, S. (1996) Scores for sequence searches and alignments. Curr. Opin. Struct. Biol., 6, 353-360.
-
(1996)
Curr. Opin. Struct. Biol.
, vol.6
, pp. 353-360
-
-
Henikoff, S.1
-
16
-
-
0026458378
-
Amino acid substitution matrices from protein blocks
-
Henikoff, S. and Henikoff, J.G. (1992) Amino acid substitution matrices from protein blocks. Proc. Natl. Acad. Sci. USA, 89, 10915-10919.
-
(1992)
Proc. Natl. Acad. Sci. USA
, vol.89
, pp. 10915-10919
-
-
Henikoff, S.1
Henikoff, J.G.2
-
17
-
-
0028825276
-
Automated construction and graphical presentation of protein blocks from unaligned sequences
-
Henikoff, S., Henikoff, J.G., Alford, W.J. and Pietrokovski, S. (1995) Automated construction and graphical presentation of protein blocks from unaligned sequences. Gene, 163, GC17-GC26.
-
(1995)
Gene
, vol.163
-
-
Henikoff, S.1
Henikoff, J.G.2
Alford, W.J.3
Pietrokovski, S.4
-
18
-
-
0028232955
-
Searching protein structure databases has come of age
-
Holm, L. and Sander, C. (1994) Searching protein structure databases has come of age. Proteins, 19, 165-173.
-
(1994)
Proteins
, vol.19
, pp. 165-173
-
-
Holm, L.1
Sander, C.2
-
19
-
-
0027493639
-
The fuzzy-end elimination theorem:correctly implementing the side chain placement algorithm based on thedead-end elimination theorem
-
Lasters, I. and Desmet, J. (1993) The fuzzy-end elimination theorem:correctly implementing the side chain placement algorithm based on thedead-end elimination theorem. Protein Eng., 6, 717-722.
-
(1993)
Protein Eng.
, vol.6
, pp. 717-722
-
-
Lasters, I.1
Desmet, J.2
-
20
-
-
0028826985
-
Enhanced dead-end elimination in the search for the global minimum energy conformation of a collection of protein side chains
-
Lasters, I., De Maeyer, M. and Desmet, J. (1995) Enhanced dead-end elimination in the search for the global minimum energy conformation of a collection of protein side chains. Protein Eng., 8, 815-822.
-
(1995)
Protein Eng.
, vol.8
, pp. 815-822
-
-
Lasters, I.1
De Maeyer, M.2
Desmet, J.3
-
21
-
-
0027912333
-
Detecting subtle sequence signals: A Gibbs sampling strategy for multiple alignment
-
Lawrence, C.E., Altschul, S.F., Boguski, M.S., Liu, J.S., Neuwald, A.F. and Wooton, J.C. (1993) Detecting subtle sequence signals: a Gibbs sampling strategy for multiple alignment. Science, 262, 208-214.
-
(1993)
Science
, vol.262
, pp. 208-214
-
-
Lawrence, C.E.1
Altschul, S.F.2
Boguski, M.S.3
Liu, J.S.4
Neuwald, A.F.5
Wooton, J.C.6
-
22
-
-
0026524083
-
Multiple alignment using simulated annealing: Branch point definition in human mRNA splicing
-
Lukashin, A.V., Engelbrecht, J. and Brunak, S. (1992) Multiple alignment using simulated annealing: branch point definition in human mRNA splicing. Nucleic Acids Res., 20, 2511-2516.
-
(1992)
Nucleic Acids Res.
, vol.20
, pp. 2511-2516
-
-
Lukashin, A.V.1
Engelbrecht, J.2
Brunak, S.3
-
23
-
-
0032574769
-
How evolution makes proteins fold quickly
-
Mirny, L.A., Abkevich, V.I. and Shakhnovich, E.I. (1998) How evolution makes proteins fold quickly. Proc. Natl. Acad. Sci. USA, 95, 4976-4981.
-
(1998)
Proc. Natl. Acad. Sci. USA
, vol.95
, pp. 4976-4981
-
-
Mirny, L.A.1
Abkevich, V.I.2
Shakhnovich, E.I.3
-
24
-
-
0026100921
-
A workbench for multiple alignment construction and analysis
-
Shuler, G.D., Altschul, S.F. and Lipman, D.J. (1991) A workbench for multiple alignment construction and analysis. Proteins, 9, 180-190.
-
(1991)
Proteins
, vol.9
, pp. 180-190
-
-
Shuler, G.D.1
Altschul, S.F.2
Lipman, D.J.3
-
25
-
-
0025017156
-
Finding sequence motifs in groups of functionally related proteins
-
Smith, H.O., Annau, T.M. and Chandrasegaran, S. (1990) Finding sequence motifs in groups of functionally related proteins. Proc. Natl. Acad. Sci. USA, 87, 826-830.
-
(1990)
Proc. Natl. Acad. Sci. USA
, vol.87
, pp. 826-830
-
-
Smith, H.O.1
Annau, T.M.2
Chandrasegaran, S.3
-
26
-
-
0000133199
-
Identifying protein-binding sites from unaligned DNA fragments
-
Stormo, G.D. and Hartzell, G.W. III (1989) Identifying protein-binding sites from unaligned DNA fragments. Proc. Natl. Acad. Sci. USA, 86, 1183-1187.
-
(1989)
Proc. Natl. Acad. Sci. USA
, vol.86
, pp. 1183-1187
-
-
Stormo, G.D.1
Hartzell III, G.W.2
-
27
-
-
0028679709
-
On the complexity of multiple sequence alignment
-
Wang, L. and Jiang, T. (1994) On the complexity of multiple sequence alignment. J. Comput. Biol., 1, 337-348.
-
(1994)
J. Comput. Biol.
, vol.1
, pp. 337-348
-
-
Wang, L.1
Jiang, T.2
-
28
-
-
0029448177
-
A simplified proof of the NP- and MAX SNP-hardness of multiple sequence tree alignment
-
Wareham, H.T. (1995) A simplified proof of the NP- and MAX SNP-hardness of multiple sequence tree alignment. J. Comput. Biol., 2, 509-514.
-
(1995)
J. Comput. Biol.
, vol.2
, pp. 509-514
-
-
Wareham, H.T.1
-
29
-
-
0025343113
-
Consensus methods for DNA and protein sequence alignment
-
Waterman, M.S. and Jones, M.S. (1990) Consensus methods for DNA and protein sequence alignment. Methods Enzymol., 183, 221-237.
-
(1990)
Methods Enzymol.
, vol.183
, pp. 221-237
-
-
Waterman, M.S.1
Jones, M.S.2
|