-
1
-
-
0028835443
-
Nucleation mechanism for protein folding and theoretical predictions for hydrogen-exchange labeling experiments
-
Thirumalai D, Guo Z. Nucleation mechanism for protein folding and theoretical predictions for hydrogen-exchange labeling experiments. Biopolymers 1994;35:137-140.
-
(1994)
Biopolymers
, vol.35
, pp. 137-140
-
-
Thirumalai, D.1
Guo, Z.2
-
2
-
-
0028947257
-
Funnels, pathways, and the energy landscape of protein folding: A synthesis
-
Bryngelson JD, Onuchic JN, Socci ND, Wolynes PG. Funnels, pathways, and the energy landscape of protein folding: a synthesis. Proteins 1995;21:167-195.
-
(1995)
Proteins
, vol.21
, pp. 167-195
-
-
Bryngelson, J.D.1
Onuchic, J.N.2
Socci, N.D.3
Wolynes, P.G.4
-
3
-
-
0028929556
-
Principles of protein folding: A perspective from simple exact models
-
Dill KA, Bromberg S, Yue K, Fiebig KM, Yee DP, Thomas PD, Chan HS. Principles of protein folding: a perspective from simple exact models. Protein Science 1995;4:561-602.
-
(1995)
Protein Science
, vol.4
, pp. 561-602
-
-
Dill, K.A.1
Bromberg, S.2
Yue, K.3
Fiebig, K.M.4
Yee, D.P.5
Thomas, P.D.6
Chan, H.S.7
-
4
-
-
0028917296
-
Structures of folding intermediates
-
Ptitsyn OB. Structures of folding intermediates. Curr Opin Struct Biol 1995;5:74-78.
-
(1995)
Curr Opin Struct Biol
, vol.5
, pp. 74-78
-
-
Ptitsyn, O.B.1
-
6
-
-
0029790358
-
Packing at the protein-water interface
-
Gerstein M, Chothia C. Packing at the protein-water interface. Proc Natl Acad Sci USA 1996;93:10167-10172.
-
(1996)
Proc Natl Acad Sci USA
, vol.93
, pp. 10167-10172
-
-
Gerstein, M.1
Chothia, C.2
-
8
-
-
0029992278
-
Molecular chaperones in cellular protein folding
-
Hartl F-U. Molecular chaperones in cellular protein folding. Nature 1996; 381:571-580.
-
(1996)
Nature
, vol.381
, pp. 571-580
-
-
Hartl, F.-U.1
-
10
-
-
0032464019
-
GroEL/GroES: Structure and function of a two-stroke folding machine
-
Xu Z, Sigler PB. GroEL/GroES: structure and function of a two-stroke folding machine. J Struct Biol 1 1998;24:129-141.
-
(1998)
J Struct Biol 1
, vol.24
, pp. 129-141
-
-
Xu, Z.1
Sigler, P.B.2
-
11
-
-
0033617129
-
GroEL-GroES cycling: ATP and nonnative polypeptide direct alteration of folding-active rings
-
Rye HS, Roseman AM, Chen S, Furtak C, Fenton WA, Saibil, HR, Horwich AL. GroEL-GroES cycling: ATP and nonnative polypeptide direct alteration of folding-active rings. Cell 1999;97:325-338.
-
(1999)
Cell
, vol.97
, pp. 325-338
-
-
Rye, H.S.1
Roseman, A.M.2
Chen, S.3
Furtak, C.4
Fenton, W.A.5
Saibil, H.R.6
Horwich, A.L.7
-
12
-
-
0031684079
-
Structure and function in GroEL-mediated protein folding
-
Sigler PB, Xu Z, Rye HS, Burston SG, Fenton WA, Horwich A. Structure and function in GroEL-mediated protein folding. Annu Rev Biochem 1998;67:581-608.
-
(1998)
Annu Rev Biochem
, vol.67
, pp. 581-608
-
-
Sigler, P.B.1
Xu, Z.2
Rye, H.S.3
Burston, S.G.4
Fenton, W.A.5
Horwich, A.6
-
13
-
-
0030592538
-
The chaperonin ATPase cycle: Mechanism of allosteric switching and movements of substrate-binding domains in GroEL
-
Roseman AM, Chen S, White H, Braig K, Saibil HR. The chaperonin ATPase cycle: mechanism of allosteric switching and movements of substrate-binding domains in GroEL. Cell 1996;87:241-251.
-
(1996)
Cell
, vol.87
, pp. 241-251
-
-
Roseman, A.M.1
Chen, S.2
White, H.3
Braig, K.4
Saibil, H.R.5
-
14
-
-
0023605604
-
Two states of water found in hydrophobic clefts: Their possible contribution to mechanisms of cation pumps and other enzymes
-
Wiggins PM, MacClement BAE. Two states of water found in hydrophobic clefts: their possible contribution to mechanisms of cation pumps and other enzymes. Int Rev Cytol 1987;108:249-303.
-
(1987)
Int Rev Cytol
, vol.108
, pp. 249-303
-
-
Wiggins, P.M.1
MacClement, B.A.E.2
-
15
-
-
0028921999
-
Demonstration of positionally disordered water within a protein hydrophobic cavity by NMR
-
Ernst JA, Clubb RT, Zhou H-X, Gronenborn AM, Clore GM. Demonstration of positionally disordered water within a protein hydrophobic cavity by NMR. Science 1995;267:1813-1817.
-
(1995)
Science
, vol.267
, pp. 1813-1817
-
-
Ernst, J.A.1
Clubb, R.T.2
Zhou, H.-X.3
Gronenborn, A.M.4
Clore, G.M.5
-
16
-
-
0029746155
-
Direct evidence for modified solvent structure within the hydration shell of a hydrophobic amino acid
-
Pertsemlidis A, Saxena AM, Soper AK, Head-Gordon T, Glaeser RM. Direct evidence for modified solvent structure within the hydration shell of a hydrophobic amino acid. Proc Natl Acad Sci USA 1996;93:10769-10774.
-
(1996)
Proc Natl Acad Sci USA
, vol.93
, pp. 10769-10774
-
-
Pertsemlidis, A.1
Saxena, A.M.2
Soper, A.K.3
Head-Gordon, T.4
Glaeser, R.M.5
-
17
-
-
0033524454
-
Disordered water within a hydrophobic cavity visualized by x-ray crystallography
-
Yu B, Blaber M, Gronenborn AM, Clore GM, Caspar DLD. Disordered water within a hydrophobic cavity visualized by x-ray crystallography. Proc Natl Acad Sci USA 1999;96:103-108.
-
(1999)
Proc Natl Acad Sci USA
, vol.96
, pp. 103-108
-
-
Yu, B.1
Blaber, M.2
Gronenborn, A.M.3
Clore, G.M.4
Caspar, D.L.D.5
-
18
-
-
0031577320
-
Calculations of the dielectric properties of a protein and its solvent: Theory and case study
-
Löffler G, Schreiber H, Steinhauser O. Calculations of the dielectric properties of a protein and its solvent: theory and case study. J Mol Biol 1997;270:520-534.
-
(1997)
J Mol Biol
, vol.270
, pp. 520-534
-
-
Löffler, G.1
Schreiber, H.2
Steinhauser, O.3
-
19
-
-
0029937870
-
Hydrophobicity of cavities in proteins
-
Zhang L, Hermans J. Hydrophobicity of cavities in proteins. Proteins 1996;24:433-438.
-
(1996)
Proteins
, vol.24
, pp. 433-438
-
-
Zhang, L.1
Hermans, J.2
-
20
-
-
0028928260
-
What is remembered and why?
-
Klibanov AM. What is remembered and why? Nature 1995;374:596.
-
(1995)
Nature
, vol.374
, pp. 596
-
-
Klibanov, A.M.1
-
22
-
-
0027815738
-
Hydration of biological macromolecules in solution: Surface structure and molecular recognition
-
Wüthrich K. Hydration of biological macromolecules in solution: surface structure and molecular recognition. Cold Spring Harbor Symp Quant Biol 1993;58:149-157.
-
(1993)
Cold Spring Harbor Symp Quant Biol
, vol.58
, pp. 149-157
-
-
Wüthrich, K.1
-
23
-
-
0030853055
-
The lubricant of life: A proposal that solvent water promotes extremely fast conformational fluctuations in mobile heteropolypeptide structure
-
Barron LD, Hecht L, Wilson G. The lubricant of life: a proposal that solvent water promotes extremely fast conformational fluctuations in mobile heteropolypeptide structure. Biochemistry 1997;36:13143-13147.
-
(1997)
Biochemistry
, vol.36
, pp. 13143-13147
-
-
Barron, L.D.1
Hecht, L.2
Wilson, G.3
-
24
-
-
0029937037
-
Structural analysis of a substrate binding by the molecular chaperone DnaK
-
Zhu X, Zhao X, Burkholder WF, Gragerov A, Ogata CM, Gottesman ME, Hendrickson WA. Structural analysis of a substrate binding by the molecular chaperone DnaK. Science 1996;272:1606-1614.
-
(1996)
Science
, vol.272
, pp. 1606-1614
-
-
Zhu, X.1
Zhao, X.2
Burkholder, W.F.3
Gragerov, A.4
Ogata, C.M.5
Gottesman, M.E.6
Hendrickson, W.A.7
-
25
-
-
0026006843
-
The role of heat-shock and chaperone proteins in protein folding: Possible molecular mechanisms
-
Hubbard TJP, Sander C. The role of heat-shock and chaperone proteins in protein folding: possible molecular mechanisms. Protein Eng 1991;4:711-717.
-
(1991)
Protein Eng
, vol.4
, pp. 711-717
-
-
Hubbard, T.J.P.1
Sander, C.2
-
26
-
-
0030006212
-
Chaperonin-facilitated protein-folding: Optimization of rate by an iterative annealing mechanism
-
Todd MJ, Lorimer GH, Thirumalai D. Chaperonin-facilitated protein-folding: optimization of rate by an iterative annealing mechanism. Proc Natl Acad Sci USA 1996;93:4030-4035.
-
(1996)
Proc Natl Acad Sci USA
, vol.93
, pp. 4030-4035
-
-
Todd, M.J.1
Lorimer, G.H.2
Thirumalai, D.3
-
27
-
-
0002617993
-
A simple model of chaperonin-mediated protein folding
-
Chan HS, Dill KA. A simple model of chaperonin-mediated protein folding. Proteins 1996;24:345-351.
-
(1996)
Proteins
, vol.24
, pp. 345-351
-
-
Chan, H.S.1
Dill, K.A.2
-
28
-
-
0028023724
-
Statistical mechanics of kinetic proofreading in protein folding in vivo
-
Gulukota K, Wolynes PG. Statistical mechanics of kinetic proofreading in protein folding in vivo. Proc Natl Acad Sci USA 1994;91:9292-9296.
-
(1994)
Proc Natl Acad Sci USA
, vol.91
, pp. 9292-9296
-
-
Gulukota, K.1
Wolynes, P.G.2
-
29
-
-
0029837424
-
A thermodynamic coupling mechanism for GroEL-mediated unfolding
-
Walter S, Lorimer GH, Schmid FX. A thermodynamic coupling mechanism for GroEL-mediated unfolding. Proc Natl Acad Sci USA 1996;93:9425-9430.
-
(1996)
Proc Natl Acad Sci USA
, vol.93
, pp. 9425-9430
-
-
Walter, S.1
Lorimer, G.H.2
Schmid, F.X.3
-
30
-
-
0028902892
-
Phosphorescence reveals a continued slow annealing of the protein core following reactivation of Escherichia coli alkaline phosphatase
-
Subramaniam V, Bergenhem NCH, Gafni A, Steel DG. Phosphorescence reveals a continued slow annealing of the protein core following reactivation of Escherichia coli alkaline phosphatase. Biochemistry 1995;34:1133-1136.
-
(1995)
Biochemistry
, vol.34
, pp. 1133-1136
-
-
Subramaniam, V.1
Bergenhem, N.C.H.2
Gafni, A.3
Steel, D.G.4
-
32
-
-
0029009727
-
The molecular chaperonin cpn60 displays local flexibility that is reduced after binding with an unfolded protein
-
Gorovits BM, Horowitz PM. The molecular chaperonin cpn60 displays local flexibility that is reduced after binding with an unfolded protein. J Biol Chem 1995;270:13057-13062.
-
(1995)
J Biol Chem
, vol.270
, pp. 13057-13062
-
-
Gorovits, B.M.1
Horowitz, P.M.2
-
33
-
-
0029127242
-
Binding of defined regions of a polypeptide to GroEL and its implications for chaperonin-mediated protein folding
-
Hlodan R, Tempst P, Hartl F-U. Binding of defined regions of a polypeptide to GroEL and its implications for chaperonin-mediated protein folding. Nature Struct Biol 1995;2:587-595.
-
(1995)
Nature Struct Biol
, vol.2
, pp. 587-595
-
-
Hlodan, R.1
Tempst, P.2
Hartl, F.-U.3
-
34
-
-
0030804446
-
Distinct actions of cis and trans ATP within the double ring of the chaperonin GroEL
-
Rye HS, Burston SG, Fenton WA, Beechem JM, Xu Z, Sigler PB, Horwich AL. Distinct actions of cis and trans ATP within the double ring of the chaperonin GroEL. Nature 1997;388:792-798.
-
(1997)
Nature
, vol.388
, pp. 792-798
-
-
Rye, H.S.1
Burston, S.G.2
Fenton, W.A.3
Beechem, J.M.4
Xu, Z.5
Sigler, P.B.6
Horwich, A.L.7
-
35
-
-
0033524418
-
EPR mapping of interactions between spin-labeled variants of human carbonic anhydrase II and GroEL: Evidence for increased flexibility of the hydrophobic core by the interaction
-
Persson M, Hammarström P, Lindgren M, Jonsson B-H, Svensson M, Carlsson U. EPR mapping of interactions between spin-labeled variants of human carbonic anhydrase II and GroEL: evidence for increased flexibility of the hydrophobic core by the interaction. Biochemistry 1999;38:432-441.
-
(1999)
Biochemistry
, vol.38
, pp. 432-441
-
-
Persson, M.1
Hammarström, P.2
Lindgren, M.3
Jonsson, B.-H.4
Svensson, M.5
Carlsson, U.6
-
36
-
-
0032483027
-
Osmolyte-driven contraction of a random coil protein
-
Qu Y, Bolen CL, Bolen DW. Osmolyte-driven contraction of a random coil protein. Proc Natl Acad Sci USA 1998;95:9268-9273.
-
(1998)
Proc Natl Acad Sci USA
, vol.95
, pp. 9268-9273
-
-
Qu, Y.1
Bolen, C.L.2
Bolen, D.W.3
-
37
-
-
0033617534
-
Chaperonin function: Folding by forced unfolding
-
Shtilerman M, Lorimer GH, Englander SW. Chaperonin function: folding by forced unfolding. Science 1999;284:822-825.
-
(1999)
Science
, vol.284
, pp. 822-825
-
-
Shtilerman, M.1
Lorimer, G.H.2
Englander, S.W.3
-
38
-
-
0028260023
-
Destabilization of the complete protein secondary structure on binding to the chaperone GroEL
-
Zahn R, Spitzfaden C, Ottiger M, Würtlich K, Plückthun A. Destabilization of the complete protein secondary structure on binding to the chaperone GroEL. Nature 1994;368:261-265.
-
(1994)
Nature
, vol.368
, pp. 261-265
-
-
Zahn, R.1
Spitzfaden, C.2
Ottiger, M.3
Würtlich, K.4
Plückthun, A.5
-
39
-
-
0028670568
-
Conformation of GroEL-bound α-lactalbumin probed by mass spectrometry
-
Robinson CV, Gross M, Eyles SJ, Ewbank JJ, Mayhew M, Hartl FU, Dobson CM, Radford SE. Conformation of GroEL-bound α-lactalbumin probed by mass spectrometry. Nature 1994;372:646-651.
-
(1994)
Nature
, vol.372
, pp. 646-651
-
-
Robinson, C.V.1
Gross, M.2
Eyles, S.J.3
Ewbank, J.J.4
Mayhew, M.5
Hartl, F.U.6
Dobson, C.M.7
Radford, S.E.8
-
40
-
-
0029861712
-
β-lactamase binds to GroEL in a conformation highly protected against hydrogen/ deuterium exchange
-
Gervasoni P, Staudenmann W, James P, Gehring P, Plückthun A. β-lactamase binds to GroEL in a conformation highly protected against hydrogen/ deuterium exchange. Proc Natl Acad Sci USA 1996;93:12189-12194.
-
(1996)
Proc Natl Acad Sci USA
, vol.93
, pp. 12189-12194
-
-
Gervasoni, P.1
Staudenmann, W.2
James, P.3
Gehring, P.4
Plückthun, A.5
-
41
-
-
0030061845
-
Catalysis of amide proton exchange by the molecular chaperones GroEL and SecB
-
Zahn R, Perrett S, Stenberg G, Fersht AR. Catalysis of amide proton exchange by the molecular chaperones GroEL and SecB. Science 1996;271:642-645.
-
(1996)
Science
, vol.271
, pp. 642-645
-
-
Zahn, R.1
Perrett, S.2
Stenberg, G.3
Fersht, A.R.4
-
42
-
-
0031030036
-
Native-like structure of a protein-folding intermediate bound to the chaperonin model
-
Goldberg MS, Zhang J, Sondek S, Matthews CR, Fox RO, Horwich AL. Native-like structure of a protein-folding intermediate bound to the chaperonin model. Proc Natl Acad Sci USA 1997;94:1080-1085.
-
(1997)
Proc Natl Acad Sci USA
, vol.94
, pp. 1080-1085
-
-
Goldberg, M.S.1
Zhang, J.2
Sondek, S.3
Matthews, C.R.4
Fox, R.O.5
Horwich, A.L.6
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